Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03982 GCTCTTCTGTTTTTTTTTTTTTTCTCTCTCTCTCTTTTCTCTCTCTGAATTCTTTGTGATGGTGCCCTAGATCCATGGCTTCTCTGTGCAACCTTTGCATGTGTTTCACTATTGCTGAGTTTCAACGTTACCCTTTTTCCTCTCTTCGTGTCTGGGTCCTGGGAAAGCCTTTCTGTGGGTCCCACATTCACACATTTGCATACTCACTTCCACACAAAAGCTTGTTGTAACTTGTGAACACCTTCCAGTTAGTATTTCACGCTCTCTTAGTGCTAAATTTGCGAACTTTGATGCTTCCCGGATCATAAATCACCGGTATTTCATTGGGTAAATCATTCCACTGTGTAAAAAAGTGTGTGTGTGTGTGTTTTTTGTTATTACTGTTTTTAAGATTTCTGAGGTTGGGTTGGTTGTGAACTGTTTGGCAAGGTTATTGTGGGTTGAGTGATCTGAGATCACATTTGGGGTTATTTGATTATTGGGTTACTGTTTTAATTATTGTGACTATTACAATTTGTGTGTTTGTGTGTGTGAGTAATATTGGTGGTTATGGGGGAGTGAAGTGAAGATGACTATTCTAGGATAGTACTATGGGAATGTAATTGGAAGGGTGAGAAGATTTGAGATTGAAACTTGGTTTTTGTGGGAGTGGATTGTTTGTTTGTTGTGCATAATGGGTGGTGTCTGTTGCAAGCCCTCTGCCATTGAGGATAGCAAGGAGAGTCCAAGAGAGCGATTTTCGATAAAGGCGGTTTCCTTGGACTCTCGTGCGTCGAGGGGTGCTTCCTTGAGGAGGGAGGAGGCATATAGGGTGAAGGATAGATATGATGGTAATGATGTGAGGACTGCTTTGATTGATAAGCAAGGGAACGGTTCTACCCGGTTGCAAGGCAATAATGTGGAAAGGAAGAGGGAGAGAATGGAGAGTGTTGTTGCTGCTCAACAACATCCAGGGGCTGGTAGCGTTCCCAAGGCCATGGAAGGGGAGCAGGTTGCAGCTGGATGGCCATCCTGGCTGGCTGCAGTGGCTGGAGAGGCTATCAAGGGATGGTTGCCACGTCGAGCCGAATCATTTGAGAAGTTAGATAAAATTGGACAGGGAACTTATAGTAATGTTTATAGGGCTCGTGATCTTGAGCAAAACAAAATTGTTGCTTTGAAAAAAGTGAGGTTTGATAATCTTGAGCCAGAGAGTGTTCGCTTCATGGCAAGGGAAATTCACATTCTACGTAGGCTTGATCATCCAAATGTCATAAAACTGGAAGGGCTGGTTACATCAAGGATGTCTTGCAGCTTATACCTAGTTTTTGAATACATGGAACATGATTTGGCTGGGCTTGCATCACATCCTGGACTGAAGTTTACAGAAGCGCAGGTAAAATGTTACATGCAGCAACTTTTACGTGGACTTGACCACTGCCACAGCTGTGGTGTGCTGCACCGTGACATTAAGGGTTCCAACCTTTTGATTGACAACAATGGAATCTTGAAGATTGCAGATTTAGGTTTGGCAAGTGTTGTTGATGCAAATCAAACTCAGCCTATGACAAGCCGAGTTGTCACTCTTTGGTATCGCCCACCTGAGCTTTTGCTTGGTGCCACGCACTATGGCACTGCTGTAGATTTATGGAGTACAGGTTGTATACTTGCTGAGCTGTATGCTGGCAAACCTATAATGCCTGGAAGAACTGAGGTGGAGCAATTACATAAAATTTTTAAACTTTGTGGTTCTCCTTCTGAGGACTATTGGAGAAAATCAAAGTTGCCTCATGCAACAATATTTAAGCCCCAGAGGCCCTATAGGCGTTGTGTTGCCGACACATTTAAGGATTTCCCTGCACCTGCTTTAGCACTCTTGGAGACTCTTTTGTCAGTAGATCCTGCAGATCGTGGAACTGCAGAGTCTGCTTTGAAGACTGAGTTCTTCACAACAAGGCCTCTACCATGTGATCCATTGAGTTTGCCAAAGTATCCTCCTAGCAAAGAATTTGATGCCAAGCTACGGGATGAAGCAAGAAGACAAGGGGCAACAGGAAGTAAGGACCAGAGACATGACCTTGAAAGAAGAGGCACAAGAGAGTCTCGAGCTGTTCCTGCACCTGACGCCAATGCTGAACTGCCACTGTCTATGCAGAAGAGACAAAGTCAGGCTCAATCTAAAAGCAGAAGTGAGAAGTTTAATCCTCATCCTGAAGAAGCTTCTGGATTTCCCATTGATCCCCCTAGATCATCACAGACTGTAGAAGTAGGCTTAGAGCCTCAGATACCACAACATAAAAGAGCCTCTCATTCTGGTCCGCTGGCTCACCGCACTGCATGGGCTAAAGCTGGGAAGAACGAGGATGATGCTCCAAAGATTTCAGTTGGGGGCGATCTATCAACAATCTCAGGCTTAGTTGCAGCAAGGAGTATGTTGTCAGATGATCGCAGAGAAAGATCTGGATCGTCAAAAATGGAGGCTTCCAAATTAATGAACAGGTTCCCAGGATCATTCAAGGATGTTTCTGAATCTTCGATACAACAGGATCATAGGCATCATGTACAGGGCCAAGTTGGTTATGGGTCAAAGGGTCATAAAATTCATTACTCTGGTCCATTGATAGTTCCATCTAGCAACATGGATCAGGTGTTGAAAGACCACGACCGCCAAATTCAAGAGGCAGTTAGACGAGCACGTTTGGATAAGGCAAAAATGAGAAGGCTTCAAGCTGAAGGGAACCAGGCAACCAATTCATTATTTGTTTCTGGTCGTTGAGTTGCAAACAAGGCATCATAAAGAATCTTTTATTCTTTCTTAATGGAGGGGCTGTATAGGGAGAATTTATCCCTTACAAAATGCCCCCAGTGGCCGTGTTAGGTAACCTTATAGCTTAGAAACCTCTCAAATTTATCACATTTTTCTTTCAACTCACAGCTGTAATTTCTGGCATAAGCCCTATTCTTGTAAAGCTTATCAGCCTTAAGCTGTTGGAAATCTGGGAAACAATTGTGTTATGAACTTATGATAGAGTTAATATTCACTCGGAAGATGCCTATGTATATGC 3044 0.435 MGGVCCKPSAIEDSKESPRERFSIKAVSLDSRASRGASLRREEAYRVKDRYDGNDVRTALIDKQGNGSTRLQGNNVERKRERMESVVAAQQHPGAGSVPKAMEGEQVAAGWPSWLAAVAGEAIKGWLPRRAESFEKLDKIGQGTYSNVYRARDLEQNKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTEAQVKCYMQQLLRGLDHCHSCGVLHRDIKGSNLLIDNNGILKIADLGLASVVDANQTQPMTSRVVTLWYRPPELLLGATHYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQRPYRRCVADTFKDFPAPALALLETLLSVDPADRGTAESALKTEFFTTRPLPCDPLSLPKYPPSKEFDAKLRDEARRQGATGSKDQRHDLERRGTRESRAVPAPDANAELPLSMQKRQSQAQSKSRSEKFNPHPEEASGFPIDPPRSSQTVEVGLEPQIPQHKRASHSGPLAHRTAWAKAGKNEDDAPKISVGGDLSTISGLVAARSMLSDDRRERSGSSKMEASKLMNRFPGSFKDVSESSIQQDHRHHVQGQVGYGSKGHKIHYSGPLIVPSSNMDQVLKDHDRQIQEAVRRARLDKAKMRRLQAEGNQATNSLFVSGR 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03982 693 Coils Coil 660 680 - -
Pste1g03982 693 CDD STKc_CDK9_like 134 418 - -
Pste1g03982 693 SUPERFAMILY Protein kinase-like (PK-like) 129 425 IPR011009 -
Pste1g03982 693 ProSiteProfiles Protein kinase domain profile. 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03982 693 MobiDBLite consensus disorder prediction 447 524 - -
Pste1g03982 693 SMART serkin_6 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03982 693 Gene3D Transferase(Phosphotransferase) domain 1 217 457 - -
Pste1g03982 693 MobiDBLite consensus disorder prediction 1 21 - -
Pste1g03982 693 Pfam Protein kinase domain 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03982 693 MobiDBLite consensus disorder prediction 484 499 - -
Pste1g03982 693 Gene3D Phosphorylase Kinase; domain 1 121 216 - -
Pste1g03982 693 MobiDBLite consensus disorder prediction 447 471 - -
Pste1g03982 693 FunFam probable serine/threonine-protein kinase At1g54610 121 216 - -
Pste1g03982 693 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
Pste1g03982 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Pste1g03982 693 PANTHER CELL DIVISION PROTEIN KINASE 132 424 - -
Pste1g03982 693 FunFam probable serine/threonine-protein kinase At1g54610 217 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03982 Pste-Chr1 21259493 21267622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03982 126 474 Core Cell Cycle Gene Families AT5G10270 52.329 2.23e-120 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pste1g03982 Pkinase 5.3e-69 CL0016