Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03967 ACTTCAACTTCCTTAGACCGTTTAGCAGTGAGTCAATCTATCAGAGACGGTGAGACTTTGGTTTCTGCAGGAGGAATCACTGAAGTGGGTTTCTTCAGTCCTGGAAACACGACAAGACGATACTTAGGTGTATGGTTCAGAAATGTGTCCCCTTTAACAGTGGTGTGGGTGGCTAACCGAAACACACCTCTTGAGAACAACTCAGGAGTTCTCAAACTCAGTGACAAAGGGATTCTTGAGCTTCTCAATGCTTCAAACAGCACCATTTGGTCATCATCCAGCATATCAAGCAAAGAAGCATTCAGTAATCCAATTGCTTATATTTTGGATTCTGGAAATTTAGTAGTAAAAAATGTACAGCAAAGTGATAGCAAGAAAAACATCTTGTGGCAGAGTTTCGATCATTTTGGTGATACATTTATGCCCGGAATGAAGCTTGGATGGAACTTAGAGACTGGTCTAGAAAGATCTTTGTCTTGTTGGAAAAGTACTGATAACCCTGCGGAGGGAGAATATACTTCAAAAATGGACCTTAGAGGGTATCCTCAAATGATTATATTCAAGGGAGCAGATATAAAAGTAAGATCAGGGTCATGGAATGGCTTGTATATAGTTGGATATCCAGGTCCAACTCATAAAACGTCATCAAAGTTTGTGATGAATGAGAAAGAGGTGTATTATGAGTATGAGAGAGTTGATATGTCGGTTTTTAGTATGTATAGACTGAACCCTTCAGGCATAGGGCAGGGTTTGTTTTGGACAACTCAAGAAAGCACAAGGAAAGTTTATCCAATTGGGCAGCAAGATCAATGTGACAACTATGCCTTCTGTGGTGCAAATTCTATATGCAGTTATGGTGATGGCTTCCTGAAGTACACAAACATGAAATTGCCAGACACATCTTCATCATGGTTTAATGCAACCATGAACCTTGAGGAATGTCACAAGTTGTGTCTTAGCAACTGTACTTGTACAGCGTATGCAGATTTGGATATCCGTGGTGGAGATGATGTTGGAACTGGCCATGGAAACAGGAAGAAAAAGATAGTAGAAATCACTGTTGGTGTGAATACTTTTGGATTAGTCATCACGTGCTTGTGCATATTCATAATTAAAAATCCAGGGGCAGCAAGAAAATTTTACAACAAGCATTACAAAAATAAAAGGAGCATAGAAGACATTGATTTGCCAACTTTCAATTTGTCAGTCTTAGCTAATGCCACTGAAAATTTTTCAACCAAAAATAAGCTTGGAGAAGGTGGATTTGGACCAGTATACATGGGCACACTGATAGATGGGAAAGTCCTAGCTGTGAAAAGGCTTTCAAAGAAGTCAGGACAAGGGTTGGATGAGTTCAAAAATGAAGTGGCATTGATTGCTAAACTTCAACATCGTAATCTAGTAAAGCTTCTAGGTTGCTGCATAAAAGGAGAAGAAAAAATATTGATATATGAATACATGCCAAACCAAAGCTTGGACTACTTTGGGTGTTGCTCGAGGACTTTTTTATTTGCTCAAGACTCTAGACTAAGGATTATTCATAGAGATTTAAAAACTAGCAATATTTTACTAGATGCCAATTTGGATTCCAAAATATCAGACTTTGGCTTGGCTCGATCATTTTTAGGAGATCAAGTTGAGGCAAACACAAATAGAGTGGCTGGAACATATGGTTATATGTCTCCTGAATATGCGGTGCATGGACATTTTTCAGTAAAATCAGATGTCTTTAGTTATGGAGTGATTGTATTAGAGATTGTAAGCAGGAAGAAAAACACAGAATTTGCAAATTCTGAAAACTGCAATAATCTTGGGCATGCATGGAGATTATGGAGTGAAGAGAGAGCTCTAGAACTATATGATGATGTGTTAGGAGAACAATGTGTGCCCCATGAAGTCATACGATGCATACAGGTAGGTCTATTATGCGTGCAACAAAGACTAGAAGATAGACCAGACATGTCATCAGTGGTTTTAATGTTGAATGGTGATAAATTATTACCAAAGCCAAAGGTTCCTGGCTTTTACACCAAAAATGATGTTACACTTGAAGCAAATGACAAAATGTGCTTAGATATTGAACTTTCCATCACACTCTTAGATGCTAGA 2109 0.3841 TSTSLDRLAVSQSIRDGETLVSAGGITEVGFFSPGNTTRRYLGVWFRNVSPLTVVWVANRNTPLENNSGVLKLSDKGILELLNASNSTIWSSSSISSKEAFSNPIAYILDSGNLVVKNVQQSDSKKNILWQSFDHFGDTFMPGMKLGWNLETGLERSLSCWKSTDNPAEGEYTSKMDLRGYPQMIIFKGADIKVRSGSWNGLYIVGYPGPTHKTSSKFVMNEKEVYYEYERVDMSVFSMYRLNPSGIGQGLFWTTQESTRKVYPIGQQDQCDNYAFCGANSICSYGDGFLKYTNMKLPDTSSSWFNATMNLEECHKLCLSNCTCTAYADLDIRGGDDVGTGHGNRKKKIVEITVGVNTFGLVITCLCIFIIKNPGAARKFYNKHYKNKRSIEDIDLPTFNLSVLANATENFSTKNKLGEGGFGPVYMGTLIDGKVLAVKRLSKKSGQGLDEFKNEVALIAKLQHRNLVKLLGCCIKGEEKILIYEYMPNQSLDYFGCCSRTFLFAQDSRLRIIHRDLKTSNILLDANLDSKISDFGLARSFLGDQVEANTNRVAGTYGYMSPEYAVHGHFSVKSDVFSYGVIVLEIVSRKKNTEFANSENCNNLGHAWRLWSEERALELYDDVLGEQCVPHEVIRCIQVGLLCVQQRLEDRPDMSSVVLMLNGDKLLPKPKVPGFYTKNDVTLEANDKMCLDIELSITLLDAR 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03967 703 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 133 - -
Pste1g03967 703 Pfam D-mannose binding lectin 53 162 IPR001480 -
Pste1g03967 703 Pfam PAN-like domain 283 335 IPR003609 -
Pste1g03967 703 SMART serkin_6 411 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03967 703 ProSiteProfiles Protein kinase domain profile. 411 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03967 703 ProSiteProfiles PAN/Apple domain profile. 283 365 IPR003609 -
Pste1g03967 703 Gene3D Hepatocyte Growth Factor 280 342 - -
Pste1g03967 703 Pfam S-locus glycoprotein domain 195 284 IPR000858 GO:0048544
Pste1g03967 703 Pfam Protein kinase domain 412 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03967 703 Gene3D - 2 134 IPR036426 -
Pste1g03967 703 CDD PAN_AP_plant 277 335 - -
Pste1g03967 703 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 541 666 - -
Pste1g03967 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 512 524 IPR008271 GO:0004672|GO:0006468
Pste1g03967 703 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 5 652 - -
Pste1g03967 703 PIRSF SRK 284 340 IPR024171 GO:0004674
Pste1g03967 703 PIRSF SRK 502 700 IPR024171 GO:0004674
Pste1g03967 703 PIRSF SRK 1 287 IPR024171 GO:0004674
Pste1g03967 703 PIRSF SRK 335 500 IPR024171 GO:0004674
Pste1g03967 703 SUPERFAMILY alpha-D-mannose-specific plant lectins 54 167 IPR036426 -
Pste1g03967 703 Gene3D Transferase(Phosphotransferase) domain 1 490 667 - -
Pste1g03967 703 SMART blect_4 11 136 IPR001480 -
Pste1g03967 703 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 376 486 - -
Pste1g03967 703 CDD B_lectin 11 136 IPR001480 -
Pste1g03967 703 Gene3D Phosphorylase Kinase; domain 1 373 486 - -
Pste1g03967 703 SUPERFAMILY Protein kinase-like (PK-like) 393 667 IPR011009 -
Pste1g03967 703 ProSiteProfiles Bulb-type lectin domain profile. 5 129 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03967 Pste-Chr1 20930197 20940030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03967 352 679 Receptor kinase-like Gene Family AT4G23190 47.486 1.02e-100 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03967 Pkinase 5.7e-33 CL0016