Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03958 GGAACATTCTAAAACATAAAGACTATAAGACCCAGTTTGCATTTGTTTTCTTAAGTTGCAATGGCTCTCCAAGCTGCTTCCTTGGTTTCTACTTCTTTCTCTATTGCTAAAGAGGGAAAGTCTGGTGTACCTCTTAGGGACACCACAGTGTTTGGTGTTTCATTGTCAGATACTCTCAAATCTGACTTCAGCACTCCCTCTTTGACATGCAAAAGGGAGTTCCAACAAAAATTTGGCCCTGTGAGGGTCCAGTCAGTGGCAACAACCACCCCAGAAGTCACAAAGGCTTCACCAGAAGGCAAGAAAACTTTGAGGAAAGGAAGTGTTATTATCACTGGGGCTTCCTCTGGATTAGGCCTGGCCACTGCTAAGGCTTTGGCTGAGACAGGAAAGTGGCATGTGATAATGGCCTGCAGGGATTTCCTCAAAGCTGAAAGAGCAGCAAAATCTGCTGGCATTACTAAGGAAAACTACACTGTTATGCATTTGGACCTTGCCTCTCTTGATAGTGTCGAGCAATTTGTTGATAACTTCAGGCAATCAGGCAGGCCACTAGATGTGCTTGTTTGCAATGCTGCAGTTTACTTGCCAACTGCTAGGGAACCTACATACACTGCTGATGGCTTTGAACTCAGTGTTGGAACCAACCATCTGGGGCATTTCCTCCTTTCACGCCTTTTGCTTGAGGACTTGAACAAATCTGACTACCCTTCAAAGCGGTTGATCATTGTTGGCTCCATCACAGGTAACACGAACACATTGGCTGGAAATGTTCCACCGAAGGCTAACCTTGGTGACTTGAGGGGACTAGCTGGAGGCTTGAATGGACTAAACGCTTCAGCCATGATTGATGGAGGATCCTTTGATGGCGCGAAGGCATACAAGGACAGCAAAGTCTGCAACATGCTCACCATGCAAGAATTCCACAGAAGATACCATGAGGAAACTGGAATCACATTTGCTTCCCTTTATCCAGGTTGCATTGCCACAACAGGCTTGTTCAGAGAGCACATTCCCTTGTTCAGACTTCTCTTCCCTCCATTCCAACAGTTCATAACCAAGGGATTTGTCTCAGAAGAAGAATCAGGAAAGAGACTTGCACAGGTTGTGAGTGATCCAAGCCTAACAAAATCAGGTGTTTACTGGAGCTGGAACAAGGACTCAGCTTCATTTGAAAACCAATTGTCCCAAGAGGCAAGTAATGCAGATAAGGCTCGCAAGGTTTGGGAGCTTAGTGAGAAACTTGTTGGTTTGGCTTAAGTGGCACTGTGGTAGCTTCCAATATCATTCTTGATTGCGGGACATTTCTCATGGAGTTCAATAACATCTCAGAAGAGTTTAGACCCTTTGCTGATGCGTTTTTCAAATGCTTTTTCTAGCTGCTAACTCCTCTTGTCTTGATGACCACTGTCGATGAATCCAACTGAGTCCAAGTGCACATGAACTATAGAGAAATAATAACTATGCACATTGACTATGATCAATGTCATTGCCTATCTTTGGTCAGCATTTGGACTTTCTTACCCCTCTTCTAGAGTGAATTGGCTAAATATGCTAATATTTTAACCATCATTTGGAAAGAGTACGTCATAACAAGTTTAATAAAGCAATCTAGAACATTAAGCAATTTATTAATCAATATATAATCTAGTATTTAAGCCAAATTAGGATGCTTTGACCTAAAAGGAATAAGTCAAGTGGTAAAGCAAGTTTGAGTCGATTGTTAACCTTGGC 1734 0.4285 MALQAASLVSTSFSIAKEGKSGVPLRDTTVFGVSLSDTLKSDFSTPSLTCKREFQQKFGPVRVQSVATTTPEVTKASPEGKKTLRKGSVIITGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAKSAGITKENYTVMHLDLASLDSVEQFVDNFRQSGRPLDVLVCNAAVYLPTAREPTYTADGFELSVGTNHLGHFLLSRLLLEDLNKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNASAMIDGGSFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQQFITKGFVSEEESGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASNADKARKVWELSEKLVGLA 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03958 399 PRINTS Glucose/ribitol dehydrogenase family signature 163 174 IPR002347 -
Pste1g03958 399 PRINTS Glucose/ribitol dehydrogenase family signature 296 313 IPR002347 -
Pste1g03958 399 PRINTS Glucose/ribitol dehydrogenase family signature 88 105 IPR002347 -
Pste1g03958 399 NCBIfam protochlorophyllide reductase 85 399 IPR005979 GO:0016630
Pste1g03958 399 PANTHER PROTOCHLOROPHYLLIDE REDUCTASE C, CHLOROPLASTIC 1 399 IPR005979 GO:0016630
Pste1g03958 399 CDD LPOR_like_SDR_c_like 86 398 - -
Pste1g03958 399 Gene3D - 74 399 - -
Pste1g03958 399 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 84 367 IPR036291 -
Pste1g03958 399 Pfam short chain dehydrogenase 89 231 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03958 Pste-Chr1 20726002 20728815 Dispersed/Wgd