Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03957 ATGACCCGAGGCGTGGTGCTGCAAGAGCAAGACAACCACCACGATAACGACAACGACAACGACGACGCCGATTCCTGCTTCTTCCACGACTCCAACGATAGGTTACTCTCTTCTTCCTCCTGCTCCACTTCGACCTCCGACGACGACACCAACGCTCCGCAAAACGACGCCGTCGACGCTTCCTTCAATGCGTTTCCGCAATTTCCTTTTCCCACCATGTGCAGGTACCACGACTGGATCTCCGAGCCTTCTTCGCTCCCCGAACGCCGCTCACGCCTCCTCCGCCAGTTCGGTCTCCCCGCGCCGCCCTCCTCCGCCGCAATCCCCCGATCAGCGTCGTCTCATCAATGCACCGACACCTCCGCCGCGGCGGCAATTCCGCGATCGAAATCCGACAACAGCGCGGATCGCGGCGCGAAGCATTGCAAGTCCACGGTTGTTCCAATTGGGGACAATGAGAGCGGTTTTGTGGTGAGGGATGTTAATAAGTATGGTGATGGTGTGAATAGTGATAGGATTTGTGTGAGTGTGTACGAGGATGGCGGTGAGGTGGTGGCTGAGAGTGAACAGGCGTGTACGATTAGGGATTTGGACAATGGAAAGGAGTTTGTGGTGAAGGAGGATGGGGTTTGGAATGAGGTGAAGGAAGTGGGGACTGGGAGGAGGTTGACTGTAGAGGAGTTTGAGATGACGGTGGGGCATTCGCCGATTGTGCAGGAGCTGATGAGGAGGCAGAATGTGGAGGAGTGTGTGGATGCTGATGCTGATGCTGATGCTGATGCTGATGGTGACGGTGGTGGTGGTGATGATGAGGGGGATGGTGGAAAAGTGAGGAGGAAAGGGGGGTGGTTTAAGTTCATGAGTTTGAAGAGTGTTGTGGTGGGGCAGAAAGAGAGGAGGAGTGGTGATGAGAGGGATACGTCTTCGTCGGAGAAAGGGGGTGGCCGGAGGTCGAGTTCAGCCACGGATGATAGCCAAGATGGTGGTGGATTGGTTCATGGTGGGGAGAGAGTTAGGGTTAGGCAGTATGGGAAGTCATGTAAAGAGTTTACAGGGGTTTATAGGAGCCAGGAGATTCAGGCTCATGATGGATCCATTTGGTGCATTAGATTTAGTTTGGATGGGAGGTATCTTGCTAGTGCTGGTGAGGATTGTGTGATCCATGTTTGGCAGGTTGTGGAGTCCGAGAGGAAGGGTGAGTTGTTGGTGGAGAAACCTGAAGATGGGAATTTGAACATGTTGTTTCTTGTCAATGGGTCACCGGAGCCTTTGTCTCCTGGATTGGACAATAATTCGGAGAAGAAGAGAAGGGGTAGGTTGTCTGTTAGCAGAAAATCGTTGAGCTTGGACCAGTTAGTGGTGCCGGATACTGTGTTTGCACTCACTGAAAAACCTGTTTGCTCCTTTAAGGGTCATCTCAATGATGTGCTTGACCTTTCTTGGTCCAAGTCTCAGCGTTTGCTCTCATCTTCGATGGACAAAACAGTGCGGCTGTGGCATTTGTCTAGCAAGTCTTGTCTGAAAATTTTTTCACACAGTGACTATGTAACTTGCATCCAGTTTAATCCTGTTGATGATAGATACTTCATTAGTGGATCTTTGGATGCTAAAGTTCGTATATGGAGCATTCCCGATCGGCAAGTTGTTGATTGGACTGATCTACGTGAGATGGTTACAGCTGCCTGTTATATGCCTGATGGTCAGGGTGCGCTGGTTGGTACATACAGGGGCAGCTGCCATTTATATAATACATCTGAAAATAAGTTGCAACAGAAAAGTCAGATAAATTTGCAGAACAGGAGAAAGAGATCAAACCACAGGAAAATTACTGGCTTCCAGTTTGTGCCAGGAAGTTCATCTGAAGTACTCATCACTTCTTCTGATTCTCGGATTCGACTTGTTGATGGTATTGATCTGGTTCATAAGTTTAAAGGTTTTCGGAATGCAAATAGCCAAATTTCTGCCTGCCTCACAGCAAATGGTAAATATGTTGTCTCAGCTAGTGAGGATTCTCATGTATACATCTGGAAAAATGAAGCTGATTGCAGACCTAGCAGGAGTAAAGGTGTCACTGTCACTAGCACATACGAACATTTTCACTGTAAAGATGTGTCAGTGGCCATTCCTTGGCCTGGTATGGATGACACATGGGAGATGCACGATTCATATTTTGGAGAGGAACCTGAGCTTGATGATAATGGGGATGAGGTCTCATCGGCCAATCATCCTCCTACCCCTGTAGAGGAACATTTTGGTTCTGAGGGGTCACAATATGCTTCTGGTTGCAATAACAGTCCACTTCATGGAACCATTGCGAGTGCAACAGATAGCTATTTCCTTGATAGAATTTCTGCCACATGGCCTGAGGAAAAACTTCTAACTACAAGGGACCAAAGCCCTAGATTAAGTGTGGATTTATCTAATGGGGTGAATCAAAACACGTCAGCCTGGGGTATGGTGATTGTAACTGCTGGCCTTCAAGGGGAAATTAAAATTTTTCAAAATTTTGGATTGTCACTTGGTGTATAAGAGGTGATTGCGATTTGTGCCTATGAGCATGGGAGAATGAGCTGAAGATATGAACTCAATAAAGGGTAAAGTGCCTATGAGCATGGGAGAATGAGCTGAAGATATGAACTCAAGAAAGGGTAAAGGGGTGGGGCCGTTTAGTGTGTTGTTGACTTCCCCTTTCTCCATTAGTTGGTGAGGACTTGTACAGTGAGGTGTTGGGTGAGATAGTATAAGGTAAGTTCCATTTGTTTCTTGTTCTTTTACTTATCGGATGAGATGTGTTGCCATTCCAAACAAGCATTTGGGGGGAACCAAAAAAAAGAAAAAAAAGAAAAAAAAATTGGGGGAAAAACAGGGAACACAAGAGAAAAGAAAAAGAAGGCAAAACCTGGAATTTGAAAACCAGTGGATTTATTGTAATGGGAAAATGTAGAGATTAACAGGCATGGGAAAAAGCTTGTTGAATTACAAATGATGATTCTTTTACATTTGTTAATATTAGTATTGTTATGTAATTCAATTTCTTGTTCAGTGGAATCAATTTCAATAAATCAGTATAGCTCCAAATGCTAGTGCGACTAGGGCATGCTCATTGTAGAAAATTGTCTATGTAACAATTAAAATGACTTTTGTATGAC 3149 0.4595 MTRGVVLQEQDNHHDNDNDNDDADSCFFHDSNDRLLSSSSCSTSTSDDDTNAPQNDAVDASFNAFPQFPFPTMCRYHDWISEPSSLPERRSRLLRQFGLPAPPSSAAIPRSASSHQCTDTSAAAAIPRSKSDNSADRGAKHCKSTVVPIGDNESGFVVRDVNKYGDGVNSDRICVSVYEDGGEVVAESEQACTIRDLDNGKEFVVKEDGVWNEVKEVGTGRRLTVEEFEMTVGHSPIVQELMRRQNVEECVDADADADADADGDGGGGDDEGDGGKVRRKGGWFKFMSLKSVVVGQKERRSGDERDTSSSEKGGGRRSSSATDDSQDGGGLVHGGERVRVRQYGKSCKEFTGVYRSQEIQAHDGSIWCIRFSLDGRYLASAGEDCVIHVWQVVESERKGELLVEKPEDGNLNMLFLVNGSPEPLSPGLDNNSEKKRRGRLSVSRKSLSLDQLVVPDTVFALTEKPVCSFKGHLNDVLDLSWSKSQRLLSSSMDKTVRLWHLSSKSCLKIFSHSDYVTCIQFNPVDDRYFISGSLDAKVRIWSIPDRQVVDWTDLREMVTAACYMPDGQGALVGTYRGSCHLYNTSENKLQQKSQINLQNRRKRSNHRKITGFQFVPGSSSEVLITSSDSRIRLVDGIDLVHKFKGFRNANSQISACLTANGKYVVSASEDSHVYIWKNEADCRPSRSKGVTVTSTYEHFHCKDVSVAIPWPGMDDTWEMHDSYFGEEPELDDNGDEVSSANHPPTPVEEHFGSEGSQYASGCNNSPLHGTIASATDSYFLDRISATWPEEKLLTTRDQSPRLSVDLSNGVNQNTSAWGMVIVTAGLQGEIKIFQNFGLSLGV 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03957 842 MobiDBLite consensus disorder prediction 728 756 - -
Pste1g03957 842 Gene3D - 346 705 IPR015943 GO:0005515
Pste1g03957 842 SUPERFAMILY WD40 repeat-like 354 680 IPR036322 GO:0005515
Pste1g03957 842 FunFam WD repeat-containing protein 44 450 716 - -
Pste1g03957 842 MobiDBLite consensus disorder prediction 294 335 - -
Pste1g03957 842 MobiDBLite consensus disorder prediction 1 27 - -
Pste1g03957 842 Pfam WD domain, G-beta repeat 639 677 IPR001680 GO:0005515
Pste1g03957 842 Pfam WD domain, G-beta repeat 464 499 IPR001680 GO:0005515
Pste1g03957 842 Pfam WD domain, G-beta repeat 505 542 IPR001680 GO:0005515
Pste1g03957 842 Pfam WD domain, G-beta repeat 358 390 IPR001680 GO:0005515
Pste1g03957 842 MobiDBLite consensus disorder prediction 256 279 - -
Pste1g03957 842 PANTHER WD REPEAT DOMAIN 44 19 838 IPR040324 -
Pste1g03957 842 MobiDBLite consensus disorder prediction 38 57 - -
Pste1g03957 842 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 359 392 - -
Pste1g03957 842 MobiDBLite consensus disorder prediction 296 312 - -
Pste1g03957 842 MobiDBLite consensus disorder prediction 120 139 - -
Pste1g03957 842 ProSiteProfiles Trp-Asp (WD) repeats profile. 509 543 IPR001680 GO:0005515
Pste1g03957 842 ProSiteProfiles Trp-Asp (WD) repeats profile. 469 509 IPR001680 GO:0005515
Pste1g03957 842 FunFam Transducin/WD40 repeat-like superfamily protein 315 420 - -
Pste1g03957 842 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 509 543 - -
Pste1g03957 842 ProSiteProfiles Trp-Asp (WD) repeats profile. 359 400 IPR001680 GO:0005515
Pste1g03957 842 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 469 503 - -
Pste1g03957 842 PRINTS G protein beta WD-40 repeat signature 487 501 IPR020472 -
Pste1g03957 842 PRINTS G protein beta WD-40 repeat signature 529 543 IPR020472 -
Pste1g03957 842 PRINTS G protein beta WD-40 repeat signature 378 392 IPR020472 -
Pste1g03957 842 MobiDBLite consensus disorder prediction 8 27 - -
Pste1g03957 842 SMART WD40_4 462 500 IPR001680 GO:0005515
Pste1g03957 842 SMART WD40_4 544 583 IPR001680 GO:0005515
Pste1g03957 842 SMART WD40_4 596 635 IPR001680 GO:0005515
Pste1g03957 842 SMART WD40_4 636 677 IPR001680 GO:0005515
Pste1g03957 842 SMART WD40_4 352 391 IPR001680 GO:0005515
Pste1g03957 842 SMART WD40_4 503 542 IPR001680 GO:0005515
Pste1g03957 842 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 174 404 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03957 Pste-Chr1 20716380 20723304 Dispersed/Wgd