Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03952 ATGGCATTATTCAAAGGTTCTGAGGAGAATTTCAAAGGTTCAGTTCAGTCTATGAAACTTTTCCATGATGTTATCTATATAATTAAGACCACAAAGTGGACATTTCTTAAGAACACAAAGGCAGAAGAGAAAGTAATACTGAATGGAGTGACAGGCATGGCTCAACCTGGTGAAATTCTTGCCATGTTAGGTCCATCTGGAAGTGGCAAAACTACTTTGCTATCAGCATTGGGAGGTAGGCTTGGAGGGAAACTCTACGGAACCATAACTTACAATGGCAAAGCCTTGAATGCAATGAAGAGGAACACTGGTTTTGTCACACAAGATGATGTTCTCCATGCCCACTTGACTGTGACTGAAACTCTAGTGTTCACTGCTCTTCTCAGATTGCCAAACAGTTTCACCAAAAAGGAGAAAATTGAACATGCAAAATCTATTATTACTCAACTTGATTTAACCAAGTGCAAGGATAGCATCATTGGAGGGCCACTGCTGAGAGGGATTTCTGGAGGGGAGAGAAAAAGGGTTAGCATTGGACAAGAAATGCTCATAAACCCAAGCTTGTTGTTCCTTGATGAGCCAACCTCTGGCCTAGACTCAACAACTGCTAAAAGAATTGTCTCAACTTTGTCGGAGCTAGCAAATGGAGGGAGAACTGTTGTCATGACAATACATCAACCTTCAAGTAGGATGTACTGCATGTTTCACAGGGTTTTACTGCTTTCAGAAGGAAACCTACTTTATTTTGGCAAAGGGTCTGAAGCAATTGAATATTTTTCTAGTATTGGTTATGCCCCTACTATGGCCATGAACCCCTCAGACTTCCTTTTGGATCTTGCAAATGGTGTCCTCACTGATCAAGCGAATGAAGACCATGCCTTAAATAAACGCAAGTTGATTGCTGCATATAGGAACTACTTCGATGCCAAATTGAAACCAGTGCTTCATGAAAAAACTGACTGTGATAATAATCAGGGTAGATTTGAAGACAATGGCTTTGAGGAATGGCCTACAACTTGGTCACAGCAATTCTTTGTGCTTCTAAAAAGATATGTTAAAGAGAGAAAGTATGAATCATTCTCTGGCAAGAGGATTTGTCAGGTCCTCGTGGCTGCCCTTATTGCAGCTCTACTATGGTACAAGTCTGATATTTCACACTTGCAGGATCAGATTGGGCTTCTATTTTTCCTGAATGGCTTCTGGGGTAGCATGCCTCTCTTCCTTGCAATATTCACCTTCCCCCAAGAGAGAATGATGTTGGAGAAGGAGAGATCCTCTGGAATGTACAGGCTATCTTCATATTTCATGTCAAGAATGGTTGGTGACCTTCCAATGGAGCTGGTGCTTCCCACCATATTTCTTAACATAATCTATTGGATGACAGGGCTGAAAGCCAATGTGGTAAACTTCACATACACACTGCTCACTACCTTACTCAATGTGCTAGTTTCACAAGGGCTAGGCCTTGCCGTTGGTGCAATTGTACTGGATCAGAAATCAGCAACCACAATGGCCTCAGTGGTGATGCTAACTTTTGTTCTGGTTGGTGGATACTATGTTCAGCATGTGCCAAAATTTGTAGCATGGCTGAAATACTTCTCCATCAACTACCACGTATACCATCTCTTGGTGGGGTCTCAGTATGTCGCTAGTGACACATACCCATGTTCTACTGGCCAGTGTTTAGTTGCAGAATATCCTATGATTAACCAAATTGGGTTACATTTTGCAGATCAACTCATGGCTGCTTTGGCACTATCCATAATGCTAATAGGCTACAGACTTTTGGCTTATTTTGCTCTTATGAGGATTGGTGTGGCAAAGAAATTGGCGTAG 1836 0.4183 MALFKGSEENFKGSVQSMKLFHDVIYIIKTTKWTFLKNTKAEEKVILNGVTGMAQPGEILAMLGPSGSGKTTLLSALGGRLGGKLYGTITYNGKALNAMKRNTGFVTQDDVLHAHLTVTETLVFTALLRLPNSFTKKEKIEHAKSIITQLDLTKCKDSIIGGPLLRGISGGERKRVSIGQEMLINPSLLFLDEPTSGLDSTTAKRIVSTLSELANGGRTVVMTIHQPSSRMYCMFHRVLLLSEGNLLYFGKGSEAIEYFSSIGYAPTMAMNPSDFLLDLANGVLTDQANEDHALNKRKLIAAYRNYFDAKLKPVLHEKTDCDNNQGRFEDNGFEEWPTTWSQQFFVLLKRYVKERKYESFSGKRICQVLVAALIAALLWYKSDISHLQDQIGLLFFLNGFWGSMPLFLAIFTFPQERMMLEKERSSGMYRLSSYFMSRMVGDLPMELVLPTIFLNIIYWMTGLKANVVNFTYTLLTTLLNVLVSQGLGLAVGAIVLDQKSATTMASVVMLTFVLVGGYYVQHVPKFVAWLKYFSINYHVYHLLVGSQYVASDTYPCSTGQCLVAEYPMINQIGLHFADQLMAALALSIMLIGYRLLAYFALMRIGVAKKLA 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03952 611 FunFam ABC transporter G family member 22 34 262 - -
Pste1g03952 611 Gene3D - 35 262 IPR027417 -
Pste1g03952 611 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 21 597 - -
Pste1g03952 611 Pfam ABC-2 type transporter 342 547 IPR013525 GO:0016020|GO:0140359
Pste1g03952 611 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 28 268 IPR003439 GO:0005524
Pste1g03952 611 ProSitePatterns ABC transporters family signature. 168 182 IPR017871 GO:0005524|GO:0016887
Pste1g03952 611 Pfam ABC-2 type transporter 225 293 IPR043926 GO:0140359
Pste1g03952 611 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 262 IPR027417 -
Pste1g03952 611 SMART AAA_5 56 245 IPR003593 GO:0016887
Pste1g03952 611 Pfam ABC transporter 47 196 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03952 Pste-Chr1 20598154 20602125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03952 54 253 Calmodulin-binding Proteins AT2G36910 25.121 2.32e-10 62.0