Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03942 TTTTATGCAAAAGAGGAGTGGATCTCCAAGGTGAAGGATGGCCAGCACCTTCTCGAAGACGAACTTCAACTTCTTTGCGAATATGTTAAAGAGATCCTTATTGAGGAGTCAAATGTGCAGCCTGTCAACAGTCCGGTGACAGTTTGTGGTGATATTCATGGTCAGTTTCATGATTTAATGAAACTTTTCCAAACGGGGGGTCATGTGCCAGAGACAAATTACATCTTTATGGGAGACTTTGTTGATCGGGGTTACAATAGTCTTGAAGTCTTCACCATCCTTTTACTTCTAAAAGCTAGATACCCAGCTAATATCACCCTTCTACGTGGAAACCATGAAAGTAGACAACTAACACAGGTCTATGGATTTTATGACGAATGCCAGAGGAAGTATGGGAATGCTAATGCTTGGCGATATTGTACAGATGTTTTTGACTATCTTACTCTTTCTGCAATTATAGATGGAACCGTGCTTTGTGTTCATGGTGGCCTTTCTCCGGACATTCGAACAATTGATCAGATTAGGGTCATTGAGAGGAACTGTGAAATTCCTCATGAGGGGCCTTTTTGTGATCTGATGTGGAGTGATCCTGAAGATATTGAAACATGGGCAGTCAGTCCTCGTGGAGCTGGTTGGCTTTTTGGATCCCGGGTCACTTCTGAGTTCAATCACATAAACAATCTTGCTCTTGTTTGTCGAGCGCACCAACTCGTTCAAGAAGGTCTTAAGTATATGTTCCAGGATAAAGGCCTTGTAACTGTATGGTCTGCACCTAATTACTGTTACCGTTGTGGAAATGTAGCTTCTATTCTTAGTTTCAATGAAAATATGGAGAGAGAAGTTAAATTTTTTACTGAAACGGAGGAGAATAACCAGATGAGAGGCCCCAGGACAGGCGTTCCATATTTCTTATAACTTGAGGATGTTTTTCTTGAAGTATTGTAAAATTATATAGTAAATGGCTTACTATTTTTATTGGACGATGATAGTCTTGTATCGTGATTCAAATGCATTTCTTTTCTAAAGGTGGATCTTATTTTTGGCCCTAGATTTCTCAATCTTAT 1064 0.3985 FYAKEEWISKVKDGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLALVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03942 304 CDD MPP_PP2A_PP4_PP6 5 286 - -
Pste1g03942 304 SUPERFAMILY Metallo-dependent phosphatases 5 287 IPR029052 -
Pste1g03942 304 Gene3D - 2 304 IPR029052 -
Pste1g03942 304 PRINTS Serine/threonine phosphatase family signature 45 72 IPR006186 GO:0016787
Pste1g03942 304 PRINTS Serine/threonine phosphatase family signature 74 101 IPR006186 GO:0016787
Pste1g03942 304 PRINTS Serine/threonine phosphatase family signature 142 168 IPR006186 GO:0016787
Pste1g03942 304 PRINTS Serine/threonine phosphatase family signature 171 198 IPR006186 GO:0016787
Pste1g03942 304 PRINTS Serine/threonine phosphatase family signature 107 131 IPR006186 GO:0016787
Pste1g03942 304 PRINTS Serine/threonine phosphatase family signature 250 266 IPR006186 GO:0016787
Pste1g03942 304 PRINTS Serine/threonine phosphatase family signature 227 247 IPR006186 GO:0016787
Pste1g03942 304 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 5 304 IPR047129 GO:0004722
Pste1g03942 304 FunFam Serine/threonine-protein phosphatase 2 304 - -
Pste1g03942 304 ProSitePatterns Serine/threonine specific protein phosphatases signature. 108 113 IPR006186 GO:0016787
Pste1g03942 304 SMART pp2a_7 17 288 IPR006186 GO:0016787
Pste1g03942 304 Pfam Calcineurin-like phosphoesterase 45 236 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03942 Pste-Chr1 20372330 20380272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03942 44 222 Calmodulin-binding Proteins AT5G63870 37.500 1.55e-29 112