Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03919 ATGGCTTTGTGTTTTTGTAATATGCCAACCCATCTGCTAACTGGGACAGTGTTGTTGGAAAAGTCAAGAGTTGTTCAACTGGGAAGTGGGGAGAGATCGTATCACATATTTTATCAACTTTGTGCTGGATCCTCATCTGGTCTTAAAGAGAGACTGAATCTTAGAGCAGTGAGTGAATATAAATATCTAGTTCAGAGTGATTGCATGTCAATTGACGGTGTTGATGATGCCAAAAACTTTCATCAGCTGATGGAAGCACTGGAAACTGTTCAAATTTGTAAAGAAGATCAGGAGCTGATCTTTAAGATGCTTGCTGCAATACTATGGCTGGGAAATATATCTTTCCAAGTAGACAGTGAAAATCACATTGAGGTTGCTGATGATGAAGCTGTAACTACTGCTGCCCAGTTGATGGGTTGCAGTTCCCAGGAATTAATGGCAGCATTATGTACCAATAAAATCCAGTCTGATGAGGATGCTATAGTCAAAATTTTGACATTGAGTCAGGCAATTGAAAGAAGAGATGAAATTGCAAAATTCATCTATGCAAGCTTGTTTGACTGGCTACTAGAACAAATTAACAAGTCACTTCAAGTGGGTAAACAACGTACTGGGAAATCCATAAGTATCCTTGATATTTATGGTTTTCAGAATTTTCAGAAAAACAGCTTTGAACAGTTTTATATAAATTATGCCAATGAGAGGATTCAACAACATTTTAATCGGCATATTTTTAAACTTGAGCAGGAGGACTATGAATTGGATGGCATTGATTGGACTAAGGTAGATTTTGAGGACAATGAAGAGTGCTTGGATCTATTTGAGAAGAAACCTGGTCTACTCTCTTTGTTGGATGAGGAGTCAAATTTAGCCAAGGCTTCAGGTTTAACATTTGCCAACAAACTTAAGCACCACCTGGATGCTAATTCTTGCTTTAAAGGAGAAAGAGGCAGAGCTTTCAGTGTACGACACTATGCAGGGGAGGTTCTATATGATACAAATGAATTTCTAGAAAAGAACAGAGACATGTTGTCTCCTGATTCCATTCAATTCCTGTCATCGTGTAATTGTGAATTGCTGCAGTTGTTCTCCAAAATGTTTAACCAGTCTCAAAAGCAGAGTGTGGCAACAAAGTTCAAGGTAATACATAATTTCTTGAGCTTGACTAAGATTTCAAAAATGATCATGGCTTGTTACTGAAGATCCAACCATGATGATGGAAATGAACTCTTTCCTGAAAAAAACTATACAAAGAAATGGTTGAAGTGTGATGTATGTTGAGGACATAAATCTAACTAGTTTTGTACTTTTAGGATCAATTGTTCAAGTTGATGCATCAGTTGGAGAGCACCACACCTCACCTTCCTGGCATTTATGATGAAGGCCTTGTCCTACAACAGCTTAGGTGTTGTGGAGTTCTAGAAGTTGTTAAACTTTCAAGGGCTGGATATCCTACTCGAATGACTCATCAAGAATTTTCCAGAAGGTATGGGCCTTTGCTTTCTGAGACCAATGTATCACAGGATCCTTTGAGCATCTCGGTTGCTGTTTTGCAAAAATTTAGTATCCCTTCTGAAATGTACCATATTGGCTACACCAAATTGTATCTTCGAGCTGGGCAGATTGTTGTGCTGGAGAATAAGAGAAAACAGGTTTTGAAGGGAATACTTGGGATTCAAAAATGCGTCCGTGGTCATCAAGCCCGTGGTTGTTTCAGTGAACTTAAGAATGGAGTGACAACATTACAATCATTTATTCGTGGAGAAAATACAAGAAGGAAATATGGTGTTATGGTGAAGTCTTCAATAACTATTTATTGTAGAAAACTGGAGGAGATCCATGCAATCATACTATTACAATCTGTCGTCCGTGGTTGGCTGGTTAGAAGGGATGCTAGTCTTGTAAATAGGTCGAAGAAATATCCTGAAAATGCTAAACCTAGGCTGAAGTTCTTTATGAAGATAATACCAGAAGTAAAGGATTTGTCCAAAGAGCCAGTTCATAATCTGCTTTCAGCTATAGCAGAACTCCAAAGACAGGTTGATAAGGCTGATGCAATTGGGGAGCAAAAGGAAGAGGAAAATATTGAGTTGAAGGAACAGCTAAAACAATCTGAGAAAAAGAGAATTGAATATGAGGCAAAAATGAAATCAATGGAGGAGGCTTGGCAAAAACAAATGGCATCTTTGCAAATGAGTCTTGTTGCTGCAAGAAAGAGCCTGGCTCCTGAGAATGCTGCTGTTCAACCTGTAAGACATGATTTTGGGGTGCCTCGTGGTTATGATTCTGAAGATGCTGCTTCTATGGGATCTCGAACACCTGGGAGCACCCCAATGCTTTCTGGTAGTCTATCTGCATCTGATGCAGGGAGACAGGCCAATGGAACTTTGACTACAGTTGGCAATCTGATGAAGGAATTCGAACAGCGAAGACATACCTTTGATGATGAAGTAAAAGCTTTGAGTGACATTAAACCTGGGCAGTCTGCCAACACAAATTCCGTAGAAGAACTTCGGAAACTTAAACAAAGATTTGAGGGATGGAAGAACCAATACAAGGTTAGATTACGTGAGGCTAAAGCAAGGCTTTCTAAATCTGATGCAGAAAAAAGCCGGCGATCATGGTGGGGGAAGTTAAGCTCAAAAGCTTAGTGGTATTCAGTTTTCAAACTGTCTTTGCTGAGAATGAAATGCAGAAGAATCAGCTAAAAAATGGCAAAATGATTGTTCTCATGAACTTTGTCCTTTTCTGAGGAGTGGCTTCTATATCTTGCTGGAACGCTTGATTTTGTGTTACCAATTTGCTCGTTGGTGAAGGGAAAGAAATTTGTATATCAACCAATTTTGTTAACATGGTGGGAGTTTCATAGGTTGTGCATAGTGGTAGACTTGTAAGGTCGCATAGTTGTATTGGTTAGTTTGCTTTTGTATATGTTTTTCTTTTTCACTTTCTTTATTGGGGTGAACAATAGTAATGGCTCATGTATATTCTGATATTGCTGATGTGATCTAAAACTCTGTCTGAAGATATTAATGGTAAGTTTTAGTATCTTCAATGTGAAGGGAAAAAGATTTTCTTGCTGTTTTGTTGTGTTTGTGACAACAATTCTCTCTCGGTGTATTGGCTGCACAGATAAATGGTTTTTGGAATAATACATCTTTTCCC 3165 0.3858 MALCFCNMPTHLLTGTVLLEKSRVVQLGSGERSYHIFYQLCAGSSSGLKERLNLRAVSEYKYLVQSDCMSIDGVDDAKNFHQLMEALETVQICKEDQELIFKMLAAILWLGNISFQVDSENHIEVADDEAVTTAAQLMGCSSQELMAALCTNKIQSDEDAIVKILTLSQAIERRDEIAKFIYASLFDWLLEQINKSLQVGKQRTGKSISILDIYGFQNFQKNSFEQFYINYANERIQQHFNRHIFKLEQEDYELDGIDWTKVDFEDNEECLDLFEKKPGLLSLLDEESNLAKASGLTFANKLKHHLDANSCFKGERGRAFSVRHYAGEVLYDTNEFLEKNRDMLSPDSIQFLSSCNCELLQLFSKMFNQSQKQSVATKFKVIHNFLSLTKISKMIMACY 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03919 399 Pfam Myosin head (motor domain) 16 374 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste1g03919 399 Gene3D Myosin VI head, motor domain, U50 subdomain 93 371 - -
Pste1g03919 399 Gene3D - 32 91 - -
Pste1g03919 399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 380 IPR027417 -
Pste1g03919 399 SMART MYSc_2a 6 397 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste1g03919 399 FunFam Myosin heavy chain 32 88 - -
Pste1g03919 399 Gene3D - 217 381 - -
Pste1g03919 399 Gene3D Kinesin motor domain 16 216 IPR036961 -
Pste1g03919 399 ProSiteProfiles Myosin motor domain profile. 1 399 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste1g03919 399 PRINTS Myosin heavy chain signature 207 235 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste1g03919 399 PRINTS Myosin heavy chain signature 260 288 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste1g03919 399 PANTHER MYOSIN 16 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03919 Pste-Chr1 20170826 20179051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03919 16 380 Myosins gene family AT5G54280 69.761 0.0 534