Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03913 ATAGCAGTGAATAATCCAATCGCTTATGTCTTTGATTCAGGAAATTTTGTGGTGAGAAATGGACAGGAAACTACCGAAGATGATGGTGTCTTGTGGCAGAGTTTTGATTATCCGAGCCATACACATATGCCAGGAATGAAAATGGGATGGAACCTAGAGACTGGTGAGGAAACATATATATCATCATGGAAAAGTGATGATGATCCTAGTGAGGGAGAATATGTTATAAAAACTGATCTTAGAGGATATCCTCAAACAATGAAGTTGAAGGGGCATGATATAAAATCTAGAGCAGGGTCATGGAATGGCTGGTCTATAGTTGGAAATCCTGTTACAACTCTAGACCAAGGTGTATTACTGTATTTTGAGTATGAGCTTACGGATAATAAATCAATGTTCTTTGTGTATACATTGACACCTTCAGGCACAAGGCAGAGTTTATTTTGGAGAACTCAAACAAGGACCCGGCAAGTGGTCTCAACTGGGGAGGAAGATCAATGCAAGAATTACGTGTTTTGCGGTGCGAATTCTATATGCATTTATGATCGTAACCTTCCAACTTGTGAATGCTTGAGAGGATCAGGGGAATATATATCAATTTGGCTAAATGGTTGTGTTCCAAGGAATAAATCTAATTGCACAAATAGTTATACTGATGGATTCTTGAAGTACACACACGAAATTGCCAGATACATCTTGTTTGTGACCATGAACCTTGATGAATGTCAGAAGTCATGTCTTAAAAACTGTTCTTGTGCAGCATGTGCATATTTAGATATCCGCTATAGAGGAAGCGGCTGTCTACTTTGGTTTAATGATCTATCGGTGACTGATCATGTTCTGTTTCTTTTAGATAAGGCTGGCCATGGAAACATCAAGAAAAAGATAATCAAAATCGCAGTTGGTGTGATTATTTTGGGATTAGTCACATGTGCATACATATTTATAATAAAAGATCCAGATAAGTACAGGATAGAAAGTAAACTTTGCAGCAAGCATAACAAAATTAAACAGAGAAAGGAAGACACTGATTTTACAACTTTTGACTTGTCAGTGATAGCTAATATTACCGAAAACTTTCCAACCAAGATTCTAGTTCATCCACTGTCCTCTGATCTTCATTGCTTCTACAACATAATGGCTCATAGCATCATAATGTTATGTATCTTCTTATTCTCCTACATAATTACTACTTCCACTTCACTAAACAGTTTAGCAGTGAATCAATCCATCCAAGATGGTGAGAATGAGACTTTGGTTTCAGCTGATGGAGTTGTTGAAGTGGGCTTCTTCAGCCCAGGACACTCAGCAAGAAGATACTTGGGTATATGGTACACAAATGTATCCCCTTTCACAGTGGTGTGGGTGGCTAACCGAAATACACCTCTTGAGAATAAATCAGGAGTGCTCAAACTCAATGAAAAAGGGTTTCTTGTGCTTCTCAATGGCACAAACAACACTATTATTTGGTCATCATCTAACATATCAAGCATAGCAGTGACAAATCCAGTTGCTCGTCTCTTGGATTCAGGAAATTTTGTAGTGAGGAATGAAAAGGAAACTAATGAGGGTAGTATCTTATGGCAGAGTTTTGACTATCCGGGTGATACACATATGCCAGAGATGAAAATCGGATGGAACTTGGAGACAGGTCAAGAAAAATATCTATCATCTTGGAAAAGTGATGATGATCCTGCTGAGGGAGAATATGCTTTGAAAATGGACCCTAGAGGATATCCTCAATTGTTATTGTTCAAGGGACCCGATATAAAAGCGAGAGCAGGATCATGGAATGGATTTTCTCTAGTTGCAAATCCTGCTCCATCTCATGACACATCTCCTAAATTTGTGCTCAATGAAAAAGAGATGTATTATGAGTATGAGCTTCTGGATAAATCAATCTTCTTTGTATATGTATTGACCCCTTCAGGCACAGGGCAGAGTTTGTTTTGGACAAGTCAAACAAGGACCAGGCAAGTGAGCTCAACTGGGGAGCAAGATCAATGCGAGAATTATAAGTTTTGTGGTGCAAATTCTATATGCGTCTATGATGGTAACCATCCAACATGTGAATGCCTGAGAGGATATGTTCCAAAGATTCCTGCTCAGTGGAATATATCAATTTGGTCCAACGGTTGTGTTCCAAGGAAAAAATCTAACTGCACAAACAGTTCTACAGATGGCTTCTTCAAGTACTCACACATGAAATTGCCAGATACTTCTTCATCGCGGTTTGATGCAACCATGAACCTTGATGAATGTCAGAAGTCATGTCTTAAAAACTGTTCTTGTACAGCATGTGCTAATTTAGATATCCGCAATGGAGGAAGTGGCTGTCTACTTTGGTCTAATGATATGGTTGACTTGAGGAATTTCTCTAACTGGGGACAAGACTTTTATGTCAGAGTCCCTGCTTCAGAATTAGATAAAGCTGGTCATGGAAACGCCAAGAAAAAGACAATCAAAATCACAGTTGGTGTGATTATTTTTGGATTAGTCACATGTGCATGCATATTTGTAATAAAATATCCAGGAACAGCAAGAAAACTTTGCAGCAAGCAGAACAAAATTAAACAGAGAAAGGAAGACAACACTGATTTTACAACTTTTAATTTGTCCGTCATAACTAATGCTACTGAAAACTTTTCAAACAAAAACAAGCTTGGAGAAGGTGGCTTTGGAAGAGTATACAAGGGCACACTGATAGATGGACAAGAATTAGCAGTGAAAAGGCTTTCACAGAATTCTGGTCAAGGGTTAGAAGAGTTCAAAAATGAAGTTGCTTTGATTGCAAAACTTCAGCACCGTAATCTTGTAAGGATTCTGGGTTGTTGCATTGAAGGAGAAGAAAAAATGTTAATATATGAATACATGCCCAACAAAAGCTTGGACTTCTTTGTTTTTGATAAAACAAAAAAGAAGTCGCTAGATTGGCATAAGCGTTTAAACATTATTAGTGGCATTGCTCGAGGACTTTTGTATCTTCATCAAGACTCTAGGCTGAGAATTATTCACAGAGATCTTAAAACTAGCAATATTTTACTGGATGCAAATTTGGATCCTAAAATATCAGACTTTGGCTTAGCTCGATCATTTTTTGGAGATCAAGTTGAGGCGAAAACACATAGGGTGGCAGGAACATATGGATACATGCCTCCTGAGTATGCTGCACGTGGGCATTTTTCAGTGAAATCAGATGTCTTTAGTTATGGTGTGATAGTACTAGAGATTATAAGTGGGAAGAAAAATAGGGAATTTTCGGACCCAGAAAACAGCAATAATCTTCTTGGTCATGCATGGAGATTATGGACTGAAAATAGAGCACTTGAACTCCTGGATGAATTGTTAGGAGAACAATGCTTACCCTCTGAAGTCACACGATGTGTACAGGTAGGCCTATTATGTGTGCAGCAAAAACCAAAAGATAGGCCAGATATGTCATCAGTGGTTTTGATGTTGAATGGTGAAAAATTATTACCAAAGCCAAAGGTTCCTGGTTTTTATGCTGAACCTGATGTTACATCTGAAGCAAATTCTTCATCATCAAATAACATACTGTGGTCGGTTAACGAACTTTCAATCACAATAGCAATCCACTTTGTGGGTTCAAGTTTGTTTTACAAAGAAGAACTGTACTACACATACAGCCTCAGAAATAAATCAGGGATTTTAGGAAGGCAGAGTTATGTATGGATTGAGGAAGCTCAAACTTGGAGGATTAATGCTTCTATCAGATATGTGCCAAGAGGTAACTGTGACTACTATAATCTTTGTGGCCCTTATGAAAATAGCATCATAGGAGACTCACCAGTTTGCCAGTGCTTGCCAGGTGGGCTTAAGTATCCTGATACTAGACATTCTTGGGTCTATGAGGATCCCAACAAATGCAGGAAAAATTGCTTTGCAAACTGTTCCTGTTCAGCTTATGCAAATTCAGATATAAGAGGTGGAGGTAGCGATTGTTTGCTATTATTTTGTGACCTTAAGGGACATGAGACAATTTTC 4005 0.3833 IAVNNPIAYVFDSGNFVVRNGQETTEDDGVLWQSFDYPSHTHMPGMKMGWNLETGEETYISSWKSDDDPSEGEYVIKTDLRGYPQTMKLKGHDIKSRAGSWNGWSIVGNPVTTLDQGVLLYFEYELTDNKSMFFVYTLTPSGTRQSLFWRTQTRTRQVVSTGEEDQCKNYVFCGANSICIYDRNLPTCECLRGSGEYISIWLNGCVPRNKSNCTNSYTDGFLKYTHEIARYILFVTMNLDECQKSCLKNCSCAACAYLDIRYRGSGCLLWFNDLSVTDHVLFLLDKAGHGNIKKKIIKIAVGVIILGLVTCAYIFIIKDPDKYRIESKLCSKHNKIKQRKEDTDFTTFDLSVIANITENFPTKILVHPLSSDLHCFYNIMAHSIIMLCIFLFSYIITTSTSLNSLAVNQSIQDGENETLVSADGVVEVGFFSPGHSARRYLGIWYTNVSPFTVVWVANRNTPLENKSGVLKLNEKGFLVLLNGTNNTIIWSSSNISSIAVTNPVARLLDSGNFVVRNEKETNEGSILWQSFDYPGDTHMPEMKIGWNLETGQEKYLSSWKSDDDPAEGEYALKMDPRGYPQLLLFKGPDIKARAGSWNGFSLVANPAPSHDTSPKFVLNEKEMYYEYELLDKSIFFVYVLTPSGTGQSLFWTSQTRTRQVSSTGEQDQCENYKFCGANSICVYDGNHPTCECLRGYVPKIPAQWNISIWSNGCVPRKKSNCTNSSTDGFFKYSHMKLPDTSSSRFDATMNLDECQKSCLKNCSCTACANLDIRNGGSGCLLWSNDMVDLRNFSNWGQDFYVRVPASELDKAGHGNAKKKTIKITVGVIIFGLVTCACIFVIKYPGTARKLCSKQNKIKQRKEDNTDFTTFNLSVITNATENFSNKNKLGEGGFGRVYKGTLIDGQELAVKRLSQNSGQGLEEFKNEVALIAKLQHRNLVRILGCCIEGEEKMLIYEYMPNKSLDFFVFDKTKKKSLDWHKRLNIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDANLDPKISDFGLARSFFGDQVEAKTHRVAGTYGYMPPEYAARGHFSVKSDVFSYGVIVLEIISGKKNREFSDPENSNNLLGHAWRLWTENRALELLDELLGEQCLPSEVTRCVQVGLLCVQQKPKDRPDMSSVVLMLNGEKLLPKPKVPGFYAEPDVTSEANSSSSNNILWSVNELSITIAIHFVGSSLFYKEELYYTYSLRNKSGILGRQSYVWIEEAQTWRINASIRYVPRGNCDYYNLCGPYENSIIGDSPVCQCLPGGLKYPDTRHSWVYEDPNKCRKNCFANCSCSAYANSDIRGGGSDCLLLFCDLKGHETIF 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03913 1335 ProSitePatterns Protein kinases ATP-binding region signature. 888 910 IPR017441 GO:0005524
Pste1g03913 1335 SMART serkin_6 882 1153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03913 1335 CDD STKc_IRAK 888 1155 - -
Pste1g03913 1335 Pfam S-locus glycoprotein domain 120 193 IPR000858 GO:0048544
Pste1g03913 1335 Pfam S-locus glycoprotein domain 593 699 IPR000858 GO:0048544
Pste1g03913 1335 Pfam S-locus glycoprotein domain 1212 1277 IPR000858 GO:0048544
Pste1g03913 1335 ProSiteProfiles Bulb-type lectin domain profile. 404 528 IPR001480 -
Pste1g03913 1335 SMART ntp_6 216 296 IPR003609 -
Pste1g03913 1335 SMART ntp_6 724 803 IPR003609 -
Pste1g03913 1335 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 388 1143 - -
Pste1g03913 1335 CDD B_lectin 414 534 IPR001480 -
Pste1g03913 1335 FunFam Os04g0303100 protein 443 591 - -
Pste1g03913 1335 ProSiteProfiles PAN/Apple domain profile. 213 287 IPR003609 -
Pste1g03913 1335 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 846 957 - -
Pste1g03913 1335 Gene3D Phosphorylase Kinase; domain 1 845 957 - -
Pste1g03913 1335 Gene3D Transferase(Phosphotransferase) domain 1 958 1159 - -
Pste1g03913 1335 Gene3D Hepatocyte Growth Factor 719 800 - -
Pste1g03913 1335 Pfam PAN-like domain 721 789 IPR003609 -
Pste1g03913 1335 Pfam PAN-like domain 1279 1328 IPR003609 -
Pste1g03913 1335 Pfam PAN-like domain 236 274 IPR003609 -
Pste1g03913 1335 Pfam D-mannose binding lectin 3 64 IPR001480 -
Pste1g03913 1335 Pfam D-mannose binding lectin 452 560 IPR001480 -
Pste1g03913 1335 SUPERFAMILY alpha-D-mannose-specific plant lectins 4 69 IPR036426 -
Pste1g03913 1335 ProSiteProfiles EGF-like domain profile. 665 702 IPR000742 -
Pste1g03913 1335 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 720 803 - -
Pste1g03913 1335 Pfam Protein tyrosine and serine/threonine kinase 884 1151 IPR001245 GO:0004672|GO:0006468
Pste1g03913 1335 ProSiteProfiles Protein kinase domain profile. 882 1159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03913 1335 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 397 531 - -
Pste1g03913 1335 CDD PAN_AP_plant 210 275 - -
Pste1g03913 1335 SUPERFAMILY Protein kinase-like (PK-like) 866 1165 IPR011009 -
Pste1g03913 1335 SUPERFAMILY alpha-D-mannose-specific plant lectins 453 565 IPR036426 -
Pste1g03913 1335 FunFam - 958 1162 - -
Pste1g03913 1335 CDD PAN_AP_plant 718 804 - -
Pste1g03913 1335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1003 1015 IPR008271 GO:0004672|GO:0006468
Pste1g03913 1335 ProSiteProfiles PAN/Apple domain profile. 721 804 IPR003609 -
Pste1g03913 1335 Gene3D - 397 531 IPR036426 -
Pste1g03913 1335 SMART blect_4 410 534 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03913 Pste-Chr1 20084933 20094742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03913 848 1195 Receptor kinase-like Gene Family AT4G11530 55.493 2.90e-124 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03913 PK_Tyr_Ser-Thr 9.8e-49 CL0016