Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03912 CGTGGATGGTTAGCAAATTATTTTGATTTTCTCTCTCAACTTTCTCGGAAACCAAACATCCCTTTTGTCAGAGAAATTGTTCTCTCACTCACTTCTCTATTCATTCACTTCTTCTGCAAGATCCTCTTGAGCGCTCACACCTTCATCTCCTTCTCAATTATCATGTGCTGTGCCTTCTGGATCGGTTAACAAACTTAACTAGAGCTATTATTTCAGGGAAAATGTCTGCAACATCCAAAGTCCTGCCTGCTCTCCACTCTATCAAATCGTTGCCTCCTGAGTTCAAGATTACTGCTGGTAATCTGACTTCTGGTCGAATGGAAAACTGTAGAGATGCTAAGTTGAGAAGCAGTGATGGGATTGGATCAAGTAGCCCTGAAAATGATGCTCTGATGAGGGAGGTTTCTGATGAAGCTCAGAATCATGCTGGTGACCTGGGTCTTTACGATGAGGACTTAGCATACAGCAGAAAAGGTGTATCATCAGAAGACAGGTTGTCAATCGCCGATGAAGACTTAGAATCTGTTCCTTCACCTTTCCCATCAATTTCATTGTCCTCTAGGGAACGCAGGTGGAGTGATACAACACCTTACACTTCAAAAAAGAAGCTTCAGTCTTGGTTTCAACTTCCAAATGGGAATTGGGAGCTGGGGAAGATAATAACAACTTCTGGAAATGAATCCATAATTTCACTACCTGATGGGAATGTTTTGAAAGTGAAAGAAGAAAGTTTAGTACCAGCAAATCCTGATATCCTTGATGGGGTAGATGACCTCATGCAACTTAGTTATTTAAATGAACCGTCGGTTTTATACAACCTGCAATATAGATACAATCAAAACATGATTTATACAAAAGCGGGACCCGTTTTGGTTGCTATAAACCCCTTTAAGAAAGTTCCTTTATATAGTAATGACTATATTGAGGCCTACAAGCGTAAAGCTATAGAAAGCCCTCATGTATATGCAATAACAGACACAGCCATCCGAGAAATGATACGAGATGAAGTTAATCAATCTATAATTATAAGTGGAGAGAGTGGAGCAGGGAAGACTGAGACAGCAAAAATAGCAATGCAGTACTTGGCTGCCCTTGGTGGTGGAAGTGGGATTGAGTATGAGATTTTAAAGACTAATCCAATACTTGAAGCCTTTGGTAATGCTAAAACATTAAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATTCATTTTAGTGAAACTGGAAAAATCTCTGGTGCTAATATTCAAACATTTTTGCTTGAAAAGTCTAGAGTAGTCCAGTGCAATGAAGGGGAAAGATCGTATCATATATTTTACCAGTTATGTGCTGGTGCACCTCCATCTCTCAGGGGGAAGCTAAACCTACAAAATGCAGCAGACTATAAATATTTAAGGCAGAGCAATTGTTATTCAATTACTGGTGTTAATGATGCAGAAGAATTTTGCTCAGTCATGGAAGCTCTTGATGTTGTCCATGTTAGTAAAGAAGACCAGGAGAATGTATTTGCAATGCTTGCTGCAGTATTATGCTTTTGTTTGTGTCTATTCCACGTGGCCAAATTAATTGGTTGTGACGTTGAAGATCTCAAGCTGACTCTATCAACTCGCAAAATGAAAGTTGGTAATGATAATATTGTCCAAAAGTTGACACTATCACAGGCAATTGATGCAAGAGATGCTTTGGCAAAGTCAATATATGCATGCCTGTTTGATTGGTTGGTTGAACAGATAAATAAATCACTTGCTGTGGGCAAAAGACGCACTGGCAGATCAATCAGTATTCTAGATATCTACGGCTTTGAATCTTTCAATAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCAAATGAGAGATTACAACAACACTTCAATCGTCATTTATTCAAGTTAGAACAAGAGGAGTATATTCAAGATGGCATTGACTGGGCTAAAGTTGAATTTGAAGACAACCAAGACTGCCTTAATCTTTTTGAGAAGAGGCCTCTTGGGTTATTATCCCTATTAGATGAAGAGTCCACTTTTCCAAATGGCACAGATTTAACATTTGCTAACAAGCTTAAACAGCATTTGAATTCTAATTCTTCTACTTGTTCCTCCACTCAGGTAACCTATGATACGACTGGATTTCTGGAGAAGAACAGAGATCTGTTGCACTTAGATTCCATCCAACTTCTATCCTCATGCACATGTCCTCTTCCTCAAACATTTGCTTCTCATATGCTCACTCAGTCTGATAAGCCGGTAGCTGGTCCCATGCACAAGTCAGGTGGGGCAGATTCCCAAAAGCTAAGTGTTGCAACAAAATTCAAGGGTCAATTGTTCCAACTAATGCAACGATTGGAAAGCACTACTCCACATTTTATTCGCTGCATTAAACCCAATAATCTCCAATCACCTGAATCATATGAGCAACGGCTTGTTTTGCAACAGCTGAGATGCTGTGGGGTCCTGGAAGTAGTTCGAATATCAAGATCAGGCTTTCCAACAAGAATGTCTCACCAAAAGTTCGCCAGAAGATATGGTTTTCTTCTCCTTGATAATGTTGCGTCTCAGGATCCACTTAGTGTTTCAGTTGCAATTCTTCACCAGTTTAATATTTTGCCTGAGATGTATCAAGTTGGCTACACAAAACTATTTTTCCGAACGGGGCAGATTGGTGTGCTTGAAGATACTAGAAATCGAACTCTCCATGGCATTTTACGCGTACAAAGTTGTTTCAGGGGCTATCAAGTTCGTCGCTCTTTGAAGGAGCTTCATGGAGGAATCACTACTTTGCAGTCATTTATTAGAGGAGACAAAATCAGAAAGGTGTATTTAGCTTTACTCAAGAGGCATAGAGCTGCTATTATTATACAAAAGCGTGTTAAAGCAGTGTTTGCAAGAAACAGAATGAGAACTATTAGTGATGCTGCAATAGTCATACAAGCAATTATTCGTGGTTGGTTGGTCAGAAGATGCTCAGGAAATATTGGATTTTTGAAATCTGCAGACATTATGATGAAAGAGTCAGATGAAATTTTGGTCAAGTCATCTTTCCTGGCCGAATTACAGCGTCGAGTACTTAAGGCTGAAGTTTCCCTGAGAGAGAAAGAAGAGGAAAATGACATCCTTCATCAACGTCTCCAACAATATGAGAGCAGATGGTCTGAGTATGAATTGAAGATGAAGTCCATGGAAGAAGTGTGGCAGAAACAAATGAGATCCCTACAATCTAGCCTCTCAATTGCAAAGAAGAGCCTTGCTATCGATGACTCTGAAAGAAATTCAGACGCATCTGTTAATGCAAGTGATGAGCGGGATTACAGCTGGGATATAGGAGGTAATCATAAGCGCCAAGAAAGCAACGGTGCAAGATCAACGACTGCTGGTTTAAGTGTTATAAGTCGGCTGGCTGAAGAATTTGAGCATAGGAGTCAAGTATTTGGTGATGATGCCAAGTTCCTGGTTGAGGTAAAATCTGGTCAGGTAGAAGCAAGTTTGAACCCAGATCAAGAGCTTAGAAGGTTAAAACAAATGTTTGAAGCTTGGAAAAAGGATTATGGAGCAAGACTGCGTGAAACAAAAGTCGTTTTAAATAAACTTGGAAGTGAAAATGGCGCACTTGAGAAAATGAAGAAAAAGTTGTGGGGACGAAGGAACAGTACAAGGATAACTTGATTTTTTTGTTCAAATATTTTTATTGTTTTGGGTTCGGCGTTGGTCTATGCACTGTTTCCAGAGCATTGCCAACTTTATATCTGAAAGTGAGGAAAACACAATACGAAAGGTAAAAAAATAGGAGTAGTAGGAAGAGTCCAAGGATGAATGAATTTACAGTAATTGGGACGTTGGGTTAGTTATTGCTAGCCATCTTTCTTTTTTAGTAATTTTTGCATGAGTTGTTAAGTAAGATGTATACTACAAACCTTAGTGATTTGTGTATATGGTTGATGCCCATGCCTTTTTCTTGCATGTCAAATTTGTTGTGGAGGCCCAAAATGTAATACACAGTAAGCAGTTTGTTGGCTGCGCAAAAATAATTGTAAAATACGGATATTTATAGAAATTTAAAAATTGATATTCTTGTCAA 4080 0.3904 MSATSKVLPALHSIKSLPPEFKITAGNLTSGRMENCRDAKLRSSDGIGSSSPENDALMREVSDEAQNHAGDLGLYDEDLAYSRKGVSSEDRLSIADEDLESVPSPFPSISLSSRERRWSDTTPYTSKKKLQSWFQLPNGNWELGKIITTSGNESIISLPDGNVLKVKEESLVPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIYTKAGPVLVAINPFKKVPLYSNDYIEAYKRKAIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPPSLRGKLNLQNAADYKYLRQSNCYSITGVNDAEEFCSVMEALDVVHVSKEDQENVFAMLAAVLCFCLCLFHVAKLIGCDVEDLKLTLSTRKMKVGNDNIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKRPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSSTCSSTQVTYDTTGFLEKNRDLLHLDSIQLLSSCTCPLPQTFASHMLTQSDKPVAGPMHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPESYEQRLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLDNVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGYQVRRSLKELHGGITTLQSFIRGDKIRKVYLALLKRHRAAIIIQKRVKAVFARNRMRTISDAAIVIQAIIRGWLVRRCSGNIGFLKSADIMMKESDEILVKSSFLAELQRRVLKAEVSLREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERNSDASVNASDERDYSWDIGGNHKRQESNGARSTTAGLSVISRLAEEFEHRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRLKQMFEAWKKDYGARLRETKVVLNKLGSENGALEKMKKKLWGRRNSTRIT 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03912 1148 Gene3D - 827 875 - -
Pste1g03912 1148 Gene3D - 876 919 - -
Pste1g03912 1148 ProSiteProfiles IQ motif profile. 848 877 IPR000048 GO:0005515
Pste1g03912 1148 ProSiteProfiles Myosin motor domain profile. 180 823 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste1g03912 1148 Coils Coil 943 991 - -
Pste1g03912 1148 FunFam Myosin heavy chain 362 418 - -
Pste1g03912 1148 ProSiteProfiles IQ motif profile. 827 854 IPR000048 GO:0005515
Pste1g03912 1148 Pfam IQ calmodulin-binding motif 899 915 IPR000048 GO:0005515
Pste1g03912 1148 Pfam IQ calmodulin-binding motif 829 846 IPR000048 GO:0005515
Pste1g03912 1148 Gene3D - 362 418 - -
Pste1g03912 1148 Gene3D - 757 824 - -
Pste1g03912 1148 Gene3D Kinesin motor domain 179 756 IPR036961 -
Pste1g03912 1148 PANTHER MYOSIN 173 1128 - -
Pste1g03912 1148 Gene3D Myosin VI head, motor domain, U50 subdomain 419 509 - -
Pste1g03912 1148 ProSiteProfiles IQ motif profile. 897 926 IPR000048 GO:0005515
Pste1g03912 1148 CDD MYSc_Myo8 194 811 IPR036022 -
Pste1g03912 1148 PRINTS Myosin heavy chain signature 573 601 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste1g03912 1148 PRINTS Myosin heavy chain signature 264 289 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste1g03912 1148 PRINTS Myosin heavy chain signature 306 333 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste1g03912 1148 PRINTS Myosin heavy chain signature 520 548 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste1g03912 1148 PRINTS Myosin heavy chain signature 210 229 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste1g03912 1148 Pfam Myosin head (motor domain) 182 811 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste1g03912 1148 SMART MYSc_2a 174 824 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste1g03912 1148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 871 IPR027417 -
Pste1g03912 1148 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 127 176 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pste1g03912 1148 MobiDBLite consensus disorder prediction 1016 1050 - -
Pste1g03912 1148 Gene3D - 532 713 - -
Pste1g03912 1148 SMART iq_5 896 918 IPR000048 GO:0005515
Pste1g03912 1148 SMART iq_5 847 869 IPR000048 GO:0005515
Pste1g03912 1148 SMART iq_5 873 895 IPR000048 GO:0005515
Pste1g03912 1148 SMART iq_5 824 846 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03912 Pste-Chr1 20084515 20115164 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03912 6 1146 Myosins gene family AT1G50360 71.587 0.0 1682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03912 1 20084515 20115164 Pste1g03912 1 20084515 20115164 ECH