Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03908 TTCTTGTGCCCCGACAGAGACAAGAGTTAAGAAGAGAAGAGAGAGATAAAATGGAGGAGTTTTCGTGCGTGTTGTGTGAGAAGAGGGCGATGATGCTGTGTGACTCGGACCAGGCTAAGCTATGCTGGGACTGCGACGAGAAAGTTCACAGCGCTAATTTTCTGGTGGCCAAGCACTCGCGGGTTTTGCTCTGTCGCTTGTGCCACGCTCCCACTCCCTGGAAGGGCTCTGGGACCAAACTCACCCCGACGGTGTCGTTTTGCCACCGCTGCGTTGCGGATCGAAACGCCAGGTGGGAACAGTTGGTGGATGGTCAAGCCAGACGCCGTCATGATGACTGTGTCCTTCATCATCATCATCATGATGATGATGATGATGATGATGATGATGATGATGCCGCCGAACGTGTCAATGGTGATGTCTATGATGACGATAGTTATGATCATGATGATGATGAAGCAGAAGATGATGATGGCCATGAAGAAGAGGATGAGGAAGGGGATGAGAATCAAGTGGTTCCAATGTCCTCTGCTTCTGCCACGTCACCAACTAACGCTGCCGGTTTAGCATTCAAGCGATTCAGAAACAACTCTCCCTCTGTGGATTCTTCTCATGATGAGACAGCATGCTCTTCATCTGACATGCTTAGTTCTACATTGCCCAGTGGTGATGAATCAAATTCCATGAGCATATTGAAGAGGCATCGAGTTGATAAGTGAAATTAAATTATTGACCCTTGATTGAAGATTGAAGAGCTGGTGAAAGTTTGTGTTGATAAACCCAACTTGATCGAAATCTGGAGGTTTATGGTGATTTAATTACAGATTATGCTTTAGTGCTAACTCCCATCTTTTTCTTGAAATTACTTAGTTTATAGGTCAGCTTTAATTTCAGAAAAAAATGGTTTCCTTTTCCCATTCAATTTTGTACCCAATCCCATTGATAATAACTCTGTAGTCATTTCATGATATATATATGTACGTGGAGGATGTATATATTTCAAATCAAACTTTCATTTCTTT 1022 0.4354 MEEFSCVLCEKRAMMLCDSDQAKLCWDCDEKVHSANFLVAKHSRVLLCRLCHAPTPWKGSGTKLTPTVSFCHRCVADRNARWEQLVDGQARRRHDDCVLHHHHHDDDDDDDDDDDAAERVNGDVYDDDSYDHDDDEAEDDDGHEEEDEEGDENQVVPMSSASATSPTNAAGLAFKRFRNNSPSVDSSHDETACSSSDMLSSTLPSGDESNSMSILKRHRVDK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03908 222 MobiDBLite consensus disorder prediction 102 222 - -
Pste1g03908 222 MobiDBLite consensus disorder prediction 108 153 - -
Pste1g03908 222 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 208 - -
Pste1g03908 222 CDD Bbox1_BBX-like 6 47 - -
Pste1g03908 222 SMART bboxneu5 1 47 IPR000315 GO:0008270
Pste1g03908 222 MobiDBLite consensus disorder prediction 155 169 - -
Pste1g03908 222 MobiDBLite consensus disorder prediction 179 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03908 Pste-Chr1 20030655 20032703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03908 6 80 C2C2-CO-like Transcription Factor Family AT4G27310 62.667 1.40e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste1g03908 zf-B_box 4.5e-06 No_clan