Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03901 CTACCACCAGCAAAGAATTTCTGCGAATGGGGCAATCCTTGGGAAGCACAGACACTATTATTTCTCGCGGTGGGAGCTTCGAATTAGGCTTTTTCTCGCGAGTGAGAGAAAACTCCACCAAGTACTATGTAGGCATATGGAATAAAAGGGTTGCAAATGACAAGAACAAGATTGTGTGGGTTGCTAATAGAGACTATGCAGTTCAAACATCTTCAGCAGTTGTCACTATTCAATCTGATGGAAATATAGTGATCATAGATGGACCAATGACGTACCATGTAAGCAATGTTTCTTACAACTCTATTACCTATGTCAGGCTCTTGGATTCAGGAAACTTGTTACTGCTGAACAATTCCAATCAAGAAATTTTGTGGCAGAGTTTTGATAATCCTACGGATACCCTTTTACCTGGAATGAACCTAGGATATGATGATGTCTCAGGTTACACTTGGTCATTGAGATCATGGACAAGTGCAGATGACCCTGCCCTAGGAGCATTTTCCCTCAAGTTTGATTTTGGCAGGGCGAGTTTAATCGTCAACAATGGTTCTAATGTGTTCTGGATTGATGACCGTTCTAATGACAGTATAGGCAATGTTCTTGGCCGAAGTGGAGTGGAGCAGAGCAGATACAAAAGATATTTCACTTGGCCAGTTGATAGTGATTCTAGGCTGGTACTAGAAGTGTCTGGGGAGCTTAACCAGGAGTATTGGTCAGAGGAAGCTAAGGGCTGGGTTTCTATTCAGTCATCAAAGTGTGGAACCAACAATTCTTGTGGAGTTTTTTCCATTTGTAACCCGCAAGCTCTTGAGCCTTGTGACTGTCTCCCTGGTTTCCAGCCATTTGATGCAGATTCTTGGAGTAAAGGGGACAAATCTGCTGGTTGTGTCAGGAAAAAAGAGTTGTCCTGCCGTAATAGTGTTGAATCAAGTGATGGATTCAAGCAACTTAACAAAGTGCAATTACCATCAACTTTGAACAAATACAGCAGGATAAGGATTGATACAGCAAGAGGGTGTGAAAGTAATTGCTCTAGAAATTGTTCTTGTGTTGCTTATGCTTATTATTTGAACGGTAACTGCCAGTTGTGGCTTGGTCAGGTATTGAATCTAAAGAACATCTCAACATATGTAGACAATTCTGATAATTCCAATCCAATTTTTTACCTCAGACTTGCTGCCTCAGAATTGGTTACTGCTGATACATTTATGAGCCAATGCGTTTTTATGGACAATTCTTATATAAATGCAGATTCAAACGCAACAAATGGAAAAGAACCAGTGAATGATTCTAAAAAGCACAAAAACATGCAGAGGAATCTACTTTTGGTTGTTATACTGATCTCATTTCTATTATTTCTTACATTTGGCCTATTCATGTACTGGATTAGAAAGCAAACAAGAAAAGGAGATGATTTGCTACATTTAGATGTAAGTAAGAGCATGAAAGTTGAATATTCTGAGCTTAGTGAAGTACATAGTGATGAGAAAGTTAAGAAAAAGGATGTCAAGTTACCTTTGTTCAGTTTTGCGAGTGTTGCAGCAGCTACTGATAACTTCTCAGATACAAATAAACTTGGTGAAGGTGGCTTTGGACCTGGTATACTACTGAATGGGGATGAGGTTGCTGTAAAAAGACTATCACGAAGATCTTGTCAAGGATGGGAAGAGTTGAGAAATGAAGCCTTGTTAATTGCAAAACTCCAACACAACAATCTTGTTAGACTTCTAGGCTGCTGCATTGATCGAAATGAAAAGATGCTGATTTATGAATTTATGCCTAATAAAAGCTTGGATGTTTTTCTTTTTGATGCAACTAAAGGAAGGATGCTAGATTGGGGAACACGTGTTAGGATAATTGATGGGATTGCCCAAGGAATGCTTTATCTTCATCAGTATTCCAGGTTCCGAATCATTCACCGAGATTTAAAGGCTAGCAACATATTGTTAGACACCAACATGAATCCTAAAATATTAGATTTTGGAATGGCGAGGATATTTGGTGAAAATGAATTTCAAGCAAATACAAATCTAATAGTTGGAACATATGGCTACATGTCCCCTGAATATGCTATGGAAGGCGTTTTTTCTATAAAATCAGATGTATTCAGCTTTGGAGTGCTTTTATTGGAGATTGTAAGTGGCAAGAAGAATACTGGCTTTTATCAAACACATTCCTCTAGTCTTCTTGGATATGCTTGGGATCTATGGACTAGAAATTCGGTAATGGACCTAATGGATCGAGCACTGGCTGATAGTGAAACCACTAGTAGTAGTATGCACACAGCGCCAAGATTTGTGAGCATAGGACTTCTCTGCGTTCAAGAAAGTCCAGCAGATAGACCAACCATGTCTGAAGTTGTATCAATGATTGGAAATGACACTGTAACGATTCCTTCTCCTAAACCACCTGCCTTTCTAAATGTAAGAGGTTATGAATCTTCAATAGTTTCAGCCCTGCTTTGCCCGTGTATCGTTTGCGTGAATGCAATTACCTACAAAGAATTTCTTCCAATGTATCAATCCTTGGGAACCTCAGACACCCTTCTTTCTGGCAATGAAAACTTTGAACTTGGGTTTTTTTTCAGAACCAGAGAGAACACCGCCAAGTACTATATAGGTATAAGAAATAAAAAGGTTCCAAATGACAGGATTGTATGGGTTGCTAACAGAGAAGAAGGATTAAAATCTTCAGCAGTTCTTACTGTTCGACCTGATGGAAATATTGTGATCATAGATGGACCATTGGCCTACCAAGTGAGCAACGTTTCAAACAACTATATTACCTATGCCAGGCTCTTGGATTCAGGAAACCTTTTACTGCTGAACAACTCAAATCAAGAGATTTTGTGGCAGAGTTTTGATAATCCCACAGATACCCTTTTACCTGGAATGAACCTAGGATATGATGATGTCTCAGGTTATACGTGGTCTTTGAGATCATGGACAAGTGCAAACGACCCTGCCCCAGGAACTTTTTCCCTGAAGTATGATTATGGCAAAGCCAGTCTAATCATCAACAATGGTTCTAATGTGTTCTGGATTGATGATCGTTACAATGATAGTATTGACTATGTTATTAGCCGAAGTGGTGTGGAAAAATACAGAAGATATTTCACTCTGCCAGTTGGTAATGACTCTAGGCTGGTACGTAATGACTCTAGGCTGGTACTAGAGGTGTCTGGGGAGCTCAACCAGGAGTATTGGTCAGAGGAAGCAAAACGTTGGATTTCTGTTCAGTCATCCAAGTGTGGAACCAACAACTCGTGTGGAGTTTATTCCATTTGCAACCCGCAAGCTCTTGAACTTTGTGAATGTCTTGATGGCTTCAAGCCGTTTGATGCTGATTCTTTGAGGAAGGGGAATACATCCGCTGGCTGTGTCAGGAAAATTGAATTGCCCTGTAGCAACAGAAGCAGTAATAGTGCTAAATCCGATTATGGATTCTTCCAGTACAATAAAGTTCAATTACCACAAGTTTTGAACGGATACAAGAAGCTAAAGATTGATACAGCAACAGAGTGTATAAGTACTTGCTCTAGAAATTGTTCTTGTGTTGCTTGTGCTTATGATTTGAATGGCAACTGCCAGTTGTGGTATGATAAGATGTTGAGTCTAAAGAACATCTCAACATATGTGGACAATTCTGATAATACCAATCCCATATTTTACCTCAAACTTGCTGCTTCGAAATTGGTTAATGCTGATTCAAACACAACAGAAGCGAGAGAACCAGCAAATGATTTTCACAAGAATGAAAATACGCTGATGAATCTACTTTTGATTGTTATACTGATCCCATTTCTAACGTTTCTTATATTGGGCGTATTCGTTTACTGGACTAAAAGCCAAAAAAGAAAAGGAGAAGATTTGATGCATTTTGATGTAACCATGAGCATTAAAGTCGAAGATTCGGAGCTTAAAGAACCTCATAGGGGTGCAAAAGTTAAGAAGAAGGAAGTCAAGTTGCCTTTATTTAGTTTTGTGAGTGTTACAGCAGCAACTAATAATTTTTCAGATACAAATAAACTTGGTGAGGGTGGCTTTGGACCTGGTGTATTATTGAATGGGGATGAGGTTGCTGTAAAAAGGTTATCGCGAAGATCTGGTCAAGGATGGGAAGAGCTGAGAAATGAAGCCCTATTAATTGCAAAGCTCCAACACAACAATCTTGTTAGACTTCTAGGCTGCTGCATTGATCGAGATGAAAAGATGCTCATCTATGAATTTATGCCTAATAGAAGCTTGGACGTTTTCCTTTTTGATGCAACAAAAAAAAGGATGCTAGATTGGGGAACAAGAGTTAAGATAATTGAAGGGATTGCCCAAGGAATCCTTTATCTTCACCAATATTCCAGGTTCCGGATCATTCATCGCAATTTAAAAGCTAGCAACATATTGTTAGACACCGATATGAATCCTAAAATATCAGATTTTGGAATAGCAAGAATATTTGATAAGAATGAACTTCAAGCAAATACAAACCAAATAGTTGGAACATATGGTTACATGTCTCCTGAATATGCAATGGAAGGCATTTTTTCTATAAAATCGGATGTGTTTAGCTTTGGAGTACTTTTGTTGGAGATTGTAACTGGCAAGAAGAATACTGGTTTTTATCAAACAAATAGCTTCAGTCTTCTCGGATATGCTTGGGATCTATGGACAGGTAATTCAGCAATGGACCTAACGGATCCAGTACTAGATGACAGTGATACCATTAGTAGTAGTAAGCATACAGTGCCAAGATATGTGAACATAGGACTTCTCTGCATTCAAGAAAGTCCAATAGATAGACCAACCATGTCTGATGTTGTATCAATGATTGGGAATGACTCTGTGGCACTTCCTTCTCCTAAACCACCTGCATTTCTAAGTGTGAGAGGTAATCAAAATTCATTAATTCCAGGAACAAAGCCAGAAAGCTTTTCTGTGAATCTTATTACAGATACACTAGTGGAAGCAAGA 4967 0.389 MGQSLGSTDTIISRGGSFELGFFSRVRENSTKYYVGIWNKRVANDKNKIVWVANRDYAVQTSSAVVTIQSDGNIVIIDGPMTYHVSNVSYNSITYVRLLDSGNLLLLNNSNQEILWQSFDNPTDTLLPGMNLGYDDVSGYTWSLRSWTSADDPALGAFSLKFDFGRASLIVNNGSNVFWIDDRSNDSIGNVLGRSGVEQSRYKRYFTWPVDSDSRLVLEVSGELNQEYWSEEAKGWVSIQSSKCGTNNSCGVFSICNPQALEPCDCLPGFQPFDADSWSKGDKSAGCVRKKELSCRNSVESSDGFKQLNKVQLPSTLNKYSRIRIDTARGCESNCSRNCSCVAYAYYLNGNCQLWLGQVLNLKNISTYVDNSDNSNPIFYLRLAASELVTADTFMSQCVFMDNSYINADSNATNGKEPVNDSKKHKNMQRNLLLVVILISFLLFLTFGLFMYWIRKQTRKGDDLLHLDVSKSMKVEYSELSEVHSDEKVKKKDVKLPLFSFASVAAATDNFSDTNKLGEGGFGPGILLNGDEVAVKRLSRRSCQGWEELRNEALLIAKLQHNNLVRLLGCCIDRNEKMLIYEFMPNKSLDVFLFDATKGRMLDWGTRVRIIDGIAQGMLYLHQYSRFRIIHRDLKASNILLDTNMNPKILDFGMARIFGENEFQANTNLIVGTYGYMSPEYAMEGVFSIKSDVFSFGVLLLEIVSGKKNTGFYQTHSSSLLGYAWDLWTRNSVMDLMDRALADSETTSSSMHTAPRFVSIGLLCVQESPADRPTMSEVVSMIGNDTVTIPSPKPPAFLNVRGYESSIVSALLCPCIVCVNAITYKEFLPMYQSLGTSDTLLSGNENFELGFFFRTRENTAKYYIGIRNKKVPNDRIVWVANREEGLKSSAVLTVRPDGNIVIIDGPLAYQVSNVSNNYITYARLLDSGNLLLLNNSNQEILWQSFDNPTDTLLPGMNLGYDDVSGYTWSLRSWTSANDPAPGTFSLKYDYGKASLIINNGSNVFWIDDRYNDSIDYVISRSGVEKYRRYFTLPVGNDSRLVRNDSRLVLEVSGELNQEYWSEEAKRWISVQSSKCGTNNSCGVYSICNPQALELCECLDGFKPFDADSLRKGNTSAGCVRKIELPCSNRSSNSAKSDYGFFQYNKVQLPQVLNGYKKLKIDTATECISTCSRNCSCVACAYDLNGNCQLWYDKMLSLKNISTYVDNSDNTNPIFYLKLAASKLVNADSNTTEAREPANDFHKNENTLMNLLLIVILIPFLTFLILGVFVYWTKSQKRKGEDLMHFDVTMSIKVEDSELKEPHRGAKVKKKEVKLPLFSFVSVTAATNNFSDTNKLGEGGFGPGVLLNGDEVAVKRLSRRSGQGWEELRNEALLIAKLQHNNLVRLLGCCIDRDEKMLIYEFMPNRSLDVFLFDATKKRMLDWGTRVKIIEGIAQGILYLHQYSRFRIIHRNLKASNILLDTDMNPKISDFGIARIFDKNELQANTNQIVGTYGYMSPEYAMEGIFSIKSDVFSFGVLLLEIVTGKKNTGFYQTNSFSLLGYAWDLWTGNSAMDLTDPVLDDSDTISSSKHTVPRYVNIGLLCIQESPIDRPTMSDVVSMIGNDSVALPSPKPPAFLSVRGNQNSLIPGTKPESFSVNLITDTLVEAR 1647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03901 1647 Gene3D Transferase(Phosphotransferase) domain 1 1402 1606 - -
Pste1g03901 1647 Gene3D Transferase(Phosphotransferase) domain 1 584 788 - -
Pste1g03901 1647 SUPERFAMILY alpha-D-mannose-specific plant lectins 49 153 IPR036426 -
Pste1g03901 1647 FunFam Uncharacterized protein 486 583 - -
Pste1g03901 1647 ProSiteProfiles Protein kinase domain profile. 511 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03901 1647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Pste1g03901 1647 CDD STKc_IRAK 1335 1600 - -
Pste1g03901 1647 Gene3D Phosphorylase Kinase; domain 1 1303 1401 - -
Pste1g03901 1647 Gene3D Phosphorylase Kinase; domain 1 484 583 - -
Pste1g03901 1647 FunFam Os04g0303100 protein 39 178 - -
Pste1g03901 1647 FunFam Uncharacterized protein 1305 1401 - -
Pste1g03901 1647 ProSiteProfiles Bulb-type lectin domain profile. 825 945 IPR001480 -
Pste1g03901 1647 Pfam S-locus glycoprotein domain 1043 1103 IPR000858 GO:0048544
Pste1g03901 1647 Pfam S-locus glycoprotein domain 200 272 IPR000858 GO:0048544
Pste1g03901 1647 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 92 799 - -
Pste1g03901 1647 Pfam D-mannose binding lectin 49 147 IPR001480 -
Pste1g03901 1647 Pfam D-mannose binding lectin 876 973 IPR001480 -
Pste1g03901 1647 SUPERFAMILY alpha-D-mannose-specific plant lectins 876 979 IPR036426 -
Pste1g03901 1647 ProSiteProfiles Bulb-type lectin domain profile. 1 119 IPR001480 -
Pste1g03901 1647 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1402 1608 - -
Pste1g03901 1647 CDD STKc_IRAK 517 782 - -
Pste1g03901 1647 FunFam Os04g0303100 protein 867 1004 - -
Pste1g03901 1647 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 584 790 - -
Pste1g03901 1647 Pfam Protein tyrosine and serine/threonine kinase 516 781 IPR001245 GO:0004672|GO:0006468
Pste1g03901 1647 Pfam Protein tyrosine and serine/threonine kinase 1334 1599 IPR001245 GO:0004672|GO:0006468
Pste1g03901 1647 SUPERFAMILY Protein kinase-like (PK-like) 494 781 IPR011009 -
Pste1g03901 1647 ProSiteProfiles Protein kinase domain profile. 1329 1605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03901 1647 Gene3D - 821 945 IPR036426 -
Pste1g03901 1647 Gene3D - 1 119 IPR036426 -
Pste1g03901 1647 ProSiteProfiles PAN/Apple domain profile. 295 384 IPR003609 -
Pste1g03901 1647 CDD PAN_AP_plant 293 384 - -
Pste1g03901 1647 SUPERFAMILY Protein kinase-like (PK-like) 1312 1599 IPR011009 -
Pste1g03901 1647 SMART ntp_6 300 375 IPR003609 -
Pste1g03901 1647 SMART ntp_6 1135 1210 IPR003609 -
Pste1g03901 1647 SMART serkin_6 511 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03901 1647 SMART serkin_6 1329 1600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03901 1647 ProSiteProfiles PAN/Apple domain profile. 1126 1219 IPR003609 -
Pste1g03901 1647 SMART blect_4 2 122 IPR001480 -
Pste1g03901 1647 SMART blect_4 831 948 IPR001480 -
Pste1g03901 1647 Pfam PAN-like domain 1136 1196 IPR003609 -
Pste1g03901 1647 Pfam PAN-like domain 299 361 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03901 Pste-Chr1 19923237 19939750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03901 488 814 Receptor kinase-like Gene Family AT4G23250 53.571 3.54e-107 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03901 PK_Tyr_Ser-Thr 3.2e-43 CL0016