Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03900 ATGGTCTTGAAGTTCCATGAAGTATGGATGCCAGTTTTGGTGATGATTATGGTTAATTTAGCTTTGGCTTTTGTCAATATATTTCTAAAGAAGATTCTTAATGAAGGAGTGGATTACTTGACCATCCTAACATATCGACAGGCTATTTCAGCCATTTTCTTGGCACCTATTGCTTGCTTCTATGAACGGGTAACACTGACTCAGTACCTCTATCTTATTGGACTAGAATATACATCTGCCACGTTGGCATGTGCATTCCTAAATATGGTGCCTGTATTCACGTTTATTATGGCACTGCCACTGGGGATAGAGAAGGTGAACATGAAAAAGCTAAGTGCTAAGGCCAAAGTGTTGGGAACTTTAGTGTGTATTGGTGGAGCTTTGTTGTTGATCCTTTATAAAGGAATGCCCTTAATCAACCGACAACAAGAGAACATAGCAGATAATGCCACCACAAAGACACCATCAGCCTCCAAGTTAAAGATATGGATTATAGGTTCACTGCTTCTAACTGCAGGATGCCTCTTATGGTCTTCGTGGTTTCTTATACAAGAAAGGATTAGCAAAAAGTATCCATGTCAATACTCTAGCACTGCCATTTTGTCCTTTTTTGCTGCCATTCAATCCGCAATATTAACTTTGGTCATCGATCGAAATAATGCCAAATGGATTCTCAAAGGGAAGTTGGAGATAATGACTGTCGTATATGCTGGGCTGATAGGATCAGGATTGTGCTATGTGGCAATGTCATGGTGTGTGAAACAAAAGGGTCCAGTTTTTACTTCAGCATTTACGCCTCTTCTACAGATGTTCGTGGCTGTGCTTGATTTCTCTATATTACATGAAGAAATTTATCTAGGAAGTGTCGCAGGATCAGTCTTGGTTATTTCTGGCACATATATTCTACTTTGGGGTAAAAGTAAAGAGGAAGAACAATGTGTTGCGAAGGGAACTGAAGAAAGTCTGGAAGATGAAGAATGTATGAATAGTTTGGAGGCAAGTCCAAATGCTCCTTCTAAGCTAAGGCCTAATGGGAACAAGAAGTCAATGAGTTACAAGTGA 1062 0.3974 MVLKFHEVWMPVLVMIMVNLALAFVNIFLKKILNEGVDYLTILTYRQAISAIFLAPIACFYERVTLTQYLYLIGLEYTSATLACAFLNMVPVFTFIMALPLGIEKVNMKKLSAKAKVLGTLVCIGGALLLILYKGMPLINRQQENIADNATTKTPSASKLKIWIIGSLLLTAGCLLWSSWFLIQERISKKYPCQYSSTAILSFFAAIQSAILTLVIDRNNAKWILKGKLEIMTVVYAGLIGSGLCYVAMSWCVKQKGPVFTSAFTPLLQMFVAVLDFSILHEEIYLGSVAGSVLVISGTYILLWGKSKEEEQCVAKGTEESLEDEECMNSLEASPNAPSKLRPNGNKKSMSYK 353
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03900 353 MobiDBLite consensus disorder prediction 315 353 - -
Pste1g03900 353 Pfam EamA-like transporter family 165 303 IPR000620 GO:0016020
Pste1g03900 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 308 - -
Pste1g03900 353 PANTHER WAT1-RELATED PROTEIN 10 318 IPR030184 GO:0016020|GO:0022857
Pste1g03900 353 MobiDBLite consensus disorder prediction 332 353 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste1g03900 Pste-Chr1 19920048 19924178 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03900 2 311 Nodulin-like Gene Family AT1G11460 40.719 6.02e-79 243