Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03898 CTTTAAGAACAAGCAATTACTTACAAAAAAAAATGAACAGATGTCTTACAGCATTAGAATCGTAGTGTTATTTTGTTTCTTCTTTTTACCCTCCTACATGAAAACCTGCACTTCACTAGACAGCATAGCTGAGAGTCAATCTATCAGAGATGGTGATAGTTTAGTTTCAGCAAATGGAACATTTGAAGTGGGTTTCTTCAGCCCTGGGAATTCAACAGGTCGTTATGTGGGTGTGTGGTACAAGAATCTATCTCCTTTAACTGTGGTGTGGGTGGCCAACAGAGGAATACCTATCAATAATAACATAGGAGTCTTGAAACTCAATGAAGAGGGTGTTCTTGTGATTCTCAATGACAAAAACAGCACAGTTTGGAGGTCCAAGATATCAAACAAAGCAGTGAATAATCCGATTGCAGTGATCTTGGACACGGGAAATCTTGTGATAAAAAATGGAGAGGATACTAAGGAGGAGGAATTTCTGTGGCAGAGTTTTGATTATCCATGTGATACAATGATGCCAGGAATGAAGCTGGGATGGAACTTGGTCCCTGATAGATATCTTTCATCTTGGAAAAGTGAAGATGATCCAGCTAAGGGAGAGTATTCTTTAAAGATTGACACAAGGGGATATCCACAACTAATTTTAATGAAAGGATCTACTGTGAAGGTTAGAGGTGGTTCATGGAATGGCCTTGCTTTAACTGGTTATCCAACTCAACAGTTGAAGGGAAAACAACTATACAAATATGTCATGACTGCAAAAGAAGTATATCATCTTTATGAAAACCGTGATAGCATGATTGTCATATATAGTTTGAGCCCTTCAGGTATTTTGCAGGGTTTGGCTTGGACAAGCCAAACAAGTGGTCAGAAGGTTATTGCATCCTGGGGAGAAGACCGCTGCGATAATTATGCTTTTTGCGGTGCAAATTCTATGTGCAATATGTATGGTAATGTTCCGAAATGTGAATGCCTGAAAGGATATATTCCCAACTTCTCTGATGAATGGAATATATCATATTGGTCTGGTGGTTGCGTTCCAATGAATAAAGATATTTGTAGAAGCAACACTAGTTACTTCCTGAGGTACACAAACATGAAATTGCCAGATACTTCTTCGTCTTGGTTTAGTAAGACCATGAGCCTTGAGGAATGTCAAAAATTGTGTCTGAAAAACTGTTCTTGTTCAGCATATGCGAATTTAGATATCCGTGACGGAGGAAGTGGTTGTCTTCTTTGGTTTGATGATCTGGTTGACATGAGGAAGTTCAGTCTATGGGGACAAGATCTTTATATCAGAGTCCCTGCTTTGGAACTAGATAATGGTCAGGGAAACAAGAACAAAAAGATCATAGGAATCACTATTCGTGTGCTTATTTTTGGACTTGTTCTGTATGTCTCCACAATTATACACAGGAAGCAAGTAGCGGCAAGAGTAAATTATCATCTCCCACTATTTCAATGGCGAAAAGAATATTTTAGAGTGAGGAAGGAAGACATGGATCTATCAACATTTGATTTGTCAACCATTGTTAAAGCTACCAATAATTTTTCTAGCAGAAATAAACTAGGGGAAGGTGGATTTGGTCCTGTGTATAAGGATAGCCTTGAAGATGGACTAGAGATAGCTATAAAACGACACTCAAAGATGTCTGATCAAGGATTGGAGGAATTTAAAAATGAAGTTATGTTGATTGCAAAACTTCAGCACCGAAATCTTGTTAAGCTTCTTGGTTGCTGCATTCAGGGAGAGGAAAAAATGTTGATCTATGAATACATGCCTAACAAGAGCTTGGACCACTTCATCTTTGATGAAACTAGAAGCAAGCTTTTGACCTGGCATCAGCGTTACCACATTATTGATGGCATTGCTCGAGGGCTTTTATATCTTCACCAAGATTCTAGATTAAGGATTGTTCATAGAGATTTGAAAACTAGCAATATCCTACTTGATGCTTATATGAATGCAAACATATCAGACTTTGGTCTGGCTCGGACTTTTGGGGGTGATCAAATTGAAGACAATACACATAAATTGGTTGGAACATATGGTTACATGCCTCCAGAGTATGCTGCATATGGTCGTTACTCTCTGAAATCAGATGTCTTTAGTTTTGGTGTAATAGTAATAGAGATAGTCACTGGGAAGAAAAATAGGAAATTTTCTGACCCACAACTGTCTCTCAATCTTCTTGGACACGCATGGAAACTGTGGACTGAAAACAGGCCAATGGAACTGATAGATAAACATTTGGGTGAAAAATGCATGCATGTGGGTTTGTTATGTGTACAACAAAACCAGGTAGACAGGCCAGACATGGCTTCAGTCATTCTTATGCTAAATGGTGAGAAATTATTGCCCCAGCCGAAGGCTCCAGGATTTTATATTGGAAAGGATTTACCTGAATCATCACCATCATCAAGAATGTGCAATTTGTTATCCACAAATGAAATTATTACAATAGAAGTGTTATTTTGTTTCTTCTTTTTACTCTTCTACGTGAAAACCTTAACTTCACTGGAAAGTTTAGTTGTGAATCAATCTATCCGAGATGGTGAGAGTTTAGTCTCAGCAGATGGAACATTTGAAGTGGGTTTCTTCAGCCCTGGAAACTCAACAGGTCGATATGTGGGTGTGTGGTACAAGAATCTATCTCCTTTAACTGTGGTGTGGGTGGCAAACAGAGGAATACCTATCAAGAATAAATCCGGAGTCTTGAAACTCAATGAAGAGGGTGTTGTTGTGATTCTCAATGGGACAAACAGCACAGTTTGGAGGTCCAACATATCACACAAAGCAGTGAATAATCCGATTGCGCTGATCTTGGACTCAGGAAATCTTGTGATAAAAAATGGAGAGGATGCTAAGGAGGAGGAATTTCTGTGGCAGAGTTATGACTATCCATGTGATACAATGATGCCAGGAATGAAGCTTGGATGGAACTTGGTCCCTGGTCTAGATAGATATCTTTCATCTTGGAAAAGTGAAGATGATCCAGCTAAGGGAGAGTATTCTTTAAAGATTGACACAAGGGGATATCCACAACTAATTTTCTCGAAGGGGTCTATTATAAAGTTCAGATTTGGGTCATGGAATGGCGTTGCTTTAACTGGATATCCAAATCAACAGTTGAAGGGAAAGCAAAGATACAAATTTGTCATTAATGCAAAAGAAGTATATCATCTGTATGAAAACCTTGATAGCTTGATTGTCATATATAGATTGACCCCCTCAGGCATTTTGCAGGGTTTAGCTTGGACAAGCCAAGCAAGTGGTCAGAAAGTTATTACATCTGGGGGAGAAGATAATTGTGATAATTATGTTTTTTGTGGTGCAAATTCTATGTGCAATATGCTTGGTAACGTTCCAAAATGTGAATGCCTGAAAGGATATGTTCCCAACTTCCCTGATCAATGGAATATATCATATTGGTCTGATGGCTGTATTCCAATGAATAAAGAAATTTGTAAAAGCAAGACAGATCACTTCATGAGGTACACAAACATGAAATTACCAGACACTTCTTTGTCTTGGTTTAGTGAGACCATGAGCCTTGAGGAATGTCAAAAATTGTGTCTGAAAAACTGTTCTTGTTCAGCATATGCAAATTTAGATATCCGTGACGGAGGAAGTGGTTGTTTACTTTGGTTTGATGATCTGGTTGACATGAGGAGTTTCACTCAATGGGGACAAGACCTTTACGTCAGAGTCCCTGCTTCAGAGCTAGATAATGGCCAGGGAAACAAGAACAAAAAGATCGTAGGAATCACTATTGGTATTGGTATGATTATTTTTGGAATTGTTCTGTATGTCTCCTCAATGATACGCAAGAAGCAAGTGGTGGCAAGAGTAAATTATCATCTCCCCCTATTTCAATGGCGAAAAGAATATATAAGAGTGAGAAAGGAAGACATGGATCTATCAACATTTGATTTGTCAACCATTATTAAAGCTACCAATAATTTTTCTAGCAGAAATAAACTTGGGGAAGGTGGATTTGGTTCAGTGTATAAGGGTACACTGGAAGATGGACTAGAGGTAGCTATAAAGCGACACTCAAAGATGTCTTATCAAGGATTGGAGGAATTTAAAAATGAAGTTATGCTGATTGCAAAACTTCAGCACCGAAATCTTGTTAAGCTTCTTGGTTGCTGCATTCAGGAAGACGAAAAAATGTTGATCTATGAATACATGCCTAACAAGAGCTTGGACCACTTCATCTTTGATGAAACTAGAAGCAAGCTTTTGACCTGGCATCAGCGTTACCACATTATTGATGGCATTGCTCGAGGGCTTTTATATCTTCACCAAGATTCTAGATTGAGAATTGTTCATAGAGATTTGAAAACTAGCAATATCCTACTTGATGCCTATATGAATGCAAAAATCTCAGACTTTGGGCTGGCTCGGACTTTTGGGGAATATGCTGTACATGGTCATTATTCTTTGAAGTCAGATGTCTTTAGTTTTGGTGTAATTGTACTTGAAATGCTCACTGGGAAAAAAAATAGGAAGTTTTCTGACCCAGAACAGTCTCTCAATCTTCTAGGACATGCATGGAGACTCTGGACTGAAAACAGGCCAATGGAACTGATAGATAAACATTTGGATGAAAAATGCAATTTTTTTGAAGTGTTAAGATGCATGCATGTGGGTTTGTTATGTGTACAACAAAATCAGGGAGACAGGCCAGACATGGCCTCAGTCATTCTTATGTTGAATGGTGAGAAATTATTGCCTCAGCCGAAGGCTCCAGGATTTTATATTGGAAAGAGTTTACCTGAATCATCATCATCAAGAATGTGCAATTTGTTATCCACAAATGAAATGTCCCATACAATTTTTGAGGCAAGATAGAATAGAAAGACTCAA 4873 0.384 MSYSIRIVVLFCFFFLPSYMKTCTSLDSIAESQSIRDGDSLVSANGTFEVGFFSPGNSTGRYVGVWYKNLSPLTVVWVANRGIPINNNIGVLKLNEEGVLVILNDKNSTVWRSKISNKAVNNPIAVILDTGNLVIKNGEDTKEEEFLWQSFDYPCDTMMPGMKLGWNLVPDRYLSSWKSEDDPAKGEYSLKIDTRGYPQLILMKGSTVKVRGGSWNGLALTGYPTQQLKGKQLYKYVMTAKEVYHLYENRDSMIVIYSLSPSGILQGLAWTSQTSGQKVIASWGEDRCDNYAFCGANSMCNMYGNVPKCECLKGYIPNFSDEWNISYWSGGCVPMNKDICRSNTSYFLRYTNMKLPDTSSSWFSKTMSLEECQKLCLKNCSCSAYANLDIRDGGSGCLLWFDDLVDMRKFSLWGQDLYIRVPALELDNGQGNKNKKIIGITIRVLIFGLVLYVSTIIHRKQVAARVNYHLPLFQWRKEYFRVRKEDMDLSTFDLSTIVKATNNFSSRNKLGEGGFGPVYKDSLEDGLEIAIKRHSKMSDQGLEEFKNEVMLIAKLQHRNLVKLLGCCIQGEEKMLIYEYMPNKSLDHFIFDETRSKLLTWHQRYHIIDGIARGLLYLHQDSRLRIVHRDLKTSNILLDAYMNANISDFGLARTFGGDQIEDNTHKLVGTYGYMPPEYAAYGRYSLKSDVFSFGVIVIEIVTGKKNRKFSDPQLSLNLLGHAWKLWTENRPMELIDKHLGEKCMHVGLLCVQQNQVDRPDMASVILMLNGEKLLPQPKAPGFYIGKDLPESSPSSRMCNLLSTNEIITIEVLFCFFFLLFYVKTLTSLESLVVNQSIRDGESLVSADGTFEVGFFSPGNSTGRYVGVWYKNLSPLTVVWVANRGIPIKNKSGVLKLNEEGVVVILNGTNSTVWRSNISHKAVNNPIALILDSGNLVIKNGEDAKEEEFLWQSYDYPCDTMMPGMKLGWNLVPGLDRYLSSWKSEDDPAKGEYSLKIDTRGYPQLIFSKGSIIKFRFGSWNGVALTGYPNQQLKGKQRYKFVINAKEVYHLYENLDSLIVIYRLTPSGILQGLAWTSQASGQKVITSGGEDNCDNYVFCGANSMCNMLGNVPKCECLKGYVPNFPDQWNISYWSDGCIPMNKEICKSKTDHFMRYTNMKLPDTSLSWFSETMSLEECQKLCLKNCSCSAYANLDIRDGGSGCLLWFDDLVDMRSFTQWGQDLYVRVPASELDNGQGNKNKKIVGITIGIGMIIFGIVLYVSSMIRKKQVVARVNYHLPLFQWRKEYIRVRKEDMDLSTFDLSTIIKATNNFSSRNKLGEGGFGSVYKGTLEDGLEVAIKRHSKMSYQGLEEFKNEVMLIAKLQHRNLVKLLGCCIQEDEKMLIYEYMPNKSLDHFIFDETRSKLLTWHQRYHIIDGIARGLLYLHQDSRLRIVHRDLKTSNILLDAYMNAKISDFGLARTFGEYAVHGHYSLKSDVFSFGVIVLEMLTGKKNRKFSDPEQSLNLLGHAWRLWTENRPMELIDKHLDEKCNFFEVLRCMHVGLLCVQQNQGDRPDMASVILMLNGEKLLPQPKAPGFYIGKSLPESSSSRMCNLLSTNEMSHTIFEAR 1605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03898 1605 ProSiteProfiles PAN/Apple domain profile. 340 422 IPR003609 -
Pste1g03898 1605 ProSiteProfiles Protein kinase domain profile. 504 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03898 1605 ProSiteProfiles Bulb-type lectin domain profile. 26 148 IPR001480 -
Pste1g03898 1605 SUPERFAMILY Protein kinase-like (PK-like) 1293 1578 IPR011009 -
Pste1g03898 1605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1430 1442 IPR008271 GO:0004672|GO:0006468
Pste1g03898 1605 SMART serkin_6 504 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03898 1605 SMART serkin_6 1309 1536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03898 1605 FunFam Os04g0303100 protein 866 1012 - -
Pste1g03898 1605 Pfam PAN-like domain 1143 1210 IPR003609 -
Pste1g03898 1605 Pfam PAN-like domain 340 407 IPR003609 -
Pste1g03898 1605 Pfam D-mannose binding lectin 875 981 IPR001480 -
Pste1g03898 1605 Pfam D-mannose binding lectin 74 178 IPR001480 -
Pste1g03898 1605 SUPERFAMILY alpha-D-mannose-specific plant lectins 876 986 IPR036426 -
Pste1g03898 1605 SMART blect_4 833 955 IPR001480 -
Pste1g03898 1605 SMART blect_4 32 154 IPR001480 -
Pste1g03898 1605 FunFam Os04g0303100 protein 65 209 - -
Pste1g03898 1605 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 151 - -
Pste1g03898 1605 SUPERFAMILY Protein kinase-like (PK-like) 490 779 IPR011009 -
Pste1g03898 1605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Pste1g03898 1605 Gene3D Transferase(Phosphotransferase) domain 1 580 773 - -
Pste1g03898 1605 Gene3D Transferase(Phosphotransferase) domain 1 1385 1566 - -
Pste1g03898 1605 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1142 1224 - -
Pste1g03898 1605 Gene3D Hepatocyte Growth Factor 1140 1221 - -
Pste1g03898 1605 Gene3D Hepatocyte Growth Factor 338 415 - -
Pste1g03898 1605 CDD B_lectin 833 955 IPR001480 -
Pste1g03898 1605 CDD PAN_AP_plant 1143 1225 - -
Pste1g03898 1605 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 758 - -
Pste1g03898 1605 Pfam Domain of unknown function (DUF3403) 1566 1605 IPR021820 GO:0004674
Pste1g03898 1605 SMART ntp_6 1145 1224 IPR003609 -
Pste1g03898 1605 SMART ntp_6 342 421 IPR003609 -
Pste1g03898 1605 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 822 952 - -
Pste1g03898 1605 CDD STKc_IRAK 510 769 - -
Pste1g03898 1605 ProSiteProfiles PAN/Apple domain profile. 1143 1225 IPR003609 -
Pste1g03898 1605 Pfam Protein tyrosine and serine/threonine kinase 507 764 IPR001245 GO:0004672|GO:0006468
Pste1g03898 1605 Pfam Protein tyrosine and serine/threonine kinase 1312 1509 IPR001245 GO:0004672|GO:0006468
Pste1g03898 1605 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 472 579 - -
Pste1g03898 1605 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 183 IPR036426 -
Pste1g03898 1605 Gene3D Phosphorylase Kinase; domain 1 472 579 - -
Pste1g03898 1605 Gene3D Phosphorylase Kinase; domain 1 1277 1384 - -
Pste1g03898 1605 Pfam S-locus glycoprotein domain 211 318 IPR000858 GO:0048544
Pste1g03898 1605 Pfam S-locus glycoprotein domain 1013 1121 IPR000858 GO:0048544
Pste1g03898 1605 Gene3D - 823 952 IPR036426 -
Pste1g03898 1605 Gene3D - 21 151 IPR036426 -
Pste1g03898 1605 CDD B_lectin 32 154 IPR001480 -
Pste1g03898 1605 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 339 421 - -
Pste1g03898 1605 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 580 775 - -
Pste1g03898 1605 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1385 1568 - -
Pste1g03898 1605 ProSiteProfiles Protein kinase domain profile. 1309 1566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03898 1605 ProSitePatterns Protein kinases ATP-binding region signature. 1315 1337 IPR017441 GO:0005524
Pste1g03898 1605 CDD PAN_AP_plant 340 422 - -
Pste1g03898 1605 ProSiteProfiles Bulb-type lectin domain profile. 827 949 IPR001480 -
Pste1g03898 1605 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1277 1384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03898 Pste-Chr1 19897460 19910103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03898 423 801 Receptor kinase-like Gene Family AT4G23190 47.512 1.57e-111 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03898 PK_Tyr_Ser-Thr 1.5e-45 CL0016