Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03896 CCAAGGAAGAGTGAGAAGTCTTAGTTTTTTGTAAGTAACTTTTGTTGTTCAATGTTTGGTAGCAGATAGATACACTCAAGGATGGATACAATTGCGAGTGTGGCATCAAAGGTGGCTACACCTTTGATGAAACACCTCACTTATGTGTTGCTGTACAGCACTTACGTTAATGATCTAGAATCCGAGATTCAGAGGCTGCAGCATGAGGAGAAGGAGGTAAGGCACACTGTTGAGGCTGCTAAGAGGAGTGGTGAGGAGATAGAAGACACTGTGCTTGATTGGTTTGGAAGAGTGCGTGCTGCAGTGGAAGAGGGGCAAGTATTTCTTCGTGGAGAAGAGAGGGAAAGAGTTGGATGCTTAGATGTTTACTCGAGGTACACTAAGAGCCAGAGGGCTAAGAATTTGGTTGATCTTGTGAGGGAGATGAGAAGGGAAACATTTGTTCGTGTTTCTTACCGGCGTGCATTGAGATGCAATGTTAGTCCTGCTGCAAGGGAGTATGTGGAGCTGGAGTCTAGAACAGTGATGATTAAGGGCATTATGCAGGCTTGGGAGGATGTTAAGTGTGACATTGTTGGACTCTATGGAATGGCTGGCGTGGGAAAGACTGCATTGGTGAAGGAATTGGCATGGCAAGTTGAGAAGAATGGATTGTTTGATGCTGTGGTGATGGCTACTGTGAGTAGTACTCCGGACGTGGGGATGATTAGGGCTGAAATTGCTGATGGGTTGGGTTTGAAGTTTGATGAATTGACGGAGTTGGGAAGGGCGAGTAGGTTGCGCCAGAGGATTAGGCAGGAGGAGAGGATTCTTGTGATATTGGATGATGTGTGGGGGAAGCTTGAGTTGACTCAAATTGGCGTTCCTTTTGGTGAGGATCAGAGAGGTTGCAAATGCAAGTTGTTGGTGACATCTAGAGATCTTAATGTGTTGAATACTTACATTGGGGTAGATAAGGTTTACAGGGTTGAGGTTTTGTCTGAGGATGAGAGTTGGGGGTTGTTTGAGAAGAGGGGAGGGGATGCTATTAAGGATCCCAGCGTTCAACCGGTGGCCGAGAAAGTAGCGAAAAACTGTGGTGGATTGCCGCTTTTGATTGTGACAGTGGTGGAGGCGTTGAAGAACCAGGATTTGTATGCTTGGAAGGATGCACTAGAGCAGGTAACAACTTATGAACTTGAAGGGTGTTTTTATTCTCCAGTGCGTTCTGCTATTGAGAAGAGTTATGAACATTTAGAAAATCAGGAACTCAAAACTTTCTTCCTGCTTTTGGGTTCTATGGGAATTAGTTGTACCACCAGAGATTTGTTGGTGTTTGGTTGGTGCCTGGGATTGCACAATCATGTCGATACATTAGCAGATGGGAGAAACAGGCTTTACAAATTAATAGACAATCTGAGGGTTGCTTGTTTGTTACTTGATGAAGGGCAAAGAGATTCTCTTGTGGTGCTTGATGTGGTTCGACATGTGGCTGCTTATATTTCATCCAGGGTCAAACCTTTCTTTACTGTGCACAGAAACAAGGAATTAAAAGTATGGCCCAGAATGGATCTCTTAAGAACTTGTCATCATATTTTTTTGGACTGGTGTTATATCCGTGAACTTCCTGAGGTGTTAGAATGTCCCAAGTTGAAGATACTCCAGCTAAATATTCAAGGCAACTCTTTGAAAGTGCCTGATGACTTCTTTGTTCAGATGAAAGAACTTAAGGTGCTGAGTTTAGGGGGTCTAAATTGTAATCCATCGCTTCCTCCGTCTCTTGCTCTTTTGACAAACCTCCAAGCATTGTATCTGTGTAAATGCGTGTTGGAAGACATCTCTATTGTAGGTAAACTCACAGGTTTAGAGATTCTAAACCTTGAAAAATCTGAGCTTAGAGAACTCCCTGCAGTAATAGGAGGATTAAGTAATCTACGGTTGCTAGATTTGACTGATTGCTCACCACTAGAAGTAATTCCTCGCAACGTGATATTGAGCTTGACCAGCTTGGAAGAGCTCTATATGGGAAACTCTAATGTACAAGAGGAGGTCAAGGAAGGAAAAGGCCAAAGCAACGATTCAAGTCTAAGTGAGTTAAGGAATTTGCATCAACTAACAACTTTGAATGTGCAGACAGAAGATACTTCAGTTTTTCCAAGAGACTTTCTTGGCTTTGGGAGACTAGAAAACTACAAGATTTTGATTGGGGATGGATGGAAATGGTCTGAGGTGGAGTCTGGAAATTACCAAACTTCAAGACTTCTTAAGCTCAATTCAGGTCCAGATGCAAGCATTCTAATGGATTATGGGATAAGGATGTTGATGAACAAAGCTGAAGAATTGTATTTGGCTGAACTGAAGGGTGTTCGAGAAGTACTTTATGAATTGAATGATGAAGGGTTTTCACGATTGAAGCATCTTAACATCCTAAACTGTGCTGAAATGGAAAGCATTATTGGCTCTACGGAGTGGGCTTATCATGATCATGCCTTCCCAAACTTGGAATCATTAACCCTACACAATCTGAGTAACATGGAGAGAATATGTAGTGATCCAATTCCAGCACAGGCCTTTACCAAACTACAAGTTATCAAAGTAAAGGGTTGTGACAGGATGGAGTTTCTTTTCTCACATACCATGGTTAAACACCTTTCTGGACTTGTTGAGGTTGAGATTTCTGAATGCAAGTTTATGATGATTATCATAGCCGAGCAACGACAAAAGGATGCTGATGCTGGGCAAACTGACAAGATCAGGCTTACCAACTTGCGTTCCCTTACTCTAGAATGCTTACCTTCCCTTGTTAGTCTCTCTCCTGAGTCAAGTATTGAGGCCACTGATAGCAGTAATATTTGCCCCAGTCAACTTTTTAATGACAAGGTTGAGTTGCCAAACTTGGAGACCTTGAAGCTGTACTCAATCAATATCCAGAAGATATGGAATCATCAACTTTCTTACTTTGAAAATTTGTCCTCTTTGACTGTAGATGGATGTCAACGGTTGACATACCTTTTCTCATACTCTATGGCTAGAAAACTCATCAAGCTTGAACATCTTTTAATTAGTTCATGCAAATCCATGGAGCAGATTCTTGTGTCAGATGAAAATTTGGGTAACCATCACCATCTTCAATTTAGAAAATCCGCTCCAACTGAATTGGTTCCAATTTTCCCCAACTTGGAGACATTTGTGATTTCTCACATGGACAACTTGAAGTCAATATGGCCCAACCAACTCACTGAAAAATCATTTTATAAATTGAAAAGGATGGAAATCACATCTTGTAACAATATCTTGAATGTATTCCCAAGTCATGTGCTAGACAAATTACAAAGCCTGGAATCACTGAATATATGGAACTGTATGGCACTGGAAGCTGTATATGAAATAGATGGTATAATCACTGGGACAGAGCAAGGAGATAGCAATCAAGGAAGGCTGGACATTCCACTGAGAAATTTATCTTTGGGTAATTTGCCAAACCTAAAGCATTTGTGGAATAAGGATCCTCAAGGAAATATCCGACTTCAAAACCTGTTTACAGTAAAAGCTGCTAAATGTCCAAATTTAAAACATGTCTTTCCACTGTCTCTGGCCAAAGACCTTCTCCATCTCCAATTCCTTGAGATAAGTGATTGTGGGGTAGAGGAAATTATTGAAAATGAACAAAGAGGGGTAGAGGCATCTCTTGGGCTGGTTTTCCCAAGATTAGTATCCATAAAATTTCTTAATCTGCCTGAACTTCGATGCTTTTGTAGTGGAAATCACAACTTCAGATTTCCATTGTTAAATAAACTATATGCTGTTGAATGCCCTGTAATGGAGACTTTCTCTCATGGAATCTTAAGGGCATCAATCCTTAGAAAAATATATCTGACTCAGGAAGACGATCAATGCTATTTGGAAGGTGACCTTAATACTACTATAAGAAAGATTTTTGATAGAGATCTCCATGCAAGATTAAGCATTTCATAGAAATTCAGAGGCTGACATAGCAAATTCTTTGCTTCACCTGCACCAGTTTAATGATGTGAGAAGTTGTCTGATTCCACTAAAAATCCTTGATGACTTTCACAAGGATAAATGGTACGGAAGTTAGAAACCTTTGATTTCAATGCTACAGGAACATGCAAAAGTATTAATAATTAATAGATCAGCAGTGAAATGCGATATTCCTGTTCACAACATCTGTATTAATTTTACATCAACAGTATGTATTGGAAGCTACATTATTTGCTTGAGTCTTTCTATTCTATCTTGCCTCAAAAATTGTATGGGACATTTCATTTGTGGATAACAAATTGCACATTCTTGATGATGATGATTCAGGTAAACTCTTTC 4320 0.4042 MDTIASVASKVATPLMKHLTYVLLYSTYVNDLESEIQRLQHEEKEVRHTVEAAKRSGEEIEDTVLDWFGRVRAAVEEGQVFLRGEERERVGCLDVYSRYTKSQRAKNLVDLVREMRRETFVRVSYRRALRCNVSPAAREYVELESRTVMIKGIMQAWEDVKCDIVGLYGMAGVGKTALVKELAWQVEKNGLFDAVVMATVSSTPDVGMIRAEIADGLGLKFDELTELGRASRLRQRIRQEERILVILDDVWGKLELTQIGVPFGEDQRGCKCKLLVTSRDLNVLNTYIGVDKVYRVEVLSEDESWGLFEKRGGDAIKDPSVQPVAEKVAKNCGGLPLLIVTVVEALKNQDLYAWKDALEQVTTYELEGCFYSPVRSAIEKSYEHLENQELKTFFLLLGSMGISCTTRDLLVFGWCLGLHNHVDTLADGRNRLYKLIDNLRVACLLLDEGQRDSLVVLDVVRHVAAYISSRVKPFFTVHRNKELKVWPRMDLLRTCHHIFLDWCYIRELPEVLECPKLKILQLNIQGNSLKVPDDFFVQMKELKVLSLGGLNCNPSLPPSLALLTNLQALYLCKCVLEDISIVGKLTGLEILNLEKSELRELPAVIGGLSNLRLLDLTDCSPLEVIPRNVILSLTSLEELYMGNSNVQEEVKEGKGQSNDSSLSELRNLHQLTTLNVQTEDTSVFPRDFLGFGRLENYKILIGDGWKWSEVESGNYQTSRLLKLNSGPDASILMDYGIRMLMNKAEELYLAELKGVREVLYELNDEGFSRLKHLNILNCAEMESIIGSTEWAYHDHAFPNLESLTLHNLSNMERICSDPIPAQAFTKLQVIKVKGCDRMEFLFSHTMVKHLSGLVEVEISECKFMMIIIAEQRQKDADAGQTDKIRLTNLRSLTLECLPSLVSLSPESSIEATDSSNICPSQLFNDKVELPNLETLKLYSINIQKIWNHQLSYFENLSSLTVDGCQRLTYLFSYSMARKLIKLEHLLISSCKSMEQILVSDENLGNHHHLQFRKSAPTELVPIFPNLETFVISHMDNLKSIWPNQLTEKSFYKLKRMEITSCNNILNVFPSHVLDKLQSLESLNIWNCMALEAVYEIDGIITGTEQGDSNQGRLDIPLRNLSLGNLPNLKHLWNKDPQGNIRLQNLFTVKAAKCPNLKHVFPLSLAKDLLHLQFLEISDCGVEEIIENEQRGVEASLGLVFPRLVSIKFLNLPELRCFCSGNHNFRFPLLNKLYAVECPVMETFSHGILRASILRKIYLTQEDDQCYLEGDLNTTIRKIFDRDLHARLSIS 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03896 1290 Gene3D - 120 294 IPR027417 -
Pste1g03896 1290 PRINTS Disease resistance protein signature 606 622 - -
Pste1g03896 1290 PRINTS Disease resistance protein signature 164 179 - -
Pste1g03896 1290 PRINTS Disease resistance protein signature 237 251 - -
Pste1g03896 1290 PRINTS Disease resistance protein signature 332 346 - -
Pste1g03896 1290 Gene3D - 298 386 IPR042197 -
Pste1g03896 1290 Gene3D Ribonuclease Inhibitor 477 875 IPR032675 -
Pste1g03896 1290 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1117 1248 - -
Pste1g03896 1290 SUPERFAMILY L domain-like 457 864 - -
Pste1g03896 1290 Pfam NB-ARC domain 157 367 IPR002182 GO:0043531
Pste1g03896 1290 Coils Coil 29 56 - -
Pste1g03896 1290 Gene3D Ribonuclease Inhibitor 880 1268 IPR032675 -
Pste1g03896 1290 SUPERFAMILY L domain-like 1021 1244 - -
Pste1g03896 1290 SUPERFAMILY RNI-like 885 1090 - -
Pste1g03896 1290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 396 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03896 Pste-Chr1 19892851 19897563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03896 159 439 WRKY Transcription Factor Family AT5G45050 26.689 2.04e-10 63.5