Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03894 AAGTCATTGCTTTCATACATCACAATGTTATTTATTTGGTTCTTATTATTCTCATACATGACTAGAACTTCCACTTCGGGAGACAGTTTAGCAGGTAGTCAATCTATCCGAGATGGTGAGACTTTGGTTTCAACCAGTGGAATTGTTGAACTGGGTTTCTTCAGTCCCAGAAATTCAACAAGACGATACTTGGGTCTATGGTACAGAAATGTATCCCCTTTCTCAGTGGTGTGGGTGGCTAACCGAAATACACCTCTTGAGAATAACTCAGGAGTTTTCAAACTCAATGAAAAAGGGATTCTTGTGCTTCTCAATGGTACAAACAGCACTATTTGGTCATCCAATGTATCAAATAATACCTCAGTGAATAACCCCATAGCACGGCTCTTGGATTCGGGGAATCTTGTAGTGAAAAGTGGATGGGAAAACAACAAGGAGAACTTTGCATGGCAGAGTTTTGATCATCCCTGTGATACATTTTTGGCAGGAATGAAACTTGGATGGAACTTAGAAACTAGCCTAGAAAGGTTTCTATCATCTTGGGAAAGTGTTGATGATCCTGCTGAGGGAGAATATAGCTTAAGAATCGACCTTAGAGGATATCCTCAAGCAGTAATACTAGAGAGATCTGAGATAAAGACCAGAATAGGGTCATGGAATGGCCAATCTTGGGCTGGATATCCTGGTACAAGTCCTGGAAGTTCACAAATATTTGTGCTCAACGAAAAAGAGGTGTACTATGAGTTCAGGCATGTTGATAGTTCGGTCTACACTGTACTTACAATGACCCCTTCAGGCACTACGCAGAGAATTTTTTGGACACCACAAACAAGAACCCGACAAGTCATCTCATCTGGGGAGGAAGATCAATGTGAGAATTATGCCTTTTGTGGGGCAAATTCTGTATGCAGCTATGATGGTAACCATCCAACCTGTGAATGCATGAAAGGATATATTCCCAAGAATCCTCAATACTGGAATTTATCTGTTTGGTCTAATGGTTGTGTTCCGAGGAATAAATCTAATTGCTCTAACAGTTATTCAGATGGCTTCTTCAAGTACACAGACATGAAATTGCCAGACACATCTTCATCATGGTATAACACAACCATGAACCTGGATGAATGTCAGAAGCGATGTCTGAAAAACTGTTCTTGTGTAGCGTATTCAAATTTAGATGTTCGTGATGGAGGAAGTGGCTGTCTACTTTGGTTCAATAATTTGGTTGACTTGAGGAAATTCTCTCAATGGGGACAAGACCTTTATATCAAAGTCCCTGCTGCAGAGCTAGCTGACCATGGAAACGTCAAGAAAAAAATAGTAGGTATCATTGTTGGTGCAACTATATTTGGATTCATCATCACATGTGTATGCATTTTGATGATTAAAGATCCAGGGGTTGTAAGAAAATTTTACATCAAGCATTACCAAAATACACAAAGAATGGAAGACATGGATTTGCCAACTTTCGATTTCTCAATATCTGGACAAGGGTTGGATGAGTTCAAAAATGAAGTTGCATTGATTGCAAAACTTCAGCACCGTAATCTTGTAAAGTTATTTGGTTGTTGCATCGAAGGAGAAGAGAAAATGTTGATTTATGAATACATGCCCAATCAAAGCTTGGACTATTTCGTTTTTGATAAAACTAAAAGGAAGCTCTTAGATTGGAGTAAGCGTTTCAACATTATTAGTGGTATTGCTCGAGGACTTCTTTATCTTCATCAAGACTCTAGACTGAGGATTATCCACAGAGATCTAAAAACTAGTAATATTTTACTAGATGCAAATTTGGATCCCAAAATATCAGACTTTGGTTTGGCTCGGTCATTTTTAGGAGATCAAGTGGAGGCAAAGACAAATAGGGTGGTCGGAACATATGGTTATATATCTCCTGAATATGCTGTGCGTGGACATTTCTCTGTGAAATCAGATGTCTTTAGTTATGGTGTGATAGTACTAGAGATTATAAGTGGAAAAAAAAACAGAGAATTTTTAGATCCAGAACACTACAATCATCTTCTTGGATATGCATGGAGATTGTGGTCTGAAGAAAGGACTCTAGAATTGTTCGATGAAGTGTTAGAAGAAAGATGTTCACCCACTGAAGTCATACGATGCATACAGGTAGGTTTATTATGTGTACAACAAAGACCAAAAGATAGGCCAGACATGTCATCAGTAGTTTTAATGTTGAATGGTGATAAATTATTGCCAAAGCCAAAGGTTCCTGGCTTTTATACTGAAAAAGATGTTACAGCTGAAGCCAATTCTTCATCACAAAATAAAAAATTATGCTCAAATAATGAATTGTCTATCACTACATTAGATGCAAGATAG 2340 0.3812 KSLLSYITMLFIWFLLFSYMTRTSTSGDSLAGSQSIRDGETLVSTSGIVELGFFSPRNSTRRYLGLWYRNVSPFSVVWVANRNTPLENNSGVFKLNEKGILVLLNGTNSTIWSSNVSNNTSVNNPIARLLDSGNLVVKSGWENNKENFAWQSFDHPCDTFLAGMKLGWNLETSLERFLSSWESVDDPAEGEYSLRIDLRGYPQAVILERSEIKTRIGSWNGQSWAGYPGTSPGSSQIFVLNEKEVYYEFRHVDSSVYTVLTMTPSGTTQRIFWTPQTRTRQVISSGEEDQCENYAFCGANSVCSYDGNHPTCECMKGYIPKNPQYWNLSVWSNGCVPRNKSNCSNSYSDGFFKYTDMKLPDTSSSWYNTTMNLDECQKRCLKNCSCVAYSNLDVRDGGSGCLLWFNNLVDLRKFSQWGQDLYIKVPAAELADHGNVKKKIVGIIVGATIFGFIITCVCILMIKDPGVVRKFYIKHYQNTQRMEDMDLPTFDFSISGQGLDEFKNEVALIAKLQHRNLVKLFGCCIEGEEKMLIYEYMPNQSLDYFVFDKTKRKLLDWSKRFNIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDANLDPKISDFGLARSFLGDQVEAKTNRVVGTYGYISPEYAVRGHFSVKSDVFSYGVIVLEIISGKKNREFLDPEHYNHLLGYAWRLWSEERTLELFDEVLEERCSPTEVIRCIQVGLLCVQQRPKDRPDMSSVVLMLNGDKLLPKPKVPGFYTEKDVTAEANSSSQNKKLCSNNELSITTLDAR 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03894 779 SUPERFAMILY Protein kinase-like (PK-like) 496 743 IPR011009 -
Pste1g03894 779 SMART ntp_6 346 425 IPR003609 -
Pste1g03894 779 ProSiteProfiles Bulb-type lectin domain profile. 27 150 IPR001480 -
Pste1g03894 779 CDD B_lectin 33 156 IPR001480 -
Pste1g03894 779 Gene3D Hepatocyte Growth Factor 342 422 - -
Pste1g03894 779 Pfam S-locus glycoprotein domain 215 322 IPR000858 GO:0048544
Pste1g03894 779 CDD PAN_AP_plant 340 426 - -
Pste1g03894 779 ProSiteProfiles Protein kinase domain profile. 439 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03894 779 FunFam - 537 741 - -
Pste1g03894 779 Pfam D-mannose binding lectin 76 181 IPR001480 -
Pste1g03894 779 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 187 IPR036426 -
Pste1g03894 779 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Pste1g03894 779 Gene3D Transferase(Phosphotransferase) domain 1 537 738 - -
Pste1g03894 779 PIRSF SRK 1 489 IPR024171 GO:0004674
Pste1g03894 779 PIRSF SRK 492 779 IPR024171 GO:0004674
Pste1g03894 779 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 719 - -
Pste1g03894 779 ProSiteProfiles EGF-like domain profile. 287 324 IPR000742 -
Pste1g03894 779 Pfam PAN-like domain 343 411 IPR003609 -
Pste1g03894 779 Gene3D - 21 153 IPR036426 -
Pste1g03894 779 Gene3D Phosphorylase Kinase; domain 1 492 536 - -
Pste1g03894 779 SMART serkin_6 439 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03894 779 SMART blect_4 33 156 IPR001480 -
Pste1g03894 779 ProSiteProfiles PAN/Apple domain profile. 343 426 IPR003609 -
Pste1g03894 779 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 342 425 - -
Pste1g03894 779 Pfam Protein tyrosine and serine/threonine kinase 496 730 IPR001245 GO:0004672|GO:0006468
Pste1g03894 779 Pfam Domain of unknown function (DUF3403) 738 779 IPR021820 GO:0004674
Pste1g03894 779 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03894 Pste-Chr1 19871126 19874670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03894 495 746 Receptor kinase-like Gene Family AT4G23230 58.893 5.10e-104 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03894 PK_Tyr_Ser-Thr 2.2e-39 CL0016