Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03893 AATAATCTTCCTCAACCTTCTACTGCTGGGAAAGGCCGAAAAATTAAGTCAGCATCATGCTGTCCTTCGAAACTTAGAAGTAATTTCTTCCATAGCATCACAATGTTGTTTATTTGGTTCTTCTTGTTATCCTACATGACTAGAATTTCCTCTTCACTAGACCACTTACCTGTGAATCAATCTATCTGGAATGGTGAGACTTTGATTTCTGCAGGTGGAGTTACTGAACTGGGTTTCTTTAACCTAGGAAATTCCACAAGGAGATACCTGTGTATATGGTACAGAAATGTAACCCCTTTAACCGTGGTGTGGGTGGCTAACCGAAATTCACCTCTTGAGAATAACTCCGGAGTTCTCAAACTTAGTGAACAAGGGATTCTTATGCTTCTCAATGGCACAAAAAACACTATTTGGTCATCCAATATATTAAGCAAAGCAGGGAATAGTACAATTGCACAGCTCTTGGATTCAGGAAATTTTGTAGTGAGAAATGAAAAGGAAACTAACAAGGATGAAATGAAAATTGGATGGAACTTGGAGACTGGTCAAGAAAGATATGTATCATCTTGGAAAAGTGACGATGATCCTGCTGTGGGGGAATATGCTATAAAAATCGATCTTAGAGGATATCCTCAATTATTGATGTTCAAGGGACCTAATATAAAATCAAGAGCAGTGTCATGGAATGGCTTATCTCTAGTTGCAAATCCAGCTCCACTTGAATACATGATACCAAAATTTGTGTTCAATGAAAAAGAGGTGTATTATGAGTACAAGCTTCATAAATCGGTTTTCTTTGTGTATACACTGACCCCTTCAGGCACAGGGACCCAGGAAGTGGTCAGAAGTGGGGAAGAAGAACAATGTGAGAATTATGCGTTTTGTGGTGCAAATTCTATATGCATTTATGATGGTAACCATCCAACTTGTGAATGCCTGAGAGGTTATGTTCCCAAGTTTCCTGATCAGTGGAATATATCAGTTTGGGGCAGTGGTTGTGTTCCAAGGAATAAATCTAATTGTGAAAACAGTTACACTGATGGCTTCTCGAACTATACACACATGAAATTGCCAGACACTTCTTCATCGTGGTTTAATAGAACCATGAACCTTGAAGAATGGCAAATCATAAGTGGACGTTTACTTTGGATTAATAATCTGGTTGACATGAGGAGTTTCTCTCAATGGGGACAAGACGTTTATATAAGAGTTCCTGCTTCAGAATTAGACCATGCTGACCAAGGAAACGTCGAGAAAAAGATTATAGGAATCACTTTTGGTGTGATAATCTTCGGATTAATCATCTCATGTGCATGCATATTTTTAATTAAAAATCCAGGGGTTGCAAGAAAAATTTACAACAAGCACTACAAAAATATTGTACTGAGGAAGGAAGACGTTGATTTTCCAACTTTCGATTTGCAAGTCCTAGCTAATGCCACAGAAAATTTTTCAACTAGAAACAAGCTTGGAGAAGGTGGATTTGGCCCAGTATACAAGGGCACATTAATAGATGGGAAAGAATTAGCTGTGAAAAGGCTTTCAAAGAAATCTGAACAAGGATTGAATGAGTTGAAAAATGAAGTAGCATTAATTTCCAAACTTCAGCACTGTAACCTTGTAAAACTTCTTGGTTGCTGCATTGAAGGAGAAGAAAAAATGTTAATTTATGAATACATGCCTAACAAAAGTTTGGACTTCTTTGTTTTTGATGAAACCAAAAGGAAGTTGCTTGATTGGAATACACGTTTCAACATTATTTGTGGCAATGCTCGAGGACTCTTGTATTTTCATCAAGACTCTACATCAAGGATTATTTACAGAGATTTAAAAACTAGTAACATTTTATTGAATCCAAATTTGGATCTCAAAATATTGGATTTTGGATTGGCTAATTACATACCTCCTGAATATGCTGCATGTGGACATTTCTCACTTAAATTAGATGTCTTTAGTTACGGTGTAATAATACCAAAATTTGTAAGTGGAAAGAAAAACACAGAATTTTCAGACCAAGACCACTGTAATAATCTTTTTGGACATGCATGGAGATTATGGAAGAAAGAGAAGGCACTTGAATTATTAGATGAATTCTTAGGTGACCAATGTGAGACCTCTGAAGTCATAGGATGCATACAAGTAGGCCTATTGTGTGTGCAACAAAGGCAGAAGATAGGT 2178 0.3687 NNLPQPSTAGKGRKIKSASCCPSKLRSNFFHSITMLFIWFFLLSYMTRISSSLDHLPVNQSIWNGETLISAGGVTELGFFNLGNSTRRYLCIWYRNVTPLTVVWVANRNSPLENNSGVLKLSEQGILMLLNGTKNTIWSSNILSKAGNSTIAQLLDSGNFVVRNEKETNKDEMKIGWNLETGQERYVSSWKSDDDPAVGEYAIKIDLRGYPQLLMFKGPNIKSRAVSWNGLSLVANPAPLEYMIPKFVFNEKEVYYEYKLHKSVFFVYTLTPSGTGTQEVVRSGEEEQCENYAFCGANSICIYDGNHPTCECLRGYVPKFPDQWNISVWGSGCVPRNKSNCENSYTDGFSNYTHMKLPDTSSSWFNRTMNLEEWQIISGRLLWINNLVDMRSFSQWGQDVYIRVPASELDHADQGNVEKKIIGITFGVIIFGLIISCACIFLIKNPGVARKIYNKHYKNIVLRKEDVDFPTFDLQVLANATENFSTRNKLGEGGFGPVYKGTLIDGKELAVKRLSKKSEQGLNELKNEVALISKLQHCNLVKLLGCCIEGEEKMLIYEYMPNKSLDFFVFDETKRKLLDWNTRFNIICGNARGLLYFHQDSTSRIIYRDLKTSNILLNPNLDLKILDFGLANYIPPEYAACGHFSLKLDVFSYGVIIPKFVSGKKNTEFSDQDHCNNLFGHAWRLWKKEKALELLDEFLGDQCETSEVIGCIQVGLLCVQQRQKIG 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03893 726 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 35 723 - -
Pste1g03893 726 Pfam D-mannose binding lectin 101 191 IPR001480 -
Pste1g03893 726 Gene3D - 47 182 IPR036426 -
Pste1g03893 726 SMART serkin_6 484 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03893 726 FunFam Os07g0541700 protein 560 640 - -
Pste1g03893 726 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 48 178 - -
Pste1g03893 726 ProSiteProfiles EGF-like domain profile. 285 322 IPR000742 -
Pste1g03893 726 SMART blect_4 59 183 IPR001480 -
Pste1g03893 726 Pfam S-locus glycoprotein domain 228 320 IPR000858 GO:0048544
Pste1g03893 726 PIRSF SRK 26 725 IPR024171 GO:0004674
Pste1g03893 726 Pfam Protein kinase domain 485 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03893 726 Gene3D Transferase(Phosphotransferase) domain 1 560 724 - -
Pste1g03893 726 ProSiteProfiles Bulb-type lectin domain profile. 53 175 IPR001480 -
Pste1g03893 726 CDD B_lectin 59 168 IPR001480 -
Pste1g03893 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Pste1g03893 726 SUPERFAMILY alpha-D-mannose-specific plant lectins 102 196 IPR036426 -
Pste1g03893 726 ProSiteProfiles Protein kinase domain profile. 484 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03893 726 Gene3D Phosphorylase Kinase; domain 1 445 559 - -
Pste1g03893 726 SUPERFAMILY Protein kinase-like (PK-like) 468 721 IPR011009 -
Pste1g03893 726 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 449 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03893 Pste-Chr1 19855918 19859079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03893 472 721 Receptor kinase-like Gene Family AT4G23140 50.545 2.32e-89 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03893 Pkinase 1e-30 CL0016