Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03892 TTATTTCGTTTCCTCCTTTTACTCTCTTATTTCAAAACATGCACTTCACTAGACAGTTTAACTGCAAACGAATCCATTCGAGATGGTGAGAGTTTAGTTTCAGCAGATGGAACATTTGAACTGGGTTTCTTCAGCCCAGGAAATTCAAAAGGGCGTTATGTGGGTGTGTGGTACAAGAATCTATCTCCTTTAACTGTGGTGTGGGTGGCCAACAGAGGAACACCTATCAAGAATAAATTAGGAGTCTTGAAACTAAATGAAGAGGGGCTTCTTGTGATTCTCAGTGGCACCAACAGCACTGTGTGGTGGTCCAAGATATCAAACAAAACAGTGAATAATCCGATAGCGCAGATCTTGGACTCGGGAAATCTTGTTATGAAAAATGGAGAAGATAATAAAGAGGAAGAATTTATGTGGCAGAGTTTTGATTATCCATGTGATACAATGCTGCCAGGAATGAAGCTTGGATGGAACTTGGTCAGTGGTATAGATAGATATTTTTCATCTTGGAAAAGGGAAGATGATCCAGCTATGGGAGAGTATTCTTTAAAGGTTGACATAAGGGGATATCCACAACTAATTTTGATGAAAAGATCTATTTTGAAGGTTAGAGCTGGTTCATGGAATGGCCTTGCTTTAACTGGTTATCCGACTCAACAGTTGAAGGGAAAACAAACATACAAATTTGTCATGAATGCAAAAGAAGTATATCATCTGTATGAAAACCCTCATAGCTTGATTGTCGTATATAGATTGACACCTTCAGGCATGTTGCAGGGTTTAGCTTGGACAAGCCAAACAAGTGGTCAGAAAGTTATTGCATCTTGGGCAGAAGACCGCTGTGATAATTATGCTTTTTGTGGTTCAAATTCTATGTGCAATATGTATGGTAATGTTCCAAGATGTGAATGCCTGAAAGGATATGTTCCCAACTTCCCTGATCAATGGAATATATCATATTGGTCTGGTGGTTGTGTTCCAATGAATAAAGAAATTTGTAAAAGCAATACTGGTCACTTCCTGAGGCATACAAATATGAAGTTGCCAGATACTTCCTTTTCTTGGTTTAGTACAACCATAAACCTTGATGAATGTCGGAAGTTGTGCTTGAAAAACTGTTCATGTTCAGCATATGCAAATCTAGATATTCGTGATGGAGGAAGTGGCTGTCTACTTTGGTTTGATGATCTGATTGACATGAGGAGATTCACTCAATGGGGCCAAGACCTTTACATAAGAGTTTCTGCCTCAGAACTAGATAATAGCCTTGGAAACAATAACCAAACTATCGTAGGAATCTCTATTGGTGTGGCCATTTTTGGACTTGTTATGTGTGTCATACGCAGAAAAAAAGTTTTGCATATTTTATATGCAGCAGCAGTTAATTATCATCTCCCCCTGTTTCAATGGCGGCAAGAATATTTTAGAATGAGGACGGAAGACATGAATTTGTCAACATTTGATTTGCCAACCATTGTTAAAGCTACCAATAATTTTTCTAGCAGAAATAAACTTGGGGAAGGAGGATTTGGACCAGTGTATAAGGGTACACTGATGGATGGGCTGGAGGTGGCTATAAAACGACGCTCAAAGATGTCTGATCAAGGATCAGAGGAATTTAAAAATGAAGTTATGTTAATTGCAAAGCTTCAGCACCGAAATCTTGTTAAGCTGCTTGGTTGCTGCATTCATGGAGAGGAAAAAATGTTGATCTATGAATACATGCCCAACAAGAGCTTGGATCACTTCATCTTCGATGAAACTAGAAGCAAGCTCTTGACCTGGCCTCAGCGTTTCCATATCATTGATGGCATTGCTCGAGGACTTCTCTATCTTCACCAAGATTCTAGACTGAGAATTGTCCATAGAGATTTGAAAACTAGCAATATCCTACTTGATGCTTATATGAATCCAAAAATCTCAGACTTTGGCCTGGCTCGGACTTTTGGAGTTGATGATCAGATTGAAGATAAAACAAAAAAAGTGGTTGGAACATATGGTTACATGCCTCCAGAGTATGCTGTACACGGTCACTACTCTCTTAAATCAGATGTCTTCAGTTTTGGTGTAATTGTACTTGAGATAGTCAGTGGAAAGAAAAATAGGAAGTTTTTAGATCCAGAACAGTCTCTCAATCTTCTAGGACATGCATGGAGACTATGTACTGAGAACAGGCCATTGGAACTGATAGATGAACACCTGCAGGAAAGATGCAACTTGTTTGAAGTCTTACGATGCATACATGTGGGTTTGTTATGTGTACAACAAAATCACGGAGACAGACCAGACATGGCCTCAGTTATTCTTATGCTGAATGGTGACAAATTATTGCCTCAGCCAAAGACTCCTGGATTTTACACTGGAAGGGGTTTAACTGAATCAGTATCATCACCAAATGAGATGCCCATCGATCGTTACAGGATGACAATGGGTCGAGAGACACTACTTGATTGCAAATATAATCTCGCAAAACTGCAAGAGGACCATGATATCGTTGAGAACGATGCAAGAGAGCCATGGGTGGGGAAAGAGAGGCCGGAATTACTGGATAAAGTATTGGGAGAACAATGTTCACCCGTTGAAGTCATACGATGCATTCGGATAGACCTGTTCTGTGTGCAACAAAGACCAGAAGATAGATCAGACATGTCA 2652 0.3967 LFRFLLLLSYFKTCTSLDSLTANESIRDGESLVSADGTFELGFFSPGNSKGRYVGVWYKNLSPLTVVWVANRGTPIKNKLGVLKLNEEGLLVILSGTNSTVWWSKISNKTVNNPIAQILDSGNLVMKNGEDNKEEEFMWQSFDYPCDTMLPGMKLGWNLVSGIDRYFSSWKREDDPAMGEYSLKVDIRGYPQLILMKRSILKVRAGSWNGLALTGYPTQQLKGKQTYKFVMNAKEVYHLYENPHSLIVVYRLTPSGMLQGLAWTSQTSGQKVIASWAEDRCDNYAFCGSNSMCNMYGNVPRCECLKGYVPNFPDQWNISYWSGGCVPMNKEICKSNTGHFLRHTNMKLPDTSFSWFSTTINLDECRKLCLKNCSCSAYANLDIRDGGSGCLLWFDDLIDMRRFTQWGQDLYIRVSASELDNSLGNNNQTIVGISIGVAIFGLVMCVIRRKKVLHILYAAAVNYHLPLFQWRQEYFRMRTEDMNLSTFDLPTIVKATNNFSSRNKLGEGGFGPVYKGTLMDGLEVAIKRRSKMSDQGSEEFKNEVMLIAKLQHRNLVKLLGCCIHGEEKMLIYEYMPNKSLDHFIFDETRSKLLTWPQRFHIIDGIARGLLYLHQDSRLRIVHRDLKTSNILLDAYMNPKISDFGLARTFGVDDQIEDKTKKVVGTYGYMPPEYAVHGHYSLKSDVFSFGVIVLEIVSGKKNRKFLDPEQSLNLLGHAWRLCTENRPLELIDEHLQERCNLFEVLRCIHVGLLCVQQNHGDRPDMASVILMLNGDKLLPQPKTPGFYTGRGLTESVSSPNEMPIDRYRMTMGRETLLDCKYNLAKLQEDHDIVENDAREPWVGKERPELLDKVLGEQCSPVEVIRCIRIDLFCVQQRPEDRSDMS 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03892 884 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 332 414 - -
Pste1g03892 884 Pfam PAN-like domain 333 400 IPR003609 -
Pste1g03892 884 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 176 IPR036426 -
Pste1g03892 884 CDD STKc_IRAK 505 773 - -
Pste1g03892 884 Pfam Protein tyrosine and serine/threonine kinase 502 722 IPR001245 GO:0004672|GO:0006468
Pste1g03892 884 SMART ntp_6 335 414 IPR003609 -
Pste1g03892 884 ProSiteProfiles PAN/Apple domain profile. 333 415 IPR003609 -
Pste1g03892 884 Pfam S-locus glycoprotein domain 204 311 IPR000858 GO:0048544
Pste1g03892 884 SMART blect_4 23 145 IPR001480 -
Pste1g03892 884 CDD PAN_AP_plant 333 415 - -
Pste1g03892 884 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 779 - -
Pste1g03892 884 CDD B_lectin 23 145 IPR001480 -
Pste1g03892 884 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Pste1g03892 884 Pfam D-mannose binding lectin 65 171 IPR001480 -
Pste1g03892 884 PIRSF SRK 815 884 IPR024171 GO:0004674
Pste1g03892 884 PIRSF SRK 1 814 IPR024171 GO:0004674
Pste1g03892 884 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 574 - -
Pste1g03892 884 ProSiteProfiles Bulb-type lectin domain profile. 17 139 IPR001480 -
Pste1g03892 884 Gene3D Transferase(Phosphotransferase) domain 1 575 777 - -
Pste1g03892 884 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 12 142 - -
Pste1g03892 884 Gene3D Hepatocyte Growth Factor 330 411 - -
Pste1g03892 884 Gene3D Phosphorylase Kinase; domain 1 467 574 - -
Pste1g03892 884 SMART serkin_6 499 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03892 884 SUPERFAMILY Protein kinase-like (PK-like) 483 783 IPR011009 -
Pste1g03892 884 Gene3D - 12 142 IPR036426 -
Pste1g03892 884 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 4 762 - -
Pste1g03892 884 ProSiteProfiles Protein kinase domain profile. 499 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03892 Pste-Chr1 19816080 19828866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03892 487 817 Receptor kinase-like Gene Family AT4G23140 53.982 3.50e-121 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03892 PK_Tyr_Ser-Thr 1.7e-47 CL0016