Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste1g03889 | ATGAAGATTCCAGATACATCTTCATCACGGTTCAATAAGACCATAAACCTTGAGGAATGTCGGAAGTCTTGTCTGAAAAACTGTTCTTGTAAAGCATATGCGAATTTGGATATTCGTAACGGAGGAAGTGGCTGTTTACTTTGGTTCGATAATCTTACTGATATAAGACAATTCTCTAAAGGGGGACAAGATCTTTATTTCAGAGTCCCAGCATCAGAGCTAGTTAATGGGCATGAGAAAAACATGAAAAGGCTGCTAGGAATCACAATTGGTGCGGTTATTCTTGGATTAACTCTGTTTGTTTGCATAATAACAGTAATCAAAAAGCAAGGGCTAGCAAGAATAATTGATAGGAAGCATTTCAAACATAAACTGAGAAAGGAATACATTGATTTATCAACATTTGATTTCCCAATCATAGCAAGAGCCACAGAAAACTTTGCAAAGAGTAACAAACTGGGAGAAGGTGGCTTTGGCCCTGTGTACAGGGGTAGACTGAAGGGTGGCCAAGAGTTTGCTGTGAAAAGGCTTTCAAAGAATTCAGGACAAGGGTTGGAGGAATTCAAAAATGAAGTTGTATTGATTGCCAAACTTCAGCATCGTAATCTTGTCAGACTTATAGATGAAACTAGAAGGACATTAATAGATTGGCCAAAGCGTTTCAACATTATCTGCGCTATTGCACGAGGACTTCTCTATCTGCATCAAGACTCTAGATTGAGGATTATTCACAGAGATCTGAAAACCAGCAACATTTTACTCGATTCAAATTTGGATCCAAAAATATCAGACTTTGACTTAGCTAGAATATTTTGGGGAGATCAAGTTGAGGAAAACACAAACAAGGTGGCTGGAACATATGGTTACATGCCTCCTGAGTATGCTATTCGTGGGCATTTTTCAATGAAATCAGATGTTTTTAGTTTTGGTGTGATAGTGTTAGAGGTTCTATGTGGCAAGAGGAACAGGGAGTTTTCAGACTCAAACCACTACCTTAATCTTCTTGGACATGCATGGATAATGTGGACTAAAGATAGGGGCTTCGAACTGCTGGATGAAGTTTTAAGAGAAAGATTTACATCTTCTGAAGTCATCAGATGCATACAAGTGGGTCTGTTATGCGTGCAACAAAGACCAGAAGATAGACCAGATATGTCATCAGTTGTTCTGATGCTGAATGGTGAGAAATTATTGCCCAACCCAAAGGTACCAGGGTTTTACACAGAAGGAGATGATACACCTGAATCAGCTGTAAAACATTTTTCTTCTAATCACATTTCTATCACAACGTTAGAAGCAAGGTAG | 1305 | 0.387 | MKIPDTSSSRFNKTINLEECRKSCLKNCSCKAYANLDIRNGGSGCLLWFDNLTDIRQFSKGGQDLYFRVPASELVNGHEKNMKRLLGITIGAVILGLTLFVCIITVIKKQGLARIIDRKHFKHKLRKEYIDLSTFDFPIIARATENFAKSNKLGEGGFGPVYRGRLKGGQEFAVKRLSKNSGQGLEEFKNEVVLIAKLQHRNLVRLIDETRRTLIDWPKRFNIICAIARGLLYLHQDSRLRIIHRDLKTSNILLDSNLDPKISDFDLARIFWGDQVEENTNKVAGTYGYMPPEYAIRGHFSMKSDVFSFGVIVLEVLCGKRNREFSDSNHYLNLLGHAWIMWTKDRGFELLDEVLRERFTSSEVIRCIQVGLLCVQQRPEDRPDMSSVVLMLNGEKLLPNPKVPGFYTEGDDTPESAVKHFSSNHISITTLEAR | 434 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste1g03889 | 434 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 198 | 400 | - | - | |
| Pste1g03889 | 434 | Gene3D | Phosphorylase Kinase; domain 1 | 109 | 205 | - | - | |
| Pste1g03889 | 434 | Pfam | Protein kinase domain | 222 | 388 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pste1g03889 | 434 | Pfam | Protein kinase domain | 148 | 208 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pste1g03889 | 434 | Pfam | PAN-like domain | 1 | 55 | IPR003609 | - | |
| Pste1g03889 | 434 | CDD | PAN_AP_plant | 1 | 70 | - | - | |
| Pste1g03889 | 434 | SMART | serkin_6 | 147 | 368 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pste1g03889 | 434 | Gene3D | Hepatocyte Growth Factor | 1 | 68 | - | - | |
| Pste1g03889 | 434 | ProSiteProfiles | PAN/Apple domain profile. | 1 | 71 | IPR003609 | - | |
| Pste1g03889 | 434 | SUPERFAMILY | Protein kinase-like (PK-like) | 131 | 392 | IPR011009 | - | |
| Pste1g03889 | 434 | SMART | ntp_6 | 1 | 69 | IPR003609 | - | |
| Pste1g03889 | 434 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 242 | 254 | IPR008271 | GO:0004672|GO:0006468 | |
| Pste1g03889 | 434 | Gene3D | Transferase(Phosphotransferase) domain 1 | 206 | 395 | - | - | |
| Pste1g03889 | 434 | ProSiteProfiles | Protein kinase domain profile. | 147 | 398 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pste1g03889 | 434 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 15 | 413 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste1g03889 | Pste-Chr1 | 19802129 | 19805135 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste1g03889 | 135 | 428 | Receptor kinase-like Gene Family | AT4G11530 | 50.621 | 9.25e-107 | 328 |
Transcription factors information