Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03885 ATGAAGCTCTCCTTCTCCGTGCACTCTGCGAAACCCCAATCGAAGCCGAAACAGGTGAAGAGGTTGGACGACCCTTGGGCTGCCGAAGACGAGACCGCCAAAGGAAAACTCCTCATCACCGAATTCGACCCTTCTAAACCGGCCCCGCCTCCACCCTGTTATCCCCCTATTCAAAACGAATGGAAACCCATCAAGAAGATGAAGAATCTCCACCTCCCCACCGCCGCCGACACCCAATCCCTCGCGTTCGAACTCGCCGCCGACCCCCACGCCCACGCCCACGCCCTCGAGTCCGACATGTCCTACGGCCTCAACCTCCGCAACAACAAGCAGGACGGCGGTCACGATGGTTTGCGTTTGCTCCGGCGGCCCGTTCCGGTGGAGGCCACGATGCTGCATAAACTGAAGGACGATCTGGAGAGACTGCCTGAGGACCAGGGTTTCGAGGAGTTTAAGGATGTCCCCGTGGAGGGGTTCGGCGCGGCTCTTCTGGCTGGTTATGGTTGGAAGGAAGGGATGGGGATTGGGAAGAACGCTAAGGAGGATGTTAAGGTGGTCCAGATCAAGCGCAGGACTGACAAGGAAGGTTTAGGATTTGTTGGTGATGCTCCTGCCCCTCTTGTTCGCCCCAATTATGATAGGGACAACAATAATATCAAAGATAAGGATAAGGAGAAGGTTGTTAGGATTGTTGGGGGAAGAGATGTTGGGTTGAAGGGTAGTGTTGTGTCTAGGATTGGCCTTGATTATCTTGTTTTGGAGCTTTCAAGGAGTGAGGAGAAGGTGAAAGTGAAGGTCAAGGTGGAGGATGTTGCTGAATTGGGTTCTAAGGAGGAAGAGAGGTGTTTGAGGAGATTGAAGGCTAAGCGGGGAAGGGATGAGGTGGAGGAGAAGAGAGGGGATGGTAGTAGAAGAGAGGAGAGGACACCCAGGGATGAGAGGAGACTGGTGGACCATCGGAAGCTTTCTTGGCTTACAAGTCACATTAGGGTTAGGGTGATTAGCCGGGATTTTAAAGGGGGGCGCTTCTATTTGAAGAAAGGGCAGATTCTGGATGTCGTCGGCCCTACTACTTGTGATATATCTATGGATGAGAGCAGGGAGATTGTTCAAGGAGTGTCTCAAGATGTTCTTGAGACTGCAATTCCTAAACGTGGTGGACCTGTGCTTGTATTGGCTGGTAAATACAAGGGTGTGTTTGGTAGTCTGATGGAGAGGGATTTTGATCGAGAAACTGCCATTGTTAGGGATGCTGATACCCACAACCTCCTCAATGTGAAACTTGAACAGATTGCGGAGTATTTAGGGGATCCAAGCTTATTGGGGCATTGA 1332 0.518 MKLSFSVHSAKPQSKPKQVKRLDDPWAAEDETAKGKLLITEFDPSKPAPPPPCYPPIQNEWKPIKKMKNLHLPTAADTQSLAFELAADPHAHAHALESDMSYGLNLRNNKQDGGHDGLRLLRRPVPVEATMLHKLKDDLERLPEDQGFEEFKDVPVEGFGAALLAGYGWKEGMGIGKNAKEDVKVVQIKRRTDKEGLGFVGDAPAPLVRPNYDRDNNNIKDKDKEKVVRIVGGRDVGLKGSVVSRIGLDYLVLELSRSEEKVKVKVKVEDVAELGSKEEERCLRRLKAKRGRDEVEEKRGDGSRREERTPRDERRLVDHRKLSWLTSHIRVRVISRDFKGGRFYLKKGQILDVVGPTTCDISMDESREIVQGVSQDVLETAIPKRGGPVLVLAGKYKGVFGSLMERDFDRETAIVRDADTHNLLNVKLEQIAEYLGDPSLLGH 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03885 443 SMART G-patch_5 154 200 IPR000467 GO:0003676
Pste1g03885 443 Gene3D - 328 382 - -
Pste1g03885 443 Pfam G-patch domain 143 199 IPR026822 -
Pste1g03885 443 MobiDBLite consensus disorder prediction 1 27 - -
Pste1g03885 443 ProSiteProfiles G-patch domain profile. 156 202 IPR000467 GO:0003676
Pste1g03885 443 PANTHER G PATCH AND KOW-CONTAINING 1 439 IPR045166 GO:0000398
Pste1g03885 443 MobiDBLite consensus disorder prediction 293 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03885 Pste-Chr1 19787258 19788589 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03885 292 416 C2H2 Transcription Factor Family AT1G55460 29.851 8.30e-07 49.3