Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03883 ATGGAGGAGGGAAGTTCCGATTACAATTGCGATTGCGAGAGGGAGCGAATCCGCAACATCTGCATCTTGGCGCACGTGGACCACGGCAAGACCACCCTGGCGGACCACCTGATCGCGGCGGCGGGAGGCGGCGTGGTCCATCCGAAGCTGGCGGGGCGCGTCAGGTTCATGGACTACCTGGACGAGGAGCAGCGGCGCGCCATAACCATGAAGAGCTCGTCGATCCGGCTCCAGCACGCCGGGCACGCCGTGAACCTGATCGACTCCCCCGGGCACATCGACTTCTGCAGCGAGGTGTCGACGGCGGCGCGGCTGAGCGACGGCGCGCTCCTCCTGGTGGACGCGGTGGAGGGAGTCCACATCCAGACCCACGCCGTGCTCCGGCAGTGCTGGATCGAGCGGCTTACCCCCTGCCTCGTCCTCAACAAACTCGACCGCTTAATCACCGAACTCAAACTCTCTCCCTCCGAAGCCTACTCCCGCCTCTTGCGCATCGTCCACGACGTCAACGGTATCGTCAGCGCTTACAAGTCCGAGAAGTATCTCTCCGACGTCGACTCTCTCCTCGCCGGCACAGACTCCGACTCCGCTAGCTCCACCGGCGAGACTCTGGAGGATTACGACGCCAATGAGGACGTTTTTCAGCCCCAGAAGGGTAATGTTATATTCGCTTGTGCCCTCGACGGATGGGGGTTTGGCATTCCTGAGTTTGCCGAGATTTATGCTTCTAAGCTTGGGGCTAGTGTTAGTGCCTTGTCGAGAGCCTTGTGGGGACCTAGATATTTTAACCCTAAGACCAAGATGATTGTTGGGAAGAAAGGGGCTGGTGCTAATAAGAAACCTATGTTTGTTCAGTTTGTGTTGGAGCCCTTGTGGCAGGTGTATCAGGGCGCCTTGGATGGGGACAGGGGTTTGGTTGATAGGGTTATCAAGTCTTTTTCTTTGAATGTGCCCCCTCGTGAGCTGCAGAATAAGGATTTCAAGGTTCTGCTTCAGGCTGTTTTTAGCCGCTGGCTTCCTCTTTCCGAGGCTGTTTTGTCCATGGTCGTTAGGTCTTTGCCGGACCCTGTCACCGCCCAGGCGTTTCGGATTTCCCGGTTGATTCCCAAGCGTCACCTTGTTGAGGAGCCGGTGGCTGCAGAGGCTGAGTTGGTCAGGAAGGCCGTGGAGGAGTGTGATTTTAGAGATGAGACTCCTTGTGTTGCTTTCGTGTCTAAGATGTTTGCTGTGCCGCTTAAGATGGTTCCTGGACAAATGAATGGTTTTGGTGATGAAAGAGAGGGAGATTCAGATGAGTGTTTTCTTGCATTTGCCAGGATTTTTAGTGGGGTTTTGTATGCGGGGCAGAGAGTTTTTGTTCTTTCTGCGATGTATGATCCGCTGAAAGAGGAATCCATGCAGAAGCATATACAGGAGGTTGAGTTGAAATCACTGTATTTGATGATGGGGCAAGGGTTGAAAGTGGTGAAGTCTGCTAAGGCAGGGAATATTGTTGCTATTGCAGGTCTTGGGCAGCATATATTGAAGAGTGCTACTCTTTCTTCTACTAGGAACTGTTGGCCTTTTTCTAGTATGGCGTTCCAAGTTGCGCCCACTTTGAGAGTTGCGATTGAGCCGTCTGACCCTGCAGATGTTGGTGCACTGCTCAAAGGCTTGAGGCTTCTGAATCGAGCAGATCCGTTTGTTGAGGTCACAGTGTCTGCAAGGGGAGAGCATGTGCTGGCCGCTGCAGGGGAAGTTCATCTGGAGAGATGCATAAAGGATTTAAAGGATAGGTTTGCAAAGGTAAGCTTGGAGGTCTCTCCGCCTCTCGTGTCCTACAAAGAAACCATTGAGGGAGATGTATTGAACGTAATGGAAAATTTGAAAGTTCTTAGCAGGAGATCAGCTTATGTTGAAAAAATTACACCCAATGGAAGATGTATTGTGCGGGTGCAGGTGATGAAACTTCTACCTTCTCTGACAAAGGTGCTCGATGAAAGCTCTCATTTACTTGAAGATATCATTGGAGTAAAGTCAGGGCAGACAATAAAAAGTTTGGAAACCCAGAGACAGGGTACTCATGAGAATGATAACCCAGTTGAAGTGCTAAGAAAACGCATATTGGATGCTGTGGAGGGTGATATTTTGAGCAGGAATGAGAATGACAAGGACCATGCTGAGAAATGTAAACTGAAGTGGCTAAAGATTTTGAGGCGAATATGGGCACTTGGGCCTAGACAGATTGGTCCTAACCTTCTCTTTACTCCCGATACTAAAGCAGAAACTACTGATAGCTCTGTCTTAATACGTGGTAGTCCTGTTGTATCAGAAATGTTGGGCTTTGTGGCCGATTCTACTACCACTGACTCGGTTCCTGAGTCGTCTCAAAATGCAAACCAAGCTTTGTACATGGATGCTGAGCACCTTGAGAGTAGTGTAATATCTGGGTTCCAATTGGCGACTTCATCTGGACCTTTGTGTGATGAACCTATGTGGGGTTTGGCATTTGTCATTGAAGCACGCATATCTCCATTTTCGGGGCAGCATGATGTATCTGAAACACAACAGCAATCTGAGCAGTATGGAATCATTGCAGGGCAGGTAATTGCTACTGTCAAAGATGCTTGTAGAGCAGCTGTGCTTCAGAATAAGCCACGGCTTGTGGAAGCAATGTACTTTTGTGAATTGAATACACCTACTGAGTATTTGGGTCCCATGTATGCTGTACTTTCCCGAAGACGGGCCCGAGTTTTGAAGGAAGAGATGCAAGAAGGTTCCCCTTTCTTCACTGTGCATGCATATGTCCCTGTTTCTGAGAGCTTTGGTTTTGCGGATGAACTAAGAAGGTGGACTTCTGGCGCTGCCAGTGCACTTCTTGTCCTTAGCCACTGGGAAGCACTTCCTGAGGACCCTTTCTTTGTACCTAAAACAGATGAGGAACTTGAAGAGTTTGGAGATGGATCTAGTGTTCTTCCAAACACTGCAAGAAAGTTAATTGATGCAGTCAGAAGACGTAAGGGCCTTCCCGTGGAGGAAAAGGTGGTGCAGCATGGAACCAAGCAGAGGACACTCGCTCTTGAAATTTTGTCTTCAGAACTGTTGCTGACCCATTGCATTGGTGGTGTTGCAACTCTGAGTGGTGGTGATAAGACTGCCTTGGCACTTGGCAGTGGTCAAAATCTTGAGTGGACCTCAAAGGATGTGGATGATTCATATATTGGTTCAGGAACTCCTTTATTTGACGGGGTGGTGCCTTGTAGGATCACCAAGGAATATCCAATGTGGCGCCAGCTGACACACCATTGCAGGCTTCCCATTCCTAAAGTAGTTAGTGATATTGAGATGTGTGAGAATAATAATGCCATGGACAAAATGTTAATGTGGTGCAGCAGCAAGCAAAGAGGTCAGAATTCAAGGGCTTCACTGGCAGACCCATATACTCAGTTTGGTCATTGGTGTGGTTCAGAAAGTGAGCAGCGGGCAATATTTGTTGATGAGATCAAATGTGTTGGTTGCCTGAAATGTGCATTGTTAGCTGAGAAGACTTTTGCTATTGAATCAGTTTATGGAAGAGCAAGGGTTGTTGCTCAATGGGCAGATTCCCCGCACAAAATTGATGAGACAATACTAATAGAATCTTGTCCGCAGACGGTGGTGCTTACTGCTTCTAGTACTGGACCCCTTGATCTAGTTAACTGCTTGCCCATCATATCTGGTTGGCTAAGATTCACGGTTCTCCTTGTCAATGACCATTCCTCTGCTTTTGAATACACTCTGGTTGTTGAAAGGTCCAACCTTGCAGCTTTGGGGTTCTTGATGTCCAAGCAGTCACATGGCAACGTTAAGAGTAGGTGCAGGTCGTACGACTGGTGCTCGTTTGAGTCAACACCTGAGTTGCAGCAGCATGTGGGTGGTTCTCTAGCTCTGCAGATTGTTAACAGCTCTTGGTTGCAGTGCATGTTGGCAGCAGCTAGATTGTATATGATTGGAATGGCAATTACAGAATTATTGGCCATAGTTGGAAATAAAAATAGGTAG 4020 0.4876 MEEGSSDYNCDCERERIRNICILAHVDHGKTTLADHLIAAAGGGVVHPKLAGRVRFMDYLDEEQRRAITMKSSSIRLQHAGHAVNLIDSPGHIDFCSEVSTAARLSDGALLLVDAVEGVHIQTHAVLRQCWIERLTPCLVLNKLDRLITELKLSPSEAYSRLLRIVHDVNGIVSAYKSEKYLSDVDSLLAGTDSDSASSTGETLEDYDANEDVFQPQKGNVIFACALDGWGFGIPEFAEIYASKLGASVSALSRALWGPRYFNPKTKMIVGKKGAGANKKPMFVQFVLEPLWQVYQGALDGDRGLVDRVIKSFSLNVPPRELQNKDFKVLLQAVFSRWLPLSEAVLSMVVRSLPDPVTAQAFRISRLIPKRHLVEEPVAAEAELVRKAVEECDFRDETPCVAFVSKMFAVPLKMVPGQMNGFGDEREGDSDECFLAFARIFSGVLYAGQRVFVLSAMYDPLKEESMQKHIQEVELKSLYLMMGQGLKVVKSAKAGNIVAIAGLGQHILKSATLSSTRNCWPFSSMAFQVAPTLRVAIEPSDPADVGALLKGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCIKDLKDRFAKVSLEVSPPLVSYKETIEGDVLNVMENLKVLSRRSAYVEKITPNGRCIVRVQVMKLLPSLTKVLDESSHLLEDIIGVKSGQTIKSLETQRQGTHENDNPVEVLRKRILDAVEGDILSRNENDKDHAEKCKLKWLKILRRIWALGPRQIGPNLLFTPDTKAETTDSSVLIRGSPVVSEMLGFVADSTTTDSVPESSQNANQALYMDAEHLESSVISGFQLATSSGPLCDEPMWGLAFVIEARISPFSGQHDVSETQQQSEQYGIIAGQVIATVKDACRAAVLQNKPRLVEAMYFCELNTPTEYLGPMYAVLSRRRARVLKEEMQEGSPFFTVHAYVPVSESFGFADELRRWTSGAASALLVLSHWEALPEDPFFVPKTDEELEEFGDGSSVLPNTARKLIDAVRRRKGLPVEEKVVQHGTKQRTLALEILSSELLLTHCIGGVATLSGGDKTALALGSGQNLEWTSKDVDDSYIGSGTPLFDGVVPCRITKEYPMWRQLTHHCRLPIPKVVSDIEMCENNNAMDKMLMWCSSKQRGQNSRASLADPYTQFGHWCGSESEQRAIFVDEIKCVGCLKCALLAEKTFAIESVYGRARVVAQWADSPHKIDETILIESCPQTVVLTASSTGPLDLVNCLPIISGWLRFTVLLVNDHSSAFEYTLVVERSNLAALGFLMSKQSHGNVKSRCRSYDWCSFESTPELQQHVGGSLALQIVNSSWLQCMLAAARLYMIGMAITELLAIVGNKNR 1339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03883 1339 SMART EFG_C_a 880 969 IPR000640 -
Pste1g03883 1339 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 15 249 IPR000795 GO:0003924|GO:0005525
Pste1g03883 1339 Gene3D - 8 220 IPR027417 -
Pste1g03883 1339 CDD EF2_snRNP_III 531 602 - -
Pste1g03883 1339 PRINTS GTP-binding elongation factor signature 137 146 IPR000795 GO:0003924|GO:0005525
Pste1g03883 1339 PRINTS GTP-binding elongation factor signature 19 32 IPR000795 GO:0003924|GO:0005525
Pste1g03883 1339 PRINTS GTP-binding elongation factor signature 65 73 IPR000795 GO:0003924|GO:0005525
Pste1g03883 1339 PRINTS GTP-binding elongation factor signature 101 112 IPR000795 GO:0003924|GO:0005525
Pste1g03883 1339 PRINTS GTP-binding elongation factor signature 85 95 IPR000795 GO:0003924|GO:0005525
Pste1g03883 1339 FunFam Elongation factor like GTPase 1 879 1014 - -
Pste1g03883 1339 Gene3D Elongation Factor G (Translational Gtpase), domain 3 531 606 - -
Pste1g03883 1339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 354 IPR027417 -
Pste1g03883 1339 SUPERFAMILY Ribosomal protein S5 domain 2-like 605 882 IPR020568 -
Pste1g03883 1339 Pfam Elongation factor Tu domain 2 435 513 IPR004161 GO:0005525
Pste1g03883 1339 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 13 1020 - -
Pste1g03883 1339 Gene3D Translation factors 356 528 - -
Pste1g03883 1339 Gene3D - 626 877 IPR014721 -
Pste1g03883 1339 CDD eEF2_snRNP_like_C 883 962 - -
Pste1g03883 1339 FunFam Translation elongation factor 2 530 606 - -
Pste1g03883 1339 SUPERFAMILY Translation proteins 390 525 IPR009000 -
Pste1g03883 1339 CDD EF2_II 399 516 - -
Pste1g03883 1339 FunFam Elongation factor 2-like protein 8 222 - -
Pste1g03883 1339 FunFam Elongation factor like GTPase 1 234 339 - -
Pste1g03883 1339 Pfam Elongation factor G C-terminus 881 965 IPR000640 -
Pste1g03883 1339 Pfam Elongation factor Tu GTP binding domain 16 278 IPR000795 GO:0003924|GO:0005525
Pste1g03883 1339 SUPERFAMILY EF-G C-terminal domain-like 883 981 IPR035647 -
Pste1g03883 1339 SUPERFAMILY EF-G C-terminal domain-like 529 603 IPR035647 -
Pste1g03883 1339 CDD aeEF2_snRNP_like_IV 602 887 - -
Pste1g03883 1339 CDD EF2 18 242 - -
Pste1g03883 1339 Gene3D Yeast translation eEF2 (G' domain) 234 339 - -
Pste1g03883 1339 Gene3D - 879 1013 - -
Pste1g03883 1339 Gene3D - 1153 1215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03883 Pste-Chr1 19778194 19786507 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03883 11 1022 Eukaryotic Initiation Factors Gene Family AT3G22980 69.096 0.0 1437