Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03879 ATGGCACCAATGGGATCTTTTCAGATTGGTCATTCCGGAAAGGATAACAATTCTCCTGAATTAAGAAGTCCTTGGTTCCATAACATCACAATGTTATTTATTTGGCTCTTTTTAGTCTCCTACTTGTTTAGAACTGCCACTGCACTAGATAGTTTAGCAGTCAGTCAATCCATCCAAGATGGTGAGACTTTGGTTTCAGCAGGTGGAATTATTGAACTGGGTTTCTTTAGCCCAGAAAATTCAACAAACCGGTACCTGGGTATATGGTTCAGAAATGTATCCCCTCTAACGGTGGTGTGGGTGGCTAACCGAAATACACCTCTTGAGAATAAATTAGGAGTTCTCAAACTGAATGAAAATGGAATTCTAAAGCTTCTTAATGCTACAAACAGCACCATTTGGTCATCAAATATATCACGCAAAGCAGTGAGTAATCCAATTGCTTATCTTTCGGATTCGGGAAATTTTGTTGTGAAAAATAGACAGGAAACTAACGAAGAGCGTGTCTTGTGGCAGAGTTTTGATTATCCAGGTGATACATATGTGCCTGGAATGAAACTTGGATGGAACTTGGAGAGTGGTCTAGAGAGATATATGTCATCTTGGAAAAGCGTTGATGACCCTGCTGAGGGAGAATATGCTATCAAAATTGATATTAGAGGATATCCTCAAATATTGTTATTACAGGGAACTGATATAAAATATAGATCCGGGTTGAATGACTTGAATCAGTTGAACGTCGAAAATCGTGGTTCAAATCCTGATATCTTAAAAAAATTTGTTTTCAATGAGAAAGAGGTCTATTATAAGGCTGAGCTTCACGATAGATCGATTTTCATGGTAAAACAACTTACCCCTTCAGGCAGTGCACTGAATTTGGTTTGGACAACCCAAACAAGTACCAGATATGTTTCCTCAAATGGGGAGTACGATGAATGTGACAGTTATGCTTTTTGTGGTGCAAATTCTATATGCAATAGTGTTGACAACAATCCAACATGTGAATGCCTGAGAAGCTATGTTCCTAAGTCTCCTCACCAATGGAATGCAACAATTTGGTTTAACGGTTGTGTTCCACGCAATAAATCTAGCTACAAAAATAGTTATACGGATGGATTCTTGAAGTTGTCACACTTGAAATTGCCAGACTTCTCTTCATCATGGTTTAGCAAGACTATGAACCATGATGAATGTCGAAATTCGTGTCTTAAAAACTCTTCTTGTACGGCATATGCAAGTTCAGGTACAAGTGGTGAAGGAAGTGGCTGTATACTTTGGTTGCATGATCTAGTTGACTTGAGGAAATTCTCTGAATCGGGACAAGAATTGTATATCAGAGTCCCTTCTTCCGAATTAGATCATATTGCCCATGGAAACATCAAGAAAAAGATAGAGATCACAGTTGGTGTGATTACTTTCGGATTAGTCTCATTTGCATGCATATTTACCATAAAAAAGTCAGGGGCAGCAAGAAAATTTTACCGCAAGCATTACAAAATTAAACTGAGAAAGGAAGATGTTGATTTGACAACTTTCAGTTTGGCAGTCATAGCTAATGCTACCGAAAACTTTTCAACCAGAAACAAACTTGGAGAAGGTGGCTTTGGACCTGTATACAAGGGCACAATGATAAATGGACAAGAGTTAGCGGTGAAAAGACTTTCAAAAAAGTCTGGACAAGGGTTAGAAGAGTTAAAAAATGAAGTGGCGTTGATAGCGAAACTTCAGCACCGTAACCTTGTAAAGCTTCTGGGGTGTTGCATTGAACGAGAAGAAAAGATGTTAATTTATGAATACATGCCCAACAAAAGTTTGGACTACTTTGTTTTTGATGAAACCAGAAGGAAGTCACTAGATTGGAATAAGCGATTCAACATTGTTAATGGTATTGCTCGAGGGCTCATGTATCTTCATCAAGATTCTAGGTTGAGGATTATTCATAGAGATTTAAAAACTAGTAATATTTTACTAGACGCAAATTTGGATCCCAAAATATCAGACTTTGGCTTGGCTCGATCATTTTTGGAAGGTCAAATTGAGGCAAACACACATAGGGTGGCAGGAACATATGGTTACATGTCTCCTGAGTATGCAATTCGTGGAAATTTCTCAGTGAAATCAGATGTATTTAGTTATGGTGTTATAGTACTTGAGATTCTAAGTGGGAAAAAAAATAGAGATTTTTCAAATTCAGAACACTACAATAATCTTCTTGGACATGCATGGAGATTATGGACAGAAGAAAGGGGACTTGAATTACTGGATGAGTTGTTAGGCGAACAATGCACACCCTCTGAAGTCGCACGATGCATACATGTAGGCCTATTATGTGTACAACAAAAACCTAAAGATAGACCAGACATGTCATCAGTTGTTTTAATGTTGAACGGAGAAAAATCATTGCCAAAACCTAAGGTTCCTGGATACACCGATCTTAATTCTAGAGCAAACTCTTCGTTGGCAAATCACATATTATGCTCAGTTAATGAGGTTTCAATCACAATATTAAATGCAAGATAG 2520 0.3782 MAPMGSFQIGHSGKDNNSPELRSPWFHNITMLFIWLFLVSYLFRTATALDSLAVSQSIQDGETLVSAGGIIELGFFSPENSTNRYLGIWFRNVSPLTVVWVANRNTPLENKLGVLKLNENGILKLLNATNSTIWSSNISRKAVSNPIAYLSDSGNFVVKNRQETNEERVLWQSFDYPGDTYVPGMKLGWNLESGLERYMSSWKSVDDPAEGEYAIKIDIRGYPQILLLQGTDIKYRSGLNDLNQLNVENRGSNPDILKKFVFNEKEVYYKAELHDRSIFMVKQLTPSGSALNLVWTTQTSTRYVSSNGEYDECDSYAFCGANSICNSVDNNPTCECLRSYVPKSPHQWNATIWFNGCVPRNKSSYKNSYTDGFLKLSHLKLPDFSSSWFSKTMNHDECRNSCLKNSSCTAYASSGTSGEGSGCILWLHDLVDLRKFSESGQELYIRVPSSELDHIAHGNIKKKIEITVGVITFGLVSFACIFTIKKSGAARKFYRKHYKIKLRKEDVDLTTFSLAVIANATENFSTRNKLGEGGFGPVYKGTMINGQELAVKRLSKKSGQGLEELKNEVALIAKLQHRNLVKLLGCCIEREEKMLIYEYMPNKSLDYFVFDETRRKSLDWNKRFNIVNGIARGLMYLHQDSRLRIIHRDLKTSNILLDANLDPKISDFGLARSFLEGQIEANTHRVAGTYGYMSPEYAIRGNFSVKSDVFSYGVIVLEILSGKKNRDFSNSEHYNNLLGHAWRLWTEERGLELLDELLGEQCTPSEVARCIHVGLLCVQQKPKDRPDMSSVVLMLNGEKSLPKPKVPGYTDLNSRANSSLANHILCSVNEVSITILNAR 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03879 839 FunFam - 600 804 - -
Pste1g03879 839 SMART blect_4 55 177 IPR001480 -
Pste1g03879 839 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 489 599 - -
Pste1g03879 839 ProSiteProfiles Bulb-type lectin domain profile. 49 171 IPR001480 -
Pste1g03879 839 Pfam Protein tyrosine and serine/threonine kinase 526 793 IPR001245 GO:0004672|GO:0006468
Pste1g03879 839 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 44 174 - -
Pste1g03879 839 Pfam S-locus glycoprotein domain 251 344 IPR000858 GO:0048544
Pste1g03879 839 Pfam D-mannose binding lectin 97 203 IPR001480 -
Pste1g03879 839 Gene3D Transferase(Phosphotransferase) domain 1 600 805 - -
Pste1g03879 839 SMART ntp_6 368 447 IPR003609 -
Pste1g03879 839 SMART serkin_6 524 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03879 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Pste1g03879 839 PIRSF SRK 22 839 IPR024171 GO:0004674
Pste1g03879 839 Gene3D Phosphorylase Kinase; domain 1 497 599 - -
Pste1g03879 839 CDD STKc_IRAK 530 797 - -
Pste1g03879 839 Gene3D - 44 174 IPR036426 -
Pste1g03879 839 ProSiteProfiles EGF-like domain profile. 309 346 IPR000742 -
Pste1g03879 839 ProSiteProfiles PAN/Apple domain profile. 357 449 IPR003609 -
Pste1g03879 839 SUPERFAMILY Protein kinase-like (PK-like) 508 803 IPR011009 -
Pste1g03879 839 SUPERFAMILY alpha-D-mannose-specific plant lectins 98 208 IPR036426 -
Pste1g03879 839 Pfam PAN-like domain 369 433 IPR003609 -
Pste1g03879 839 CDD EGF_CA 311 344 - -
Pste1g03879 839 ProSiteProfiles Protein kinase domain profile. 524 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03879 839 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 33 785 - -
Pste1g03879 839 CDD B_lectin 55 177 IPR001480 -
Pste1g03879 839 CDD PAN_AP_plant 366 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03879 Pste-Chr1 19744748 19751560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03879 495 839 Receptor kinase-like Gene Family AT4G11530 53.760 4.18e-126 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03879 PK_Tyr_Ser-Thr 7.9e-47 CL0016