Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03877 TCCACTTCTATAGACCACTTAGCTGTGAGTCAATCCATCCAAGATGGTGAGACTTTGGTTTCAGCTGGGGGAATTATTGAAGTTGGTTTCTTCAGTCCTGGAAATTCAACAAGACGATACTTGGGTTTATGGTATCGGAATGTATCCCCTTTCACAGTGGTGTGGGTGGCTAACCGAAATAAACCTCTTGAGGATAAATCAGGAGTGCTGAAACTAAATGAAAAAGGGATTCTTGTGGTTCTCAACGGCACAAACAACACCATTTGGTCATCATCCAACTTATCAAGCAAACCAGCCACTGGTGCAATTGCTTATGTCTTGGATTCGGGAAACTTTTTAGTGAAAAATGGACAGGCAAGTAATGACCAGAGAATCTTGTGGCAGAGTTTTGATTATCCATGTGATACATTTCTGCCAGGGATTAGAGTTGGGTGGAACTTAAAAACTGGTCTTGAAACATCTGTATCATCTTGGAAAAGTTTTGACGATCCTGCTGAGGGAGAATATGTTGCGAAAATTGATCTTAGAGGATATCCTCAATTAATTATATTCAAGGGACAAGATATAAGATGGAGAGATGGATCATGGAATGGCTTGTCTCCAGTTGGATATCCAGCTCCAATTCCTCAAACTTTACAAACATTTGTGTTCAATGAAAAAGAAGTGTATTATGAGTTTGAGCTTCTGGATAAATCGATCTTCAAGGTATATAAACTGACCCCTTTAGGCACTGTGCAGACTTGGTTTTGGACAGCTCAAACAAGAATCCCGAAAATGATCTCATCTGGGGACCAAGATCAATGCGATAATTATGCCTTCTGTGGTGCAAATTCTGTATGCAATTATGTTGATAACAATCCAACTTGTGAATGCTTGAGAGGTTATGTTCCAAAGTCTCCTGATCAATGGAATGCAGCTAGTTGGTTTGATGGTTGTGCTTCAAGCAATAAATCTAGTTGCAAAAATAGTTCTACAGATAGCTTCTTTAAGTACCCGCACTTGAAATTGCCAGACACGTCTTCATCATGGTTTAATAAGACTATGAACCTCGAGGAATGTCAGAAGTTATGTCTTAAAAACTGTTCCTGTACGGCATTTGCGAATCTAGATATCCGTAATGGAGGAAGTGGCTGTCTTCTTTGGTTTAATAACCTATTTGATGTGAGGACATTACCTGGTTGGGGACAAGACGTGTATATCAGAGTCCCAGCTACAGAATTAGATCATGCTGCCCATGGAAATAGCGAGAAAAAGATTGCAGAAATTACAGTTGGTGTGATTATTTTTGTATCAGTCACCTGCGCATGCATATTTGTAATAAAAAATCAAGGGAAAGCAAGAAAACTTTTCAGCAAGCATTACAAAATTAAACAGAAAAAGGAAGATGTTGATTTTCCTACTTTCAATCTGTCTGTTTTAGTTAATGCTACTGAAAATTTTTCGGAAAAAAACAAGCTTGGGGAAGGAGGCTTTGGACCAGTATACAAGGGCACTTTGATAGATCAACAAAGGATAGCGGTGAAACGGCTTTCAAAGACGTCTGGACAAGGGTTAGAAGAATTCAAAAATGAAGTAGCATTGATTGCGAAACTTCAACATCGTAACCTTGCATGGAAATTATGGACTGAAGACAGGGCAGTAGAACTAGTGGATGAGTTTTTAGCAGAACAATGCTCACTCTCTGAAGTCACAAGATGCATTCAGGTAGGCCTATTATGTGTTCAGCAAAAACCAAAAGATAGGCCTGACATGTCATCAATTGTTTTAATGTTGAATGGTGAAAAAGTGTTGCCAAAGCCAAAGGCTCCTGGATTTTACATTGAAACAGATCTTAAATCTGAAGCAAACTCTTCACCATCTAATCATGGACTATGCTCCGTTAATGATGTTTCCATCACACATCATTATGTTACTTATTTGGTTCCTACTATTCTCCTACAATACTACAGCTTCAGCTTCATGACTCAATCCATCCGAGATGGTGAGACTCTGGTTTCAGCTGGTGGAATTATTGAAGTGGGTTTCTTCAGTCCAGGAAATTCAACAAAACGATACTTGGGTATATGGTACACAAATGTCTCCCCTTATACAGTGGTATGGGTGGCTAACCGAAATACACCTCTTGTGAATAACTCAGGAGTTTTGAAACTCAATGAAAGAGGAATTCTTGAGCTTCTCAATGGTACAAACAGAACCATTTGGTCATCCAATATATCAAGCAAAGCAGTGAGAAACTTTGTAGTGAAAAATGGACAGAAAACTAATGAGGAGAGTATCTTGTGGCAGAGTTTTGATTATCCAGGTGATACATTGTTGCCAGGAATGAAACTTGGATGGAACTTAGAGACTGGTCTTGAAACAACTTTATCATCTTGGAGAAGTGTTGATGATCCTGCCAAGGGAGAATACGCAGTGAAAATTGAACTTAGAGGATATCCTCAAATAATGAAGTACAAAGGATCTGATATAAAAGCGAGGGCAGGGTCATGGAATGGCTTGGCAGTAGTAGGAAATCCAGGTCAAAGTTATGATACATCAGCAAAATTTGTGTTCAATGAAAAAGAGGTGTATTATGAGTATGACTTTCATGTTCTTTCGGCTTTCAATGTATATAAACTGACTCCTTCAGGCACAGGGCAGGATTTCATGTGGACAAGTCAAAGAAGCACCCGGCAAGTTGTCTCAACTGGGGAGGATGATCAATGCGAAAATTATGCCTTTTGTGGAGCAAATTCTATATGCAATTATGATGGAAATGTTCCAATTTGTGAATGCCTGAGAGGATATGCTCCCAAATCTCCTGATCAATGGAACATAGCAATTTGGATTGATGGTTGTGTTCCCAAAAATAAATCTAATTGTGAAATCCTACACACACTGAAATTGCCAGACACATCTTTCACATGGTTTAATAAGGCCATGAACCTTGATGAATGTCAGAAATCATGTCTTAAAAATTGTTCTTGCACAGCATATGCAAATTTAGATATCCGTGATGGAGGAAGTGGTTGTCTTCTTTGGTTAAACACTCTAGTTGACATGAGGAGTTTCTCTCAATGGGGACAAGACTTGTATATCAGAGTCCGTGCTTCAGAATTAGATCATTCTGTCCATGGAAACAAGAAGAAAAAGAGATTAGAAATCACTGTTGGTGTGATTACTTTTGGACTAGTCACCTGTGCATGCATATTTACAATAAAATATTCAGGGATTACAAAAAAACTTAGCAAAAAAAATTCCAAAATTAAGGAGAAAAAGGAAGAGGTTGATTTCCCAACTTTCGATTTCTCAGTGTTATCCAATGCTACCGAAAGCTTTTCAACCAAAAATAAGCTTGGCGAAGGTGGCTTTGGACCCGTATACAAGGGAACGTTGATAAATGGAAAAGAGTTAGCAGTGAAAAGGCTATCAAATAAGTCTGTACAAGGGATAGAAGAGTTAAAAAATGAAGTAACATTGATCGCTAAACTTCAACACCGTAATCTTGTAAAGCTTTTAGGTTGTTGCATAGAAGGAGAAGAAAGAATGTTAATTTACGAATACATGACCAACCAAAGCTTGGATTACTTTGTTTTTGATGCAAATTTGGATCCCAAAATATCAGACTTTGACTTAGCTCGATCTTTGTTGGGAGATCAAATTGAGACAAACACAAATAGGATGGCTGGAACATATGGTTACATGTTTCTTGAGTATGCTGCTCGTGGACATTTCTCAGTGAAATCAGATGTCTTTAGTTACGGTGTGATAGTACTAGAGATACTAAGTGAGAAGAAAAATAGAAAATTTTTAGATCCCAAACACTACAATAATCTTCTTGGACATGCATGGACATTATGGACAGAAGAGAGGGCACTGGAACTACTGGATGAGTGT 3876 0.3836 STSIDHLAVSQSIQDGETLVSAGGIIEVGFFSPGNSTRRYLGLWYRNVSPFTVVWVANRNKPLEDKSGVLKLNEKGILVVLNGTNNTIWSSSNLSSKPATGAIAYVLDSGNFLVKNGQASNDQRILWQSFDYPCDTFLPGIRVGWNLKTGLETSVSSWKSFDDPAEGEYVAKIDLRGYPQLIIFKGQDIRWRDGSWNGLSPVGYPAPIPQTLQTFVFNEKEVYYEFELLDKSIFKVYKLTPLGTVQTWFWTAQTRIPKMISSGDQDQCDNYAFCGANSVCNYVDNNPTCECLRGYVPKSPDQWNAASWFDGCASSNKSSCKNSSTDSFFKYPHLKLPDTSSSWFNKTMNLEECQKLCLKNCSCTAFANLDIRNGGSGCLLWFNNLFDVRTLPGWGQDVYIRVPATELDHAAHGNSEKKIAEITVGVIIFVSVTCACIFVIKNQGKARKLFSKHYKIKQKKEDVDFPTFNLSVLVNATENFSEKNKLGEGGFGPVYKGTLIDQQRIAVKRLSKTSGQGLEEFKNEVALIAKLQHRNLAWKLWTEDRAVELVDEFLAEQCSLSEVTRCIQVGLLCVQQKPKDRPDMSSIVLMLNGEKVLPKPKAPGFYIETDLKSEANSSPSNHGLCSVNDVSITHHYVTYLVPTILLQYYSFSFMTQSIRDGETLVSAGGIIEVGFFSPGNSTKRYLGIWYTNVSPYTVVWVANRNTPLVNNSGVLKLNERGILELLNGTNRTIWSSNISSKAVRNFVVKNGQKTNEESILWQSFDYPGDTLLPGMKLGWNLETGLETTLSSWRSVDDPAKGEYAVKIELRGYPQIMKYKGSDIKARAGSWNGLAVVGNPGQSYDTSAKFVFNEKEVYYEYDFHVLSAFNVYKLTPSGTGQDFMWTSQRSTRQVVSTGEDDQCENYAFCGANSICNYDGNVPICECLRGYAPKSPDQWNIAIWIDGCVPKNKSNCEILHTLKLPDTSFTWFNKAMNLDECQKSCLKNCSCTAYANLDIRDGGSGCLLWLNTLVDMRSFSQWGQDLYIRVRASELDHSVHGNKKKKRLEITVGVITFGLVTCACIFTIKYSGITKKLSKKNSKIKEKKEEVDFPTFDFSVLSNATESFSTKNKLGEGGFGPVYKGTLINGKELAVKRLSNKSVQGIEELKNEVTLIAKLQHRNLVKLLGCCIEGEERMLIYEYMTNQSLDYFVFDANLDPKISDFDLARSLLGDQIETNTNRMAGTYGYMFLEYAARGHFSVKSDVFSYGVIVLEILSEKKNRKFLDPKHYNNLLGHAWTLWTEERALELLDEC 1292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03877 1292 SMART ntp_6 323 402 IPR003609 -
Pste1g03877 1292 SMART ntp_6 954 1028 IPR003609 -
Pste1g03877 1292 SUPERFAMILY Protein kinase-like (PK-like) 1091 1262 IPR011009 -
Pste1g03877 1292 ProSiteProfiles EGF-like domain profile. 898 935 IPR000742 -
Pste1g03877 1292 ProSiteProfiles PAN/Apple domain profile. 954 1029 IPR003609 -
Pste1g03877 1292 Gene3D Hepatocyte Growth Factor 319 397 - -
Pste1g03877 1292 Gene3D Hepatocyte Growth Factor 948 1025 - -
Pste1g03877 1292 Gene3D Phosphorylase Kinase; domain 1 1079 1181 - -
Pste1g03877 1292 Gene3D Phosphorylase Kinase; domain 1 453 541 - -
Pste1g03877 1292 Pfam Domain of unknown function (DUF3403) 596 633 IPR021820 GO:0004674
Pste1g03877 1292 ProSiteProfiles PAN/Apple domain profile. 320 403 IPR003609 -
Pste1g03877 1292 SMART blect_4 655 767 IPR001480 -
Pste1g03877 1292 SMART blect_4 10 133 IPR001480 -
Pste1g03877 1292 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 130 - -
Pste1g03877 1292 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 319 402 - -
Pste1g03877 1292 SUPERFAMILY alpha-D-mannose-specific plant lectins 53 164 IPR036426 -
Pste1g03877 1292 CDD B_lectin 655 767 IPR001480 -
Pste1g03877 1292 CDD PAN_AP_plant 325 403 - -
Pste1g03877 1292 Pfam Protein tyrosine and serine/threonine kinase 1199 1258 IPR001245 GO:0004672|GO:0006468
Pste1g03877 1292 Pfam Protein tyrosine and serine/threonine kinase 483 537 IPR001245 GO:0004672|GO:0006468
Pste1g03877 1292 Pfam Protein tyrosine and serine/threonine kinase 1108 1191 IPR001245 GO:0004672|GO:0006468
Pste1g03877 1292 CDD PAN_AP_plant 961 1028 - -
Pste1g03877 1292 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 450 553 - -
Pste1g03877 1292 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1071 1181 - -
Pste1g03877 1292 ProSiteProfiles Bulb-type lectin domain profile. 4 127 IPR001480 -
Pste1g03877 1292 Pfam S-locus glycoprotein domain 826 933 IPR000858 GO:0048544
Pste1g03877 1292 Pfam S-locus glycoprotein domain 191 299 IPR000858 GO:0048544
Pste1g03877 1292 ProSiteProfiles EGF-like domain profile. 264 301 IPR000742 -
Pste1g03877 1292 Gene3D Transferase(Phosphotransferase) domain 1 1186 1292 - -
Pste1g03877 1292 ProSiteProfiles Bulb-type lectin domain profile. 649 768 IPR001480 -
Pste1g03877 1292 CDD B_lectin 10 133 IPR001480 -
Pste1g03877 1292 Gene3D - 2 130 IPR036426 -
Pste1g03877 1292 Gene3D - 653 764 IPR036426 -
Pste1g03877 1292 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 947 1028 - -
Pste1g03877 1292 SUPERFAMILY alpha-D-mannose-specific plant lectins 698 798 IPR036426 -
Pste1g03877 1292 Pfam PAN-like domain 955 1014 IPR003609 -
Pste1g03877 1292 Pfam PAN-like domain 320 388 IPR003609 -
Pste1g03877 1292 SUPERFAMILY Protein kinase-like (PK-like) 465 537 IPR011009 -
Pste1g03877 1292 Pfam D-mannose binding lectin 697 793 IPR001480 -
Pste1g03877 1292 Pfam D-mannose binding lectin 52 159 IPR001480 -
Pste1g03877 1292 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 646 1261 - -
Pste1g03877 1292 ProSiteProfiles Protein kinase domain profile. 1106 1292 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03877 Pste-Chr1 19696563 19707352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03877 537 636 Receptor kinase-like Gene Family AT4G05200 40.909 1.65e-14 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03877 S_locus_glycop 2.8e-17 No_clan