Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03876 CCACTCTATATAACCCGTTTTCCTCCCCAAAGCACTCACACACCGACACCCCTTTCATTTTTCAGTTTCACAACACTTGATACATATACACATTTATATATATATATATATATACATATCACTATCTTATTTTTCTATTGTTATTACACCTCTTCTCTCTTTCATTGTTGTGTCCAAAATCACTTCCTCTACCATGCAAATGCTAGCTATTTGTTGTTTAAATTTGGACTCTCTTCATCACTCCCTTTTTCTCATCGTCACATCCCTGCTTTTCACTTCTTTGTTTCTTCTAATCCCTTTCCTCCAATGGTGGCAACACCGCAAGCACAAAAAATTGCCCCCTGGTTCCATGGGTTGGCCCTACCTTGGAGAAACCCTCAAGCTCTACACTGAAAACCCAAATTCCTTCTTCTCTAACCGCCAAAAACGGTATGGAGATATATTCAAGACAAACATATTGGGTTGTCCTTGTGTGATGATATCAAGCCCTGAGGTAGCTAGAATTGTGCTTGTGACTCAAGCACATCTTTTCAAGCCAACATACCCTCCAAGCAAAGAGAGGTTGATAGGACCAGAGGCTGTGTTCTTTCAACAAGGTGCCTATCACTCCATGCTCAAGAGGCTTGTTCAGGCCTCTTTTTTACCCTCCACTATTAAGCACTCAGTCTCTGAGGTTGAGCAAATTGTCGTCAAACTGGTGCCAACTTGGGCCAACAAAACTATCAACACCTTGCAAGAGATGAAAAAGTATGCTTTTGAAGTGGCTGCAATCTCAGCCTTTGGTGAAATAAAAGAGCTTGAAATGGAAGAAATAAGACAGCTCTATCGATGCTTAGAGAAGGGTTACAACTCTTATCCATTACATGTTCCTGGGACTTCTTATTGGAAAGCAATGAAGGGAAGGAAGAAACTGAATGAAAGCATAAGGAGGATAATAGAGAGAAGAAAGGAAAGTTCAAAGAATGGAGGGGGGTTATTGGGAGTTCTATTGGAAGCAAGGGGTGACAAGAAGAAGAAGAAGTACCAACAGCTAAGTGATTCTCAAGTTGCTGATAACCTAATTGGTGTCATCTTTGCTGCCCATGACACCACTGCCAGTGCTCTAACATGGGTCCTCAAGTACTTGCATGACAACACCATTCTATTGGAAGCTGTCACGAAAGAACAAGAAGGAATAAAAAACAAACTAGCGATGGAAAATCGTGGTCTTTCGTGGGATGATACAAGACAGATGCCATTCACTAGCCGGGTGATCCAAGAAACACTGAGAAGTGCAAGCATTTTGTCATTCACATTCAGAGAAGCAGTAACAGATGTTGAGTTGGAAGGTTACACTATTCCAAAAGGTTGGAAGGTCCTTCCACTTTTTAGAAGCATTCATCACTCTGCTGACTTCTTTCCTCAGCCAGAAAAGTTTGACCCTTCAAGATTCGAGGTGCCACCGAGACCTAACACTTACATGCCTTTTGGAAATGGAGTCCACTCTTGTCCAGGCAGTGAGCTGGCTAAGCTTGAACTTCTTGTCCTCCTTCATCATCTCACTCTTTCTTACAGGTGGCAAGTTGTGGGAAATGAAGATGGAATACAGTATGGTCCCTTTCCTGTGCCCAAACATGGATTACCAGTGAAGATAACTCCGAGAAGCAAGATATTTACTTGATGTTGGAAACTTGTTAACCAGACTCTTTGATAATGAATTCAGAACATGTTAAGAAAGTGTGGGGCCAAAGCAATTTGTCCCCTATCAAAATAATCAATATTTTTTTTTCTTTTTTTATTTTGTTGTAGAGATATAAAGATTCTTCTCACATTGATATAGGCCCTATATGAGACGAATCTAGCTAGTAGCTACCTCTGATTAATTACACTCTGCATGATCAATATGTTTGTGCGGAAAAATAATGTACAAGTAAATAAAATATTCAAAATTGTAATATGTGAATAATTAAATTTATTTATGTTTAGATTGAAGAATAATA 1979 0.3967 MQMLAICCLNLDSLHHSLFLIVTSLLFTSLFLLIPFLQWWQHRKHKKLPPGSMGWPYLGETLKLYTENPNSFFSNRQKRYGDIFKTNILGCPCVMISSPEVARIVLVTQAHLFKPTYPPSKERLIGPEAVFFQQGAYHSMLKRLVQASFLPSTIKHSVSEVEQIVVKLVPTWANKTINTLQEMKKYAFEVAAISAFGEIKELEMEEIRQLYRCLEKGYNSYPLHVPGTSYWKAMKGRKKLNESIRRIIERRKESSKNGGGLLGVLLEARGDKKKKKYQQLSDSQVADNLIGVIFAAHDTTASALTWVLKYLHDNTILLEAVTKEQEGIKNKLAMENRGLSWDDTRQMPFTSRVIQETLRSASILSFTFREAVTDVELEGYTIPKGWKVLPLFRSIHHSADFFPQPEKFDPSRFEVPPRPNTYMPFGNGVHSCPGSELAKLELLVLLHHLTLSYRWQVVGNEDGIQYGPFPVPKHGLPVKITPRSKIFT 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03876 488 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03876 488 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03876 488 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03876 488 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03876 488 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03876 488 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03876 488 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03876 488 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03876 488 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03876 488 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03876 488 FunFam Abscisic acid 8 38 482 - -
Pste1g03876 488 SUPERFAMILY Cytochrome P450 39 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03876 488 Gene3D Cytochrome P450 40 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03876 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Pste1g03876 488 Pfam Cytochrome P450 49 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g03876 488 PANTHER CYTOCHROME P450 26 45 472 - -
Pste1g03876 488 Coils Coil 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03876 Pste-Chr1 19689102 19700693 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03876 18 478 Cytochrome P450 AT3G19270 54.978 0.0 540