Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03867 ACTATTGTAATGGCAAACCATAAGGTGTTTGTTCTGTACACTCTCCTATTATCTTTCATTATCCTTCCCAAGGTCATAGCCCTGAGGAGCGTAACTCCTGGTGTATCCATCCATTACAACGAGACCCTGGTTTCAATATCTGGAATTTTTGAAGCCGGGTTCTTTAGCATAGGGAATTCACAAAATCAATATTTTAGTATATGGTACAAGAGTCTAAAACCAAGATCAATTGTATGGGTTGCTAACAGAGACACCCCAATTGCAAACTCCACTGCAACGTTTGAAGTCACTGATGCTGGAAATCCAGTTATAGTTGATGGCTCAGGGATCACAATATGGTCCTCCAATGCATCAACAACTGCACAGAATCCTGTTCTTTTGATGCTAGACACAGGGAACCTTGTTGTAAGAAATGGTGGGAGTAACAAGATTGTTGATCGAGTTAGAGGGGAGCATAATTCTCTAACATGTTGGAGAAGCACTGAAGATCCTGAAAGAGGTGAATTTTCATATCATTTGGATATGGCCGTGGGGTCAAGAAGAATTTTCAGACTAGGCTCATGGAATGGTTTTTTCTTCAGTGGGGTGCCTTGGGAAACACTCTACAATTTCTTTACTTTCTCCTTTGAGATAAAAGAGAAGGAAGTTATATATAAATATGAGATCTTGAATGATTCAATTATTACAAGATTCATGATCACTCCCACAGGCAGTGTGCAACGTTTCCTGTGGTCATATCAGACAGAAACTTGGCAACTTTTCCTGGGTGGTCCGGTGGACCAGTGTGATAACTATGCCTTTTGTGGTCCTAATTCTAATTGCAATGTTAATAACTCACCAATATGTCGGTGCCTCCCAGGTTTCACACCCAAATCTCCTGAAAAATGGAGTGTGTCGAATTGGACTGATGGGTGTGTTAGGAAGGTGAGTTTGGATTGTGATAATAGAGATGGGTTTCTCAAGATCACAGGAGTGAGGACGCCAGACACAACTTCTTCGTGGTTTGATAAGCACATGAATCTTCAAGAATGTGAGAATCAGTGTTTGAAAAACTGCAGCTGCATAGCATATGCACATTTGGATATTAGACATGGTGGAATCATTGAACAAGGAATAGAGATTGCAGCATTTAGGAAATATTCTACCTCAGAAGTGGAATCTGATGACAAAAACTTGAAGACAGTCATAAGAATGCATCTAGCAGGAATTATGGTAGGAATTGGAATATTGAGCATCACAATAACTAGCTATGTCATCTATCTAAAGAGGAGAAAACATAATAAGGACGAAGTGATTAACAAGGAGGACCATATTGAGAAATATGAAAAAGAAAGCATTGACTTACCAATATATGATTTTTCAACCGTAGCTAATGCTACAGATCACTTCTCTCCCAGTAATATATTGGGAGAAGGTGGATATGGCCCAGTTTACAAGTTTTGTTACTTTGCCAATCTTCAACATCGAAATCTTGTGAAACTTATCGGTTGTTGCATTGAGAATGATGAAAGAATCCTAATCTATGAATACATGCCTAATAGAAGTTTGGACAACTTTATTTTTAATCAAACAAGAAGCAAAGTATTGGATTGGAAAAAACGTTTGCAGATTATAAGCCGCATTGCTAGAGGTCTTGTTTATCTTCATCAAGATTCTAGACTAAGGATTGTCCATAGAGATTTAAAAGCTAGCAACATTGTTCTTGACAATGATCTGAATCCAAAAATATCAGACTTTGGATTAGCCAGAGCTTTTGGTGGTGATGATCATTCTGTGGTCAAAACAATGAGAGTAATTGGAACACATGGTTACATGCCCCCAGAGTATGCAGTATTTGGGACTTTTTCTGTCAAGTCTGATGTCTTCAGTTTTGGTGTTATAGTACTAGCGATGGCATGGAGACTGTGGAGTGAGGATAGACCATTGGAGCTGATAGAAGATTCACTCAGCAATTCTGTTATTGCAGCTGAGGCATTAAGATGTATTCACATAGGGCTCTTATGTAGAGCAGATGATAGACCAGACATGTCATCTGTTGTTCTTTTGTTGAATGGAGAGATAGCATTGCCTAATGCAAAAGAACCTGGGTTTTATCCACATGAAGTTTCATCAAGCAAACAGGAACTATCTTCAACAAATGAAATTTCAATTTCATTACCACTGGCAAGATATTTCCTGTTAAGTATTATTCCCAGAGTCATTGCCCTGAGAATCATCACTCCATGCCAATCCATTCTTTACAACCAGACCCTCGTTTCAGAATCTGGAAATTTTGAAGCTGGGTTCTTCAGCATAGGGAATTCACGAAGTCAATATTTTTGTATATGGTACAAGAGTCTAACACCAAAGACTATTGTATGGGTAGCCAATAGAGACAGCCCAGTTGATAAGTCCACAGCAATGTTCAAAATCACTGATGCAGGAAATCCATTTATAGTTGATGGCTCAGGGACCACAATTTGGTTCTCCAATGCAACAAAAACATTACAGAATCCTGTGCTATTGCTTCAAGACACTGGAAACCTTGTTGTAGGAAGTGGTGAGAACATTGTGTGGCAAAGCTTTGATTACCCTGGTGATACTTTACTCCCTGGTATGGTACTTCATGGTAATAGAGTTAGTGGTGAGCATAATTCTCTCACTTCTTGGAGAAACACTGCAGATCCTGGGAGAGGTGAATTTTCATATCATTTAGATAGTCATGGTTATCCTCAACTAGTTATCATGAAGGGGTCCAAATTAATATACAGATTAGGCTCCTGGAATGGTTTTCTCTTCAGTGGGATTCCTTGGGAAATACTTCAAAATTATTTTAATTTCTCTTTTGAGTTAGCTGAACAGGAAATTCATTTTAAATATGAGATTTTGGATGATTGGATTGTTTCAAGATACATGATCACTCCCACAGGTGGTGTGCAACGTTTTATGTGGTTATCTCAGGCAGAAACTTGGCTGCTTCTCCAGGCTGCTCCAACGAATCAGTGTGATAACTATGGCTTTTGTGGTGCTAATTCTGATTGCAGTGATACTCACTCTCCAACATGTGAGTGCCTTCCAGGTTTCACTCCCAAATCTCCAGAGAAATGGAGTTTGTCAATTTGGACTGATGGGTGTGTTCGGAAGGTGAATTTGGATTGTGATAGCAGAGATGGGTTTGTTAAGCTCACGAGTATGATGCGGCCGGACACATCTTCATCTTGGTTTGATGAGAACATGGATCTCCAGGAATGTGCGAATCAGTGCTTGAAAAACTGCAATTGCATAGCATATGCAAATGTGGATATTAGACATGGTGGAAGTGGCTGCTTGATTTGGTTTAACAACATCATGGACATGAGGAAAGAAACTTCTATAGGACAAGATATTTACATAAAAGTGGCTGCTTCAGAGTTAGGGTACTCAACAAATAATGCAAACAAGAATCGGGTATTGAACATTCTGGTAGGAATTGGGATACTTGTATTGGGCATCACCATAGTTGGATGTATCATCTATCTGAAGAGGAAGAAACTTATGAAGTCAGGTATGGATAAAATAATTAATCAGGAAGACGATATTGAAAAATATGAGAATGGAAGCATTGACTTGCCAATATTTGATTTTTCAACCTTAGTTAATGCCACGAATAATTTCTCTACTAGTAAGATATTGGGAGAAGGTGGATATGGCCCTGTTTACAAGGGTGTACTAGCAAATGGAAAAGAAATTGCCATCAAGCGACTTTCTTTGAATTCAGGACAAGGACCAAAGGAATTCAGAAATGAAGTTTTGTTGGTTGCCAATCTTCAACATAGAAATCTTGTGAAACTTCTTGGTTATTGCATTGAAAATGTTGAAAGAATCCTAATTTATGAGTTCATGCCTAACAAAAGTTTAGACAACTTTATCTTTGAGAAAACTAGAAGCAAAGTGATGGAATGGAATAAGCGTTTGCAAATCATAAGCGGGATTGCTCGAGGGCTTGTCTATCTTCATCAAGATTCTAGACTAAGGATCATCCATAGAGATTTAAAAACCAGTAACATTCTTCTTGACAGTGATATGAACCCAAAAATCTCAGACTTTGGACTGGCCAGGACTTTTGGTGGTGATCATTCTGTGGCCAAGACAGAAAGAGTTGCGGGAACTCATGGTTACATGTCTCCAGAGTATGCAGTATATGGGACATTTTCTGTGAAGTCTGATGTCTTCAGCTATGGCGTTATTGTACTAGAGATGGTTAGTGGGAGAAAGAACAGAGAATTTTCTGACCCACAACATAATCTCAACCTTCTTGGACACGCATGGAAACTGTGGAGTGAGGATAGAACATTGGAACTGATAGACGAGTCCCTCAGTGATTCTGTTATTGCTGCAGAGGCATTAAGATGTGTTCACATAGGGCTCTTGTGTGTGCAAGAGAGAGCAGATGATAGGCCAGACATGTCATCTGTTGTTATAATGTTGAATGGAGAGAGAGCATTGGCTAATCCAAAACAACCAGGTTTTTTTCCACATGAAGTTCCATCAAGCAAACATGAATTGTCTTCAATAAATGAACTTTCCATTTCATTTTCACTTATTCTTCTTCAAACAACACCAATTAACCATTTGAGCCGTTTCAATGCTTGCAAGAAATTATCACAACACGATTATCCATCTAAAGAGAAAGGATCACAAGATGAAGAGAATGGTTCACAAGCTGACGTGGCTGCCAATTTGTTAGTTGTTGATACCTTGTCTCCTGGCAGTTGGCCCTTGTCCCCTGGGCGTTGGGGTTCTGACATTGGAAGGACTGGTTTTGGATTCATGGACAGAATTCATGAAGTTGTTCCTATCGATAAACGACCTGAACTGCTTCAAATGTTGTCAAAAGGAACCTTCACCTTGAGGAAAATACCCTTTGTTCCTGACATTGACATAATGCTAGTGAGTGTGCAAGATAGATCAGATGATAGGCTAGACATGCCCTCTGTTCTAATGTTGAAGGGTGGTAGAGCATTGCCTAATCTGAAACATGAGTTTTAA 5007 0.3921 TIVMANHKVFVLYTLLLSFIILPKVIALRSVTPGVSIHYNETLVSISGIFEAGFFSIGNSQNQYFSIWYKSLKPRSIVWVANRDTPIANSTATFEVTDAGNPVIVDGSGITIWSSNASTTAQNPVLLMLDTGNLVVRNGGSNKIVDRVRGEHNSLTCWRSTEDPERGEFSYHLDMAVGSRRIFRLGSWNGFFFSGVPWETLYNFFTFSFEIKEKEVIYKYEILNDSIITRFMITPTGSVQRFLWSYQTETWQLFLGGPVDQCDNYAFCGPNSNCNVNNSPICRCLPGFTPKSPEKWSVSNWTDGCVRKVSLDCDNRDGFLKITGVRTPDTTSSWFDKHMNLQECENQCLKNCSCIAYAHLDIRHGGIIEQGIEIAAFRKYSTSEVESDDKNLKTVIRMHLAGIMVGIGILSITITSYVIYLKRRKHNKDEVINKEDHIEKYEKESIDLPIYDFSTVANATDHFSPSNILGEGGYGPVYKFCYFANLQHRNLVKLIGCCIENDERILIYEYMPNRSLDNFIFNQTRSKVLDWKKRLQIISRIARGLVYLHQDSRLRIVHRDLKASNIVLDNDLNPKISDFGLARAFGGDDHSVVKTMRVIGTHGYMPPEYAVFGTFSVKSDVFSFGVIVLAMAWRLWSEDRPLELIEDSLSNSVIAAEALRCIHIGLLCRADDRPDMSSVVLLLNGEIALPNAKEPGFYPHEVSSSKQELSSTNEISISLPLARYFLLSIIPRVIALRIITPCQSILYNQTLVSESGNFEAGFFSIGNSRSQYFCIWYKSLTPKTIVWVANRDSPVDKSTAMFKITDAGNPFIVDGSGTTIWFSNATKTLQNPVLLLQDTGNLVVGSGENIVWQSFDYPGDTLLPGMVLHGNRVSGEHNSLTSWRNTADPGRGEFSYHLDSHGYPQLVIMKGSKLIYRLGSWNGFLFSGIPWEILQNYFNFSFELAEQEIHFKYEILDDWIVSRYMITPTGGVQRFMWLSQAETWLLLQAAPTNQCDNYGFCGANSDCSDTHSPTCECLPGFTPKSPEKWSLSIWTDGCVRKVNLDCDSRDGFVKLTSMMRPDTSSSWFDENMDLQECANQCLKNCNCIAYANVDIRHGGSGCLIWFNNIMDMRKETSIGQDIYIKVAASELGYSTNNANKNRVLNILVGIGILVLGITIVGCIIYLKRKKLMKSGMDKIINQEDDIEKYENGSIDLPIFDFSTLVNATNNFSTSKILGEGGYGPVYKGVLANGKEIAIKRLSLNSGQGPKEFRNEVLLVANLQHRNLVKLLGYCIENVERILIYEFMPNKSLDNFIFEKTRSKVMEWNKRLQIISGIARGLVYLHQDSRLRIIHRDLKTSNILLDSDMNPKISDFGLARTFGGDHSVAKTERVAGTHGYMSPEYAVYGTFSVKSDVFSYGVIVLEMVSGRKNREFSDPQHNLNLLGHAWKLWSEDRTLELIDESLSDSVIAAEALRCVHIGLLCVQERADDRPDMSSVVIMLNGERALANPKQPGFFPHEVPSSKHELSSINELSISFSLILLQTTPINHLSRFNACKKLSQHDYPSKEKGSQDEENGSQADVAANLLVVDTLSPGSWPLSPGRWGSDIGRTGFGFMDRIHEVVPIDKRPELLQMLSKGTFTLRKIPFVPDIDIMLVSVQDRSDDRLDMPSVLMLKGGRALPNLKHEF 1668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03867 1668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 556 568 IPR008271 GO:0004672|GO:0006468
Pste1g03867 1668 Pfam D-mannose binding lectin 784 884 IPR001480 -
Pste1g03867 1668 Pfam D-mannose binding lectin 77 143 IPR001480 -
Pste1g03867 1668 SMART egf_5 994 1039 IPR000742 -
Pste1g03867 1668 SMART egf_5 261 306 IPR000742 -
Pste1g03867 1668 CDD B_lectin 748 858 IPR001480 -
Pste1g03867 1668 CDD EGF_CA 993 1025 - -
Pste1g03867 1668 ProSiteProfiles Bulb-type lectin domain profile. 736 857 IPR001480 -
Pste1g03867 1668 Pfam S-locus glycoprotein domain 183 292 IPR000858 GO:0048544
Pste1g03867 1668 Pfam S-locus glycoprotein domain 916 1025 IPR000858 GO:0048544
Pste1g03867 1668 Gene3D - 27 161 IPR036426 -
Pste1g03867 1668 Gene3D - 735 855 IPR036426 -
Pste1g03867 1668 ProSiteProfiles Bulb-type lectin domain profile. 28 149 IPR001480 -
Pste1g03867 1668 Gene3D Transferase(Phosphotransferase) domain 1 512 690 - -
Pste1g03867 1668 Gene3D Transferase(Phosphotransferase) domain 1 1287 1493 - -
Pste1g03867 1668 Coils Coil 424 444 - -
Pste1g03867 1668 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1287 1490 - -
Pste1g03867 1668 SUPERFAMILY Protein kinase-like (PK-like) 446 682 IPR011009 -
Pste1g03867 1668 SUPERFAMILY alpha-D-mannose-specific plant lectins 784 923 IPR036426 -
Pste1g03867 1668 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 734 1472 - -
Pste1g03867 1668 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1045 1126 - -
Pste1g03867 1668 CDD PAN_AP_plant 309 368 - -
Pste1g03867 1668 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1176 1286 - -
Pste1g03867 1668 Gene3D Phosphorylase Kinase; domain 1 481 511 - -
Pste1g03867 1668 CDD EGF_CA 259 292 - -
Pste1g03867 1668 CDD PAN_AP_plant 1042 1127 - -
Pste1g03867 1668 Gene3D Phosphorylase Kinase; domain 1 432 480 - -
Pste1g03867 1668 Pfam PAN-like domain 313 366 IPR003609 -
Pste1g03867 1668 Pfam PAN-like domain 1046 1112 IPR003609 -
Pste1g03867 1668 ProSiteProfiles Protein kinase domain profile. 399 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03867 1668 SMART ntp_6 314 391 IPR003609 -
Pste1g03867 1668 SMART ntp_6 1047 1126 IPR003609 -
Pste1g03867 1668 ProSiteProfiles PAN/Apple domain profile. 313 392 IPR003609 -
Pste1g03867 1668 Pfam Protein kinase domain 1212 1412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03867 1668 ProSiteProfiles Protein kinase domain profile. 1211 1496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03867 1668 SMART blect_4 34 164 IPR001480 -
Pste1g03867 1668 SMART blect_4 742 858 IPR001480 -
Pste1g03867 1668 SUPERFAMILY Protein kinase-like (PK-like) 1192 1482 IPR011009 -
Pste1g03867 1668 CDD B_lectin 40 144 IPR001480 -
Pste1g03867 1668 FunFam cysteine-rich receptor-like protein kinase 10 511 631 - -
Pste1g03867 1668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1332 1344 IPR008271 GO:0004672|GO:0006468
Pste1g03867 1668 ProSiteProfiles EGF-like domain profile. 258 294 IPR000742 -
Pste1g03867 1668 ProSiteProfiles PAN/Apple domain profile. 1046 1127 IPR003609 -
Pste1g03867 1668 SMART serkin_6 463 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03867 1668 SMART serkin_6 1211 1480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03867 1668 Gene3D Phosphorylase Kinase; domain 1 1185 1286 - -
Pste1g03867 1668 Pfam Protein tyrosine and serine/threonine kinase 483 629 IPR001245 GO:0004672|GO:0006468
Pste1g03867 1668 CDD STKc_IRAK 1217 1484 - -
Pste1g03867 1668 ProSiteProfiles EGF-like domain profile. 991 1027 IPR000742 -
Pste1g03867 1668 FunFam Os04g0303100 protein 775 915 - -
Pste1g03867 1668 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 174 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03867 Pste-Chr1 19585562 19604370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03867 451 718 Receptor kinase-like Gene Family AT3G45860 44.892 3.85e-78 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03867 Pkinase 6.7e-46 CL0016