Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03862 TCATTATTGGTTCCAAACATAATGGTGCATAGCATCATAGTGTTATGTACTTGGTTCTTATTATTCTTTGACATGTTGAGAACATCCACTTCATTAGACAGTTTGAAAGTGAGTCAATCTATCCAAGATGATGAGACTTTGGTTTCAGCTGGTAGAATTACTGAACTGGATTTCTTTAGCCCAGGAAATTCAACAAGAAGATACTTGGGTATATGGTTCAGAAATGTATCCCCTATAACTGTGGTGTGGGTAGCCAACAGAAATATACCTCTTGAGAATAACTCAAGAATTCTCAAACTCAATGAAAAAGGGCTTCTTGAGCTTCACAATGATAAAAACAGCACCATTTGGTCATCCAATATATCAAGCAAAGTAGAGAGTAATCCAATTGCTTCTCTTTTGGATTCAGGAAATTTTGTAGTGAAGTATGGGCAAGAAACTAATGAGGACAGCGTCTTGTGGCAGAGTTTTGATTATCTTGTCATACGATTGAAACTTGGGTGGAACTTAGAGACTGGTCTAGAAAGATTTTTAACATCTTGGAGAAGTGATGACGATCCTTCTGAGGGAGAATATACTCTCAAAATTGACCTTAGAGGATATCCTCAAATGATTAGATTCAAGGGACCTGATATAACATCGAGAGCAGGATCATGGAATGGCTATCCGGGTTCAACTAGTTCACAAAATTTTGTGATCAATGAAAAAGAGGTGTATTATGAGTTCGAGCTTCCAGATAGATCACAATTCGGCATATCTACATTGACCCCTTCAGGAACAGCGCTGATTATGTTTTGGACATCTGAAAAAAGCACCCGGGAAGTTGTCTTGTCAAATGCAGACAAAGATGAATGCGAGAGGTATGCCTTTTGTGGTGCAAATTCTATATGCATTTATGGTGCATATGCAAACCTAGATATTCGTGATGGAGGAAGTGGTTGTCTACTTTGGTTTAATAATCTAGTTGACTTGATGAATTTCTCTCAATTGGGACAAGACTTTTATATCCGACTCCCTAGTTCAGAATTAGAGAAAGGGTGGAATAGGCCTGCGTCAATGCTGTTTATTATAAGTTTGGTGACTGATCTTGCTCTGCTTCTTTTAGATCATGGTGGACACAGAAAAATCAATAAAAGGATAAAAATCATCGTTGGTGTGTCTATTTCTGGATTAATCATACTGTGTATAGGCATGTTGATAATTATTAATCCAGGGGCTACAAGAAAAATTTACAGCAAGCATTACAAAAATATGCTGAGGAAAGAAGATATTGATTTGCCAACTTTCAGTTTGTCAGTCATAGCAAATGCCACTGAAGACTTTTCAACCAAAAACAAGCTTGGAGAAGGTGACTATGGACCAGTATACAAGGGCACACTGAAAGATGGGAAAGTGTTAGCTGTGAAAAGGCTTTCTAAAAAGTCTGGACAAGGGTTGGAAGAGTTAAAAAATGAAGTGGCATTGATATCCAAACTTCAGCACCGTAATCTTGTAAAGCTTCTTGGATATTGCATCAAAGGAGAAGAAAAAATGTTGATTTATGAATACATGCCCAACCACAGCTTAAACTACTTTGTTTTTGGTTGGAGCCCCTGTGATTCATTCTACAAATCTATTATCACAATCTTCTTATTTCACATTTGTAATGAATCGCAAAGGATGTTGCTAGATTGGCAAAACTGTTTCAATATTATTAGCGGCATTGCTCGAGGATTTTTGTATCTTCATCAAGACTCTAGAGATCTAAAAATTAGCAATATTTTACTTGATGCAAATTTGGATCTCAAAATATCAGACTTTGACCTAGCTCGATCGTTTTTGGGAGATCAAGTCGAAGCCAACACAAATAGGGTGGCTGGAACATATGGCTACATGCCTCCATATGTGATAGTACTAGAGATTGTAAGTGGGAAGAAAAACACCGAATTTGCAAACCCAGAACACTACAATAATCTTCTTGAACATGCATGGAGATTATGGACGAAAGAGATGGCACTAAAACTATTAGATGAAGTATTAGTTGAACAGTGCACATCCAGTGAGGTCATACAATCCATACAGGTAGGCCTATTATGTGTGCAACAAAGACCGGAAGATAGGCCAGACATGGCATCAGTGGTATTAATGTTGAATGGTGAAAAATATTGCCAAAGCCAAAGCTGCCTGGGTTTTACACTGAAACAGATGTTGCATCTGAAGCAAATTGTTCATTGGGAAATCACAGACCGTGCTCAGTCAATGAACTTTCTATCACAATGTTAG 2262 0.3771 SLLVPNIMVHSIIVLCTWFLLFFDMLRTSTSLDSLKVSQSIQDDETLVSAGRITELDFFSPGNSTRRYLGIWFRNVSPITVVWVANRNIPLENNSRILKLNEKGLLELHNDKNSTIWSSNISSKVESNPIASLLDSGNFVVKYGQETNEDSVLWQSFDYLVIRLKLGWNLETGLERFLTSWRSDDDPSEGEYTLKIDLRGYPQMIRFKGPDITSRAGSWNGYPGSTSSQNFVINEKEVYYEFELPDRSQFGISTLTPSGTALIMFWTSEKSTREVVLSNADKDECERYAFCGANSICIYGAYANLDIRDGGSGCLLWFNNLVDLMNFSQLGQDFYIRLPSSELEKGWNRPASMLFIISLVTDLALLLLDHGGHRKINKRIKIIVGVSISGLIILCIGMLIIINPGATRKIYSKHYKNMLRKEDIDLPTFSLSVIANATEDFSTKNKLGEGDYGPVYKGTLKDGKVLAVKRLSKKSGQGLEELKNEVALISKLQHRNLVKLLGYCIKGEEKMLIYEYMPNHSLNYFVFGWSPCDSFYKSIITIFLFHICNESQRMLLDWQNCFNIISGIARGFLYLHQDSRDLKISNILLDANLDLKISDFDLARSFLGDQVEANTNRVAGTYGYMPPYVIVLEIVSGKKNTEFANPEHYNNLLEHAWRLWTKEMALKLLDEVLVEQCTSSEVIQSIQVGLLCVQQRPEDRPDMASVVLMLNGEKYCQSQSCLGFTLKQMLHLKQIVHWEITDRAQSMNFLSQC 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03862 753 Gene3D Transferase(Phosphotransferase) domain 1 544 629 - -
Pste1g03862 753 Gene3D Transferase(Phosphotransferase) domain 1 630 723 - -
Pste1g03862 753 Pfam D-mannose binding lectin 80 182 IPR001480 -
Pste1g03862 753 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 187 IPR036426 -
Pste1g03862 753 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 406 516 - -
Pste1g03862 753 PIRSF SRK 299 733 IPR024171 GO:0004674
Pste1g03862 753 PIRSF SRK 5 306 IPR024171 GO:0004674
Pste1g03862 753 ProSiteProfiles Bulb-type lectin domain profile. 32 154 IPR001480 -
Pste1g03862 753 Gene3D Phosphorylase Kinase; domain 1 404 516 - -
Pste1g03862 753 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 300 697 - -
Pste1g03862 753 CDD PAN_AP_plant 274 339 - -
Pste1g03862 753 FunFam Os07g0541700 protein 536 621 - -
Pste1g03862 753 Pfam S-locus glycoprotein domain 226 298 IPR000858 GO:0048544
Pste1g03862 753 SUPERFAMILY Protein kinase-like (PK-like) 429 710 IPR011009 -
Pste1g03862 753 SMART serkin_6 441 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03862 753 Pfam Protein kinase domain 442 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03862 753 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 157 - -
Pste1g03862 753 Pfam PAN-like domain 272 324 IPR003609 -
Pste1g03862 753 Gene3D - 28 157 IPR036426 -
Pste1g03862 753 SMART blect_4 38 160 IPR001480 -
Pste1g03862 753 CDD B_lectin 38 159 IPR001480 -
Pste1g03862 753 ProSiteProfiles Protein kinase domain profile. 441 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03862 Pste-Chr1 19537360 19545083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03862 429 711 Receptor kinase-like Gene Family AT4G11530 47.883 1.86e-85 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03862 Pkinase 1e-28 CL0016