Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03861 ATGACCATTGTTTTTGTTCTTCTTCCTGTTATCATCACAATAACAAGATTCCTTTTGTTAACTCAAATTTCCTACGCAACTGATACTCTTACCCAGCTTCAACCCCTTCATGATGGAGCAACCTTGATCTCAAACAATGGAACCTTTGAATTGGGTTTCTTCAGTCCAAGTAGTTCCACAAACCGCTACATAGGAATATGGTACAAAAACATCCCAGTCAGAACCGTGGTTTGGGTCGCCAACCGTGACAACCCGGTCCCAACCAACAGCACACTCACCATAAGAGACGGACACCTCGTCCTTCTCAACCAAAACGCCACCGTTCACTGGTCCACAAACACGACAACAAAAGAAGCCTCCAATGAAGTGGTCACAGCACAGCTCTTAGACTCAGGAAACTTAGTTCTAAGAAACAACCACAAGGACAACGATGATGATAGCATATTATGGCAGAGTTTCGATTACCCGTGTGACACGTTGTTACCGGGGATGAAACTCGGGTGGAACCTGAAGAAAAACCTTAACAGGGTTCTAAGGGCGTGGAAAGACAAAAATGACCCTTCAAGTGGGGACTTCACTTGGGGTTTCGTAAGAAGCAACAACCCCGAAATGGTTATGTGGAAGGGCTCAACGAAGCTCTACCGAGGTGGGCCCTGGAATGGGGTTCAATTCAGCGCTGCACCTTCTCTCAAGTATAACCCAATGTTTGATTTCAAGTTCGTGTATAACAACGATGAGTTGTATTACACCTACAGCCTCAAGAACAAGTCTTTGGTTTCAATACTTGTGATGAACCAAAGTAGCTACACACGTGACCGTTACTCGTGGGATGAGGAAGCTCGAAGTTGGAGGAGGAGTTCGTATACACCAAGGGATTATTGTGATAGTTACAATGTTTGTGGGCCATTTGGGTATTGTGCTATGGGTGAGTCCCCTGTGTGCCAGTGTTTGAATGGGTTTAGGCCCAAATTGAGTGAGGAATGGATTGGGATGGATTGGACAAAGGGGTGTGTGAGGAGCCACAGCTGGAGGTGCAAAGAGAAGAGTGAAGATGGTTTTGTTAAGTTTAGCAACATGAAGGTGCCAGACACGAGTGAATCGTGGGTTGATGGAAGTTTGACACGTGAGGAATGCAAAGCCAAATGCTGGGAAAATTGTTCTTGTATGGCTTTTGCAAACACTGATATAAGGGGAGAAGGGAGTGGGTGTGCAATTTGGTTTGGTAATCTATTGGATTTGAGAAGGATTCCTGATGCTGGACAAGACCTCTATGTTAGAATGGCAGCCCCTCAAATAGAAAACCAAGATGCAAAAAGTGATTCAAAGAAAAAGGTGGTTGTAATCACAAGCACAACTTCATCAATTATTGTGGTGCTTTTGATATTGATCTTCATTTATTGGAAGAGAAATATAAGAGGAATTATCTGTGCAAAACAAAAGAATCTTGAAAGCAATGAAGATGATTTGGACCTACCTTTGTTCGACCTTTCTTTATTAGTACGTGCTACTGATGACTTTTCAAGTGATAGGAAGCTTGGAGAAGGTGGTTTTGGGCCTGTATATAGGGGAACACTACCAGATGGACAAGAAATTGCTGTACTTTCAAGAAGATCAAGTCAGGGGTTAAAAGAATTTAAGAATGAAGTTATTTTATGTGCCAAACTTCAACACCGAAATCTTGTTAAAGTTCTTGGTTGTTGCATTTGGAAAGATGAGAAATTGCTCATATATGAATACATGCCTAACAAAAGTTTAGATTCCTTTATCTTTGATTCCATTCGAAGCAAGCTTTTAGATTGGTCTAAACGTTTTTACATTATAAGTGGCATTGCAAGAGGATTGCTTTATCTTCATCAAGACTCAAGATTAAGGATCATACATAGAGATCTTAAAGCTAGCAATATTTTATTAGACAATGAAATGAATCCAAAAATTTCTGATTTTGGTTTGGCTCGAATGTTCGGAGGTGATCAAATTGAAGGAAACACAAGCAAAATAGTTGGTACATACGGTTATATGGCACCTGAATATGCCTTTGATGGGTTGTTCTCTACTAAATCAGATGTATTTAGTTTTGGCATTTTATTACTAGAGATAATAAGTGGCAAGAAAAACAAAGGGCTTTCCTATTCAAATGACAATCATAATCTTATTCGATATGCATGGAGAATATGGAAAGAAGGCATCCCAATGAAGTTTATTGATGCTTGTTTAAAGGGCATGTGTAATGAATCAGAAGTTATTCGTTGCATTCATATCGGACTTTTGTGTGTACAACATGATTTAGATGATAGACCAAATATGCCAACAGTAGTTGTGATGCTAAACAGTGAGAACGCTTTGCCTCTGCCAAAGGAGCCTAATTTCATCATAGAAAAGAGCTCAACAAAAGGAGAATCCTCTTCTGAGAGGCAAATAACTTCATCAACAAATGAACTAACTATCTCAACGTTGGATCCTAGATAA 2466 0.4023 MTIVFVLLPVIITITRFLLLTQISYATDTLTQLQPLHDGATLISNNGTFELGFFSPSSSTNRYIGIWYKNIPVRTVVWVANRDNPVPTNSTLTIRDGHLVLLNQNATVHWSTNTTTKEASNEVVTAQLLDSGNLVLRNNHKDNDDDSILWQSFDYPCDTLLPGMKLGWNLKKNLNRVLRAWKDKNDPSSGDFTWGFVRSNNPEMVMWKGSTKLYRGGPWNGVQFSAAPSLKYNPMFDFKFVYNNDELYYTYSLKNKSLVSILVMNQSSYTRDRYSWDEEARSWRRSSYTPRDYCDSYNVCGPFGYCAMGESPVCQCLNGFRPKLSEEWIGMDWTKGCVRSHSWRCKEKSEDGFVKFSNMKVPDTSESWVDGSLTREECKAKCWENCSCMAFANTDIRGEGSGCAIWFGNLLDLRRIPDAGQDLYVRMAAPQIENQDAKSDSKKKVVVITSTTSSIIVVLLILIFIYWKRNIRGIICAKQKNLESNEDDLDLPLFDLSLLVRATDDFSSDRKLGEGGFGPVYRGTLPDGQEIAVLSRRSSQGLKEFKNEVILCAKLQHRNLVKVLGCCIWKDEKLLIYEYMPNKSLDSFIFDSIRSKLLDWSKRFYIISGIARGLLYLHQDSRLRIIHRDLKASNILLDNEMNPKISDFGLARMFGGDQIEGNTSKIVGTYGYMAPEYAFDGLFSTKSDVFSFGILLLEIISGKKNKGLSYSNDNHNLIRYAWRIWKEGIPMKFIDACLKGMCNESEVIRCIHIGLLCVQHDLDDRPNMPTVVVMLNSENALPLPKEPNFIIEKSSTKGESSSERQITSSTNELTISTLDPR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03861 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 472 579 - -
Pste1g03861 821 Gene3D Transferase(Phosphotransferase) domain 1 580 783 - -
Pste1g03861 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 580 782 - -
Pste1g03861 821 ProSiteProfiles PAN/Apple domain profile. 345 428 IPR003609 -
Pste1g03861 821 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 766 - -
Pste1g03861 821 ProSiteProfiles Protein kinase domain profile. 506 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03861 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 153 - -
Pste1g03861 821 Pfam Domain of unknown function (DUF3403) 778 821 IPR021820 GO:0004674
Pste1g03861 821 MobiDBLite consensus disorder prediction 793 821 - -
Pste1g03861 821 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
Pste1g03861 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 187 IPR036426 -
Pste1g03861 821 Pfam Protein tyrosine and serine/threonine kinase 508 772 IPR001245 GO:0004672|GO:0006468
Pste1g03861 821 SMART serkin_6 506 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03861 821 Gene3D Phosphorylase Kinase; domain 1 472 579 - -
Pste1g03861 821 Pfam PAN-like domain 345 413 IPR003609 -
Pste1g03861 821 ProSiteProfiles EGF-like domain profile. 290 326 IPR000742 -
Pste1g03861 821 Gene3D - 21 153 IPR036426 -
Pste1g03861 821 PIRSF SRK 1 821 IPR024171 GO:0004674
Pste1g03861 821 CDD STKc_IRAK 512 776 - -
Pste1g03861 821 Pfam D-mannose binding lectin 75 182 IPR001480 -
Pste1g03861 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Pste1g03861 821 CDD PAN_AP_plant 346 428 - -
Pste1g03861 821 SUPERFAMILY Protein kinase-like (PK-like) 490 790 IPR011009 -
Pste1g03861 821 CDD B_lectin 34 156 IPR001480 -
Pste1g03861 821 SMART ntp_6 348 427 IPR003609 -
Pste1g03861 821 ProSiteProfiles Bulb-type lectin domain profile. 27 149 IPR001480 -
Pste1g03861 821 SMART blect_4 33 156 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03861 Pste-Chr1 19515873 19527097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03861 485 821 Receptor kinase-like Gene Family AT4G23150 52.299 3.00e-122 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03861 PK_Tyr_Ser-Thr 4.1e-43 CL0016