Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03859 AACTCAGTTTACGCGTTTGGCCAATACACACTTCAATCTTCAATGCTTATAGTTAACTCTGTATCACTGAGGAGAAAAATGGCCATTCTGACTATTCTCCTCTTTGTCACAAAGCTATCTGTTTTCTTCTCTAAATTTTCAGCTGCAACAGATACCATTACCCAGTTTGAGCCCCTTGAAGATAACACAACATTGGTTTCAAAAGATGGAACCTTTGAGTTGGGTTTGTTCACCCCAGGTAGCAACTCCCCAAACCGTTATTTAGGAATCTGGTACAAAAACATACCCATTAAAACAGTAGTTTGGGTTGCCAACCGTGACACTCCAATCAGAGACAACTCCACCAAGTTGAGCATAAACACAGAAGGCAACAACCTGGTACTTGTGAACCAGAACAACACAGTTATTTGGTCAACAAATGCAAAAACAGAAGGGGTTGTCGTGGTTGCACAGTTGTTGGACTCAGGAAACTTGGTTTTAAGAGATGAGAAAGACACCAATCCTGAAAACTTTTTGTGGCAGAGCTTTGACTACCCCTCAGACACGTTTCTACCAGGAATGAAAATGGGGTGGGACTTCAAGAGAGGCCTTAGTTGGAACCTAACAGCGTGGAAGAACTGGGATGACCCTTCTCCAGGGGACTTTGTAGGAACAGTCTTGCTCACCAATAACCCTGAAGAGGTTCTTTTCAAAGGCTCAACAGAATACTACAGAAGTGGGCCATCACAAGGCCCAAAATTCAGTGGCAACCCCTCTACCTCAAACTCAGTAGCAAATTACACATTAGTGTCAAATAATGATGGGTATTACATCACATATAGCATCACTGATAAGTCAGTGATTTCAAGAATTTTGTTGAACCAAACACTTTATCTTCGCCAGCGCTTGACATGGAATAAGGATAGTCAAAGCTGGAGGGTGTCTTCCCAGTTGCCAAGTGACTTATGCGATGTGTACAACACTTGTGGCGCGTTTGGGGTTTGTGACATTAATCTGGCACCTGTGTGCAATTGTTTAGATGGGTTCAAGCCAAAAGTGCCGCAGAATTGGAGCCAGATGAATTGGAATGAAGGGTGTGTGCACAACCAAACTTGGAGGTGCAGGGGAAAGGGCAGGGATGGTTTTATGAAGTTCAGTAATGTGAAGGCACCAGATACTAAAAGATCGTGGCTTAATACAAGTATGACACTTGATGAGTGCAAGAACAAATGTTGGGAAAATTGTTCTTGTATGGCTTATGCAAATTCAGACATTAGAGGAGAAGGTAGTGGCTGTGCCCTTTGGTTTGGTGATCTGTTAGATATAAGACTCATTCCAAATGCTGGACAAGATTTGTATGTTAGAGTGGCAGTTTCTATCACAGCTCAACAAATTCTAGATGAAAAGGATAGTTCAAAGAAGAAGGTAGTTGTGATTGCTAGTACGATTTCCTCTTTTACTGCTATGCTACTAATTTTCATGATCATTTACTGGAGTAACAGAAGTAGAATCAAAGGGATCAAAGAAAAGAAAAATCAAAGTCAAGAAGAATTTGACCTCCCTTTATTTGACCTTTCCTCCATAACTCATGCTACAAATCACTTCTCAAATCATAATAAGCTTGGTGAAGGTGGTTTTGGACCCGTATATAAGGGAACATTACCAGATGGACAGGAGATAGCTGTTAAGAGACTTTCACAAACATCTGGACAAGGAATAAAAGAGTTTAAAAATGAGGTTATATTATGTGCCAAACTGCAACACCGGAATCTCGTTAAAGTACTTGGATGTTGCATTCAAGAAGATGAGAAATTACTTATATATGAATATATGGCCAACAAAAGCTTAGACGTCTTTCTTTTCGATTCTAGTCAAAGTAAACATCTCAATTGGCCAAAGCGTTTTTGCATTATAAATGGAATTGCTCGGGGACTACTTTATCTTCATCAAGACTCAAGACTAAGGATCATACATAGAGATCTTAAGGCAAGTAATATTTTATTAGATGATGAAATGAATCCAAAAATTTCAGACTTTGGCTTGGCTCGAATGTGTGGAGGCGATCAAATTGAAGGGAAAACAAATAGAGTAGTTGGTACATATGGTTATATGGCACCTGAATATGCCTTTGATGGAATATTTTCCATTAAATCAGATGTGTTTAGCTTCGGTGTATTATTGCTAGAGATAGTGAGTGGCAAGAAAAATAGTAGACTCTTTTATCCAAACGACGATAATAATCTTATTGGGCATGCATGGAAGTTGTGGAAAGAGGGAAATCCAATGCAATTAATTGACGAAAGCTTGGATGACTCATGTATTCAACATGAGGCATTACGTTGCATTCATATTGCTCTTTTATGTTTGCAACATCATCCAAATGATAGGCCAAACATGACATCTGTGGTTGTATTGTTGAGTAATGAGAATGCATTGCCTCTACCAAAGGATCCTACCTACTTAATAAAGGACTTCTCAACTGAGAGAGAATCTTCTTCGGAGAACTTTACTTCTAATTCTATTAATGATCTCACTATATCAATATTGTCTGAAAGATAGAGAAAATTAGTTTACTTCTTACCAATTATTAGCTTATTAACTTTGTGTATGAGATAACATATGATTTTTATAATCATGCTTCTTATTTGTTTGAACTGTGTTATTGTCTGTAGAACTTTTGCTAATGTTACTCTAGAC 2676 0.3853 NSVYAFGQYTLQSSMLIVNSVSLRRKMAILTILLFVTKLSVFFSKFSAATDTITQFEPLEDNTTLVSKDGTFELGLFTPGSNSPNRYLGIWYKNIPIKTVVWVANRDTPIRDNSTKLSINTEGNNLVLVNQNNTVIWSTNAKTEGVVVVAQLLDSGNLVLRDEKDTNPENFLWQSFDYPSDTFLPGMKMGWDFKRGLSWNLTAWKNWDDPSPGDFVGTVLLTNNPEEVLFKGSTEYYRSGPSQGPKFSGNPSTSNSVANYTLVSNNDGYYITYSITDKSVISRILLNQTLYLRQRLTWNKDSQSWRVSSQLPSDLCDVYNTCGAFGVCDINLAPVCNCLDGFKPKVPQNWSQMNWNEGCVHNQTWRCRGKGRDGFMKFSNVKAPDTKRSWLNTSMTLDECKNKCWENCSCMAYANSDIRGEGSGCALWFGDLLDIRLIPNAGQDLYVRVAVSITAQQILDEKDSSKKKVVVIASTISSFTAMLLIFMIIYWSNRSRIKGIKEKKNQSQEEFDLPLFDLSSITHATNHFSNHNKLGEGGFGPVYKGTLPDGQEIAVKRLSQTSGQGIKEFKNEVILCAKLQHRNLVKVLGCCIQEDEKLLIYEYMANKSLDVFLFDSSQSKHLNWPKRFCIINGIARGLLYLHQDSRLRIIHRDLKASNILLDDEMNPKISDFGLARMCGGDQIEGKTNRVVGTYGYMAPEYAFDGIFSIKSDVFSFGVLLLEIVSGKKNSRLFYPNDDNNLIGHAWKLWKEGNPMQLIDESLDDSCIQHEALRCIHIALLCLQHHPNDRPNMTSVVVLLSNENALPLPKDPTYLIKDFSTERESSSENFTSNSINDLTISILSER 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03859 845 Gene3D Phosphorylase Kinase; domain 1 491 603 - -
Pste1g03859 845 Pfam D-mannose binding lectin 99 205 IPR001480 -
Pste1g03859 845 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 33 790 - -
Pste1g03859 845 CDD B_lectin 57 179 IPR001480 -
Pste1g03859 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
Pste1g03859 845 Gene3D Transferase(Phosphotransferase) domain 1 604 806 - -
Pste1g03859 845 SUPERFAMILY alpha-D-mannose-specific plant lectins 100 210 IPR036426 -
Pste1g03859 845 SUPERFAMILY Protein kinase-like (PK-like) 511 816 IPR011009 -
Pste1g03859 845 SMART blect_4 56 179 IPR001480 -
Pste1g03859 845 Pfam S-locus glycoprotein domain 237 345 IPR000858 GO:0048544
Pste1g03859 845 Gene3D - 44 176 IPR036426 -
Pste1g03859 845 CDD STKc_IRAK 534 796 - -
Pste1g03859 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 46 176 - -
Pste1g03859 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 604 806 - -
Pste1g03859 845 ProSiteProfiles Protein kinase domain profile. 528 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03859 845 SMART ntp_6 370 449 IPR003609 -
Pste1g03859 845 Pfam PAN-like domain 367 435 IPR003609 -
Pste1g03859 845 SMART serkin_6 528 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03859 845 ProSiteProfiles PAN/Apple domain profile. 367 450 IPR003609 -
Pste1g03859 845 CDD PAN_AP_plant 367 450 - -
Pste1g03859 845 ProSiteProfiles Bulb-type lectin domain profile. 50 173 IPR001480 -
Pste1g03859 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 492 603 - -
Pste1g03859 845 Pfam Protein tyrosine and serine/threonine kinase 531 797 IPR001245 GO:0004672|GO:0006468
Pste1g03859 845 PIRSF SRK 22 845 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03859 Pste-Chr1 19491170 19494736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03859 470 814 Receptor kinase-like Gene Family AT4G23190 51.420 3.60e-124 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03859 PK_Tyr_Ser-Thr 1.5e-49 CL0016