Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03858 GCAAAAGATATCATTAACCAGTTTGAGTTACTTGAAGATAACAGCACCTTGGTTTCAAACGATGGAACCTTTGAGTTGGGTTTCTTCACCCCAGGTAGTAACTCCCCTAACCGCTATCTAGGGATCTGGTTCAAAAACATACCCATTAGAACAGTAGTTTGGGTTGCCAACCGTAACACTCCAATCAACGGCAACTCCACCAAGTTGAGCATAAACACACACGGCAACATGGTACTTGTGAACCACAACAACATTATTTGGTCCACAAACACAACAGCAACAGGGTTCCTTGTCGCAGCACAACTCTTAGACTCAGGAAACTTGGTTCTAAGAGATGAGAAAGATACCAATCCTGAAAACTATTTGTGGCAGAGCTTTGACTATCCCTCAGACACGCTTCTATCTGGAATGAGAATAGGATGGGACTTGAAGAAAGGCCTTAATTGGAGCCTAACAGCATGGAAAAACTGGGATGACCCTTCTCCAGGGGACTTTACAGCAACTATTTTCCGTACCAATAATCCTGAAGATGTTATGTGGAAGGGTACAACATTGTACTACAGAAGTGGTCCTTCATTGGATGGTGCTATATTCAGTGGAAGCCCTTCTTCCAGCGCAGGTGAAAACTACAAAATTGTGTCCAACAAACATCAATTTTACGTTACATATAGCATGGATGATAAGTATTTGAATGCAAGAATTGTGTTAAATCAAACACAATATCTTCGCCAGCGCCTGACATGGAATAGAGATAGTCAAAGTTGGAGGCTTTCTACGCAGGCACCAAGTGATTTATGTGACTACTATAACACTTGTGGCCCATTTGGGATTTGTGACGTTGGTCAGACACCAGTGTGCAAATGTTTAGATGGGTTCAAGCCAAAATCACCTCAAAATTGGAGCCAAATGAATTGGAATGAAGGGTGTGTGCACAACCAAACTTGGAGCTGCAGGAAAAAGGACAAGGATGCTTTTCAGAAGTTCAGTAAGGTGAAGGCACCAGAGACTACAAAGTCTTGGGTTAATGCAAGTATGACACTTGATGAATGCAAAAACAAGTGTTGGGAAAATTGTTCTTGTATGGCTTATGCAAATTCAGACATGAGGGGAGATGGTAGTGGCTGTGCCCTTTGGTTTGATGATTTGTTGGATATAAGATTGATGCCAAATGCTGGACAGGATCTGTATATTAGATTGGCAGTGTCTGAAACAGCTCAAAAGAATCAAGATGAAAAAGATAATTCGAGGAAAAAAAAAGTGGTTGTGATTGCAAGTACTGTTTCCGCTGTAGTAATTTTCACATTCATTTGTTGGATCAGCAAAACAAAAATCAGAGAGATCATCATCATGATCAAAAGTAAGAAAAATAGTGACAACCAACAAGAAGACTTTGAATTGCCATTGTTTGACCTTTCCTCAATAGCACATGCTACAAATCACTTCTCAGTTCACAACAAGCTAGGGGAAGGTGGTTTTGGACCTGTATACAAGGGAACACTATCAAATGGAAAAGAGATTGCTGCTAAAAGGCTTTCACAAACATCTTCACAAGGATTAAAAGAATTTAAGAATGAGGTTATGTTATGCGCTGAACTTCAACATAGAAATCTCGTTAAAGTTATTGGATGTTGCATTCAAGAAGATGAAAAATTACTCATATATGAATATATGGCCAACAAAAGCTTAAACTTCTTCCTTTTTGAAGGAAATCCAATGCAATTCATCGATACTTGTTTAGAGGACTCCTGCATTTTATATGAGGCCTTGCGTTGTATTCATATTGGTCTTTTATGCGTGCAACACCATCCAAACGATAGGCCAAATATGACATCTGTCGTTGCATTGTTGAGAAATGAGATCGCATTACCTCTACCAAAGAATCCTAGTTACTTAATAAAAAACATCTCTGCAGATAGAGAATCTTCTTCCAAGAACTTTTCGTTGCCTTCTGTTAATGATGTCACCATCTCAATGTTGAATGTTGCTACAGACACCATTACTCAGTTTGAATCCCTTGAAGATAACACAACCTTGGTTTCAAAAAATGGAACCTTTGAGTTGGGTTTCTTCACCCCAAGTAGTAGTTCCTCAAACCGCTATATAGGAATCTGGTACAAAAACATACCTATCAGAACTGTAGTTTGGGTTGCCAACCGTGAGATTCCAATCAAAGACAACTCCACCAAGTTAAGCATAAACACACAAGGCAACATGGAACTTGTGAACCAGAACAACACAGTTATTTGGTCAACAAACACAACAACAAAAGGGATTGTTGTGGTCGCACAGCTGTTAGACTCAGGAAACTTGGTTCTAAGAGAAGAGAAAGACACAAATCCTGAAAACTACTTGTGGCAGAGCTTTGACTATCCCTCAGACACGTTTCTTGCTGGAATGAAAATAGGATGGAACTTGAAGAAAGGCCTCAATTGGAGCTATACTGCATGGAAAAACTGGGATGACCCTTCTCCAGGGGACTTAACAATCACTATGTCACGATCCAATAATCCTGAACAAGTTATGTGGAAAGGCTCAAGAAAGTACTACAGAACTGGCCCATGGGATGGAACTAAATTCAGTGGTGCCCCCTCTGTCTCATCCAACTCTTTAATAACCTACACGACTGTGTCTCAAAACGATGAATTTTCCGCTACATATAGCAGGAATGACAAGTCAGTGATTTCAATAATTGTGATTAATCAAACACTTTCTGTTCGTCAGCACTTGATATGGAATAATGATAGTGAAAGTTGGAGGCTGTCTACAGAGTTTCCAAGTGATGTATGCGATGAGTATAACACTTGTGAAGCATTTGGGATTTGTGACGGTAGTGAGGCACCTTTGTGCAAGTGCATAGATGGGTTCAAGCCAAAATCACCTCAAAATTGGAGCCAAATGAATTGGAATGATGGGTGTGTGCACAACCAAACTTGGAGCTGCAGGGAAAAGGACAAGGATAGTTTTCACAAATTCAGTAATGTGAAGGCACCAGAGACTACAAGGTCTTGGGTTAATGCAAGTATGACACTTGATGAGTGCAAAAACAAGTGTTGGGAAGATTGTTCTTGTATGGCTTATGCAAATTCAGACATCAGAGAAGGCAGTGGATGTGCCCTTTGGTTTGGTGAATTGTTAGATATAATACTGCTTCCAAATGCAGGACAAGATCTGTATATTAGGTTGGCAGTGGCTGAAACAGTTCAAGGACATCAAGATGGAAAAGAAAATTTGAAGACAAAAGTGGTTGTGATTGCAAGCGTTGTTTCAGCTGTATTAATTTTCATATTCACGATCATTTGCTGGAGAAGCAAAGAAAAAATCAAAGAGATCATCATCATGATGAAAGGTAAAAATAACGAAAACAAAAAAGAAGACTTTGAGATACCTTTGTTTGACCTTGCCTCAATAGCACATGCTACAAATCACTTCTCAAATGACAACAAGCTAGGCGAAGGTGGTTTTGGACCTGTATACAAAGGAACTCTATCAAATGGACAAGAAGTTGCTGTTAAAAGGCTTTCACAAACATCTGGGCAAGGACTAAAGGAATTCAAGAATGAGGTTATACTATGTGCTGAACTTCAACATCGAAATCTTGTTAAAGTTCTTGGATGTTGCATTCAAGAAGATGAGAAATTACTCATATATGAATATATGGCGAATAAAAGCTTAGACTTCTTTCTTTTCGATATTGATCGAAGTAAACTTCTTGACTGGCCTATGCGTTTTTGCATTATAAATGGAATTGCTCGAGGACTGCTTTATCTTCATCAAGACTCAAGACTAAGAATCATACATAGAGATCTTAAGGCGAGTAATGTTTTATTAGATGATGAAATGAATCCAAAAATTTCTGATTTTGGTTTGGCTCGAATGTGTGGAGGTGATCAAATAGAAGGAAAAACAAGGAGAGTAGTTGAATATGCTTTTGATGGAATATTTTCCATCAAATCAGATGTGTTTAGCTTTGGCATATTGTTACTAGAGATAGTGAGTGGCAAGAAAAATAGCAAAGTCTACAATCCAAACGACTACAATAATCTTGTTGGGCATGCATGGAGGTTGTGGAAAGAAGGAAATCTGGTGCAATTCATTGACACTAGTTTGAAGAATTCGTGTATTCTGATTGAGGCATTGCGTTGTATGCATATTGGTCTTTTATGTGTGGAACATCATCCTAATGAGAGGCCAAATATGACATCTGTGGTTATGTTGTTAAGCAACGAAAATTTGTTGCCTCTACCAAAGAATCCTAGCTACTTACTTAAAGACATCCCATCTGAAGCAGAATCTTCTTCTGACAACTTTAAATTATTTTCTACTAATGATGTCACAATTTCAACATTGATTGGTAGATAGGCAAAATTATTTTACTTCTTACCTACACAATAGCTTTCTTATTTTTCTAATGTAGTCATGTTTATTAGTTGTTTTGATATATGTTTTTTCTATATGGAACTTTTGCTAATATTATTCTAACAATTGATGCAAAAGAATATTTATACAATCCTTAAATAAAAGAATATATAGTATTTAAGGAGCCATATATAACCATGCTAAGCACGAATCAAAT 4573 0.3809 AKDIINQFELLEDNSTLVSNDGTFELGFFTPGSNSPNRYLGIWFKNIPIRTVVWVANRNTPINGNSTKLSINTHGNMVLVNHNNIIWSTNTTATGFLVAAQLLDSGNLVLRDEKDTNPENYLWQSFDYPSDTLLSGMRIGWDLKKGLNWSLTAWKNWDDPSPGDFTATIFRTNNPEDVMWKGTTLYYRSGPSLDGAIFSGSPSSSAGENYKIVSNKHQFYVTYSMDDKYLNARIVLNQTQYLRQRLTWNRDSQSWRLSTQAPSDLCDYYNTCGPFGICDVGQTPVCKCLDGFKPKSPQNWSQMNWNEGCVHNQTWSCRKKDKDAFQKFSKVKAPETTKSWVNASMTLDECKNKCWENCSCMAYANSDMRGDGSGCALWFDDLLDIRLMPNAGQDLYIRLAVSETAQKNQDEKDNSRKKKVVVIASTVSAVVIFTFICWISKTKIREIIIMIKSKKNSDNQQEDFELPLFDLSSIAHATNHFSVHNKLGEGGFGPVYKGTLSNGKEIAAKRLSQTSSQGLKEFKNEVMLCAELQHRNLVKVIGCCIQEDEKLLIYEYMANKSLNFFLFEGNPMQFIDTCLEDSCILYEALRCIHIGLLCVQHHPNDRPNMTSVVALLRNEIALPLPKNPSYLIKNISADRESSSKNFSLPSVNDVTISMLNVATDTITQFESLEDNTTLVSKNGTFELGFFTPSSSSSNRYIGIWYKNIPIRTVVWVANREIPIKDNSTKLSINTQGNMELVNQNNTVIWSTNTTTKGIVVVAQLLDSGNLVLREEKDTNPENYLWQSFDYPSDTFLAGMKIGWNLKKGLNWSYTAWKNWDDPSPGDLTITMSRSNNPEQVMWKGSRKYYRTGPWDGTKFSGAPSVSSNSLITYTTVSQNDEFSATYSRNDKSVISIIVINQTLSVRQHLIWNNDSESWRLSTEFPSDVCDEYNTCEAFGICDGSEAPLCKCIDGFKPKSPQNWSQMNWNDGCVHNQTWSCREKDKDSFHKFSNVKAPETTRSWVNASMTLDECKNKCWEDCSCMAYANSDIREGSGCALWFGELLDIILLPNAGQDLYIRLAVAETVQGHQDGKENLKTKVVVIASVVSAVLIFIFTIICWRSKEKIKEIIIMMKGKNNENKKEDFEIPLFDLASIAHATNHFSNDNKLGEGGFGPVYKGTLSNGQEVAVKRLSQTSGQGLKEFKNEVILCAELQHRNLVKVLGCCIQEDEKLLIYEYMANKSLDFFLFDIDRSKLLDWPMRFCIINGIARGLLYLHQDSRLRIIHRDLKASNVLLDDEMNPKISDFGLARMCGGDQIEGKTRRVVEYAFDGIFSIKSDVFSFGILLLEIVSGKKNSKVYNPNDYNNLVGHAWRLWKEGNLVQFIDTSLKNSCILIEALRCMHIGLLCVEHHPNERPNMTSVVMLLSNENLLPLPKNPSYLLKDIPSEAESSSDNFKLFSTNDVTISTLIGR 1452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03858 1452 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 126 - -
Pste1g03858 1452 SUPERFAMILY Protein kinase-like (PK-like) 1125 1421 IPR011009 -
Pste1g03858 1452 ProSiteProfiles Bulb-type lectin domain profile. 663 785 IPR001480 -
Pste1g03858 1452 CDD PAN_AP_plant 316 400 - -
Pste1g03858 1452 FunFam Os04g0303100 protein 703 848 - -
Pste1g03858 1452 CDD B_lectin 670 791 IPR001480 -
Pste1g03858 1452 ProSiteProfiles Bulb-type lectin domain profile. 2 123 IPR001480 -
Pste1g03858 1452 Pfam Protein tyrosine and serine/threonine kinase 483 568 IPR001245 GO:0004672|GO:0006468
Pste1g03858 1452 Pfam Protein tyrosine and serine/threonine kinase 1146 1404 IPR001245 GO:0004672|GO:0006468
Pste1g03858 1452 SUPERFAMILY alpha-D-mannose-specific plant lectins 713 822 IPR036426 -
Pste1g03858 1452 ProSiteProfiles Protein kinase domain profile. 1143 1411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03858 1452 Gene3D - 1 126 IPR036426 -
Pste1g03858 1452 Gene3D - 656 788 IPR036426 -
Pste1g03858 1452 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 660 1397 - -
Pste1g03858 1452 ProSiteProfiles Protein kinase domain profile. 481 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03858 1452 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1219 1413 - -
Pste1g03858 1452 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1108 1218 - -
Pste1g03858 1452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1264 1276 IPR008271 GO:0004672|GO:0006468
Pste1g03858 1452 FunFam Os04g0303100 protein 42 186 - -
Pste1g03858 1452 ProSiteProfiles PAN/Apple domain profile. 980 1062 IPR003609 -
Pste1g03858 1452 SMART ntp_6 320 399 IPR003609 -
Pste1g03858 1452 SMART ntp_6 983 1061 IPR003609 -
Pste1g03858 1452 ProSiteProfiles EGF-like domain profile. 262 298 IPR000742 -
Pste1g03858 1452 SUPERFAMILY Protein kinase-like (PK-like) 460 575 IPR011009 -
Pste1g03858 1452 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 446 556 - -
Pste1g03858 1452 Pfam D-mannose binding lectin 51 155 IPR001480 -
Pste1g03858 1452 Pfam D-mannose binding lectin 712 817 IPR001480 -
Pste1g03858 1452 CDD B_lectin 9 129 IPR001480 -
Pste1g03858 1452 Gene3D Phosphorylase Kinase; domain 1 443 556 - -
Pste1g03858 1452 Gene3D Phosphorylase Kinase; domain 1 1105 1218 - -
Pste1g03858 1452 SUPERFAMILY alpha-D-mannose-specific plant lectins 52 160 IPR036426 -
Pste1g03858 1452 Gene3D Transferase(Phosphotransferase) domain 1 1219 1412 - -
Pste1g03858 1452 SMART serkin_6 1143 1412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03858 1452 Pfam PAN-like domain 317 385 IPR003609 -
Pste1g03858 1452 Pfam PAN-like domain 980 1047 IPR003609 -
Pste1g03858 1452 CDD PAN_AP_plant 979 1062 - -
Pste1g03858 1452 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 659 788 - -
Pste1g03858 1452 SMART blect_4 8 129 IPR001480 -
Pste1g03858 1452 SMART blect_4 669 791 IPR001480 -
Pste1g03858 1452 ProSiteProfiles PAN/Apple domain profile. 317 400 IPR003609 -
Pste1g03858 1452 Pfam S-locus glycoprotein domain 849 959 IPR000858 GO:0048544
Pste1g03858 1452 Pfam S-locus glycoprotein domain 187 296 IPR000858 GO:0048544
Pste1g03858 1452 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 316 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03858 Pste-Chr1 19455464 19465088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03858 569 660 Receptor kinase-like Gene Family AT4G23150 34.343 2.21e-12 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03858 PK_Tyr_Ser-Thr 8.2e-42 CL0016