Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03857 ATGGCCAGTCTTAGAATTCTTCTTCTTATTAGCAAGCTATTTTTTATATTCTCTAAATTTTCAGCTGCAACAGATACCATCACCCAGTTTGAGCCCCTTGAAGATAACACAACATTGGTTTCAAAAGATGGAACCTTTGAGTTGGGTTTGTTCACTCCAGGTAGCAACTCCCCAAACCGTTATTTAGGAATCTGGTACAAAAACATACCCATCAGAACAGTAGTTTGGGTTGCCAACCGCAACACCCCAATCAAAGACAACTCCACCAAGTTGAGCATAGACAAAGGTAACAACCTCGTACTTCTCAGCCGTAACAACACAGTTATTTGGTCAACAAATGCAAAAACAGAAGGGGTTATTGTAGTGGCACAGCTATTGGACTCAGGAAACTTGGTTCTCAGAGAAGAGAAAGACACCAATCCCGAGAACTATTTGTGGCAAAGTTTTGATTATCCCTCAGACACGTATCTACCTGAAATGATAATAGGATGGGACTTAAAGAAAGGGCTTAATAGGAACCTAACAGCATGGAAAAACTGGGATGACCCTTCTCCAGGGGACTTTGTAGCGATTATGTCACACAGCAATTATCCTGAAGATGTTATGTTAAAGGGTTCAACAAAGTTCTATCGAAGTGGCCCATGGGATGGAACTAAATTCAGTGCCATTCCCTCAGTGACATCAAGTTCTTTAGTAAACTACACCATTGTGTCCACAAAGGATGAGTTTTCCACTACATATAGCATGAAAGATAAGTCAGTGATTTCAAGAATTACGATGAATCAAACACTTTATGTTCGTCAGCGTTTGACATGGAATAAAGATAGTAAAACGTGGACGGTGTCTTCACAGCTCCCAGGTGATATGTGCGATTTATACAACACTTGTGGTGCATTTGGGATTTGTGATTCTAGTGAGGCACCCATGTGCAAGTGTTTAGATGGGTTCAAGCCAAAATCACCTGAAAATTGGTCCCAGATGAATTGGAATGAAGGGTGTGTGCACAACCAAACTTGGAGGTGCATGGATAAGAGCAGGGATGGTTTTCATAAATTTAGTAGGGTGAAGGCACCAGATACTACAAGGACTTGGGTTAATGCAAGTATGACACTTGATGAGTGCAAAAACAAGTGTTGGGAAAATTGTTCTTGTATGGCTTATGCAAATTCAGATATGAAGGGAAATGGTAGTGGATGTGCCATTTGGTTTGGTGATTTGTTAGATATAAAACTGATTTCAAATGCTGGACAAGATCTGTATATCAGATTGGCTGTCTCTGAAACAGGTTTGAGCTTCTATTTTGATTTTGGCTCTGTTTCAATAATTTTTTATTGGAAAAAGTTATATCAAGAAAATCAAGATGAAAAACATAAGTTAAAGAAAAAGGTTGTTGTGACTGCAAGCACCATTTCCTCGGTTATTGTGATGCTGTTGATTCTCATATTTGTTTATTGTAGCAACAAAGCGAAAATTGAAGAGATTATTACCAAGATCAAAGGAAACAATAATGAAAGTGAACAAGTCTTTGAAGTACCTTTGTTTGATCTTGCCTCAATAATACATGCAACAAATCACTTTTCAAAATACAATATGCTTGGTGAAGGTGGTTTTGGACCTGTATACAAGGGAACACTCGTAGATGGACAAGTGATTGCTATTAAAAGGCTTTCAGAAACATCTGGACAAGGATTAAAGGAATTTAAGAATGAGGTTAAGTTATGTGCTGAACTTCAACATCGAAATCTTGTTAAAGTTCTTGGATGTTGCATTCAAGAAGATGAAAAATTGCTTGTATATGAATATATGGCAAACAAAAGTCTAGACTTCTTTCTATTTGACTCTAATAGAAGCAAACTTCTCGATTGGCCCAAGCGCTTTTGCATTATAAATGGAATTGCTCGAGGAATACTTTATCTTCATCAAGACTCAAGACTAAGGATCATACACAGAGATCTTAAGGCAAGTAATATTTTATTAGATAATGAAATGAATCCAAAAATTTCTGATTTTGGTTTGGCTCGAATGTGTGGAGGTGATCAAATTGGAGGGAAAACAAACAAAGTAGTTGGTACATACGGTTACATGGCACCTGAATATGCTTTTAGTGGAATTTTTTCCATCAAATCAGACGTGTTTAGCTTTGGAGTATTAATGCTAGAAATTGCATGGAGGTTATGGAATGAGGGAAATCCAATGGAACTCATTGAGCCGAGTTTGAAGGACTCATGTGTTTTATATGAGGCATTACGGTGTATTCATATTGGTCTTTTATGTGTGCAACATCATCCTAATGATCGACCAAACATGTCATCTGTGGTCTTATTGTTAAGTAATGAGAATGCATTGCCTATACCAAAGGATCCTAGTTATTTAGTCAAGGACACCTCAATTGAAAATGAATCTTCTTTAGATAACCTTACATCATTTTCTGTAAATTATGTTACTATCTCTATGTTGAGTGAAAGATAGGCAAAATTACTTTACTTTTTACCTACATATTAACAAATTTACTTTGTAAATGTTCTAATATTTTTTGTAGTCAT 2543 0.3677 MASLRILLLISKLFFIFSKFSAATDTITQFEPLEDNTTLVSKDGTFELGLFTPGSNSPNRYLGIWYKNIPIRTVVWVANRNTPIKDNSTKLSIDKGNNLVLLSRNNTVIWSTNAKTEGVIVVAQLLDSGNLVLREEKDTNPENYLWQSFDYPSDTYLPEMIIGWDLKKGLNRNLTAWKNWDDPSPGDFVAIMSHSNYPEDVMLKGSTKFYRSGPWDGTKFSAIPSVTSSSLVNYTIVSTKDEFSTTYSMKDKSVISRITMNQTLYVRQRLTWNKDSKTWTVSSQLPGDMCDLYNTCGAFGICDSSEAPMCKCLDGFKPKSPENWSQMNWNEGCVHNQTWRCMDKSRDGFHKFSRVKAPDTTRTWVNASMTLDECKNKCWENCSCMAYANSDMKGNGSGCAIWFGDLLDIKLISNAGQDLYIRLAVSETGLSFYFDFGSVSIIFYWKKLYQENQDEKHKLKKKVVVTASTISSVIVMLLILIFVYCSNKAKIEEIITKIKGNNNESEQVFEVPLFDLASIIHATNHFSKYNMLGEGGFGPVYKGTLVDGQVIAIKRLSETSGQGLKEFKNEVKLCAELQHRNLVKVLGCCIQEDEKLLVYEYMANKSLDFFLFDSNRSKLLDWPKRFCIINGIARGILYLHQDSRLRIIHRDLKASNILLDNEMNPKISDFGLARMCGGDQIGGKTNKVVGTYGYMAPEYAFSGIFSIKSDVFSFGVLMLEIAWRLWNEGNPMELIEPSLKDSCVLYEALRCIHIGLLCVQHHPNDRPNMSSVVLLLSNENALPIPKDPSYLVKDTSIENESSLDNLTSFSVNYVTISMLSER 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03857 822 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 183 IPR036426 -
Pste1g03857 822 ProSiteProfiles Protein kinase domain profile. 526 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03857 822 SUPERFAMILY Protein kinase-like (PK-like) 512 796 IPR011009 -
Pste1g03857 822 Pfam D-mannose binding lectin 73 178 IPR001480 -
Pste1g03857 822 Gene3D Phosphorylase Kinase; domain 1 487 601 - -
Pste1g03857 822 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 149 - -
Pste1g03857 822 Gene3D Transferase(Phosphotransferase) domain 1 602 783 - -
Pste1g03857 822 SMART serkin_6 526 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03857 822 Pfam PAN-like domain 341 409 IPR003609 -
Pste1g03857 822 Pfam S-locus glycoprotein domain 210 320 IPR000858 GO:0048544
Pste1g03857 822 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 767 - -
Pste1g03857 822 Pfam Protein tyrosine and serine/threonine kinase 529 773 IPR001245 GO:0004672|GO:0006468
Pste1g03857 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Pste1g03857 822 SMART blect_4 30 152 IPR001480 -
Pste1g03857 822 ProSiteProfiles PAN/Apple domain profile. 341 424 IPR003609 -
Pste1g03857 822 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 490 601 - -
Pste1g03857 822 CDD PAN_AP_plant 343 424 - -
Pste1g03857 822 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Pste1g03857 822 SMART ntp_6 344 423 IPR003609 -
Pste1g03857 822 CDD STKc_IRAK 532 773 - -
Pste1g03857 822 ProSiteProfiles EGF-like domain profile. 286 322 IPR000742 -
Pste1g03857 822 CDD B_lectin 31 152 IPR001480 -
Pste1g03857 822 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 602 722 - -
Pste1g03857 822 Gene3D - 18 149 IPR036426 -
Pste1g03857 822 PIRSF SRK 1 822 IPR024171 GO:0004674
Pste1g03857 822 Pfam Domain of unknown function (DUF3403) 777 820 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03857 Pste-Chr1 19446255 19451377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03857 477 807 Receptor kinase-like Gene Family AT3G45860 49.580 3.14e-112 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03857 PK_Tyr_Ser-Thr 6.2e-46 CL0016