Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03856 TCTCTTCCCGATGTTGCCACGCTGGATTCCGAAGCTAGAACCTTTGAATTGGGTTTCTTCAGCCCAGAAACCGCTACTTAGGAATCTGGTTCAAAAACATCCCAATAAGAACTGTGGCTCCACCAAGTTAAGCATACTAGAAGGAAACCTGGTCCTTCTCACAAAAAACAACACTCTTATTTGGTCAACAAAAGCCAACAACGTTGTAGCACATCTCTTGGACACAGGCAACTTAGTCCTGAGAGATTCCAAGGACAACAATTTTCAAAACTACTTAAGTGCCATTCCCGAAAAGCAAATGTGGAACGGGTCATCGTTGTTCTTCCGAAATGGCCCTTGGAACGGAATTCGCTTCGGTGGCACACCCTGGTTGAAACTTGAAACACCGTCCATTGTTGGGGCTCAATTTTATGTACAACACCAGCAAAACGGGTCCCTGATTTCCAGAATTGTCCTCAACGAAACTGATTACGGTCTTAGGCGTTTCATTTGGGCTGAGGAGAGTCAAAAGTGGGAGTTGTACATGACTGTTCCGGGAGAGTATTGTGACGAGTACAACCACTGTGGCTCCTTCGGTTACTGTGCTATGATGGGGAAGACTCCTATTTGTGAGTGTTTAAATGGGTTTGAGCCAAAATGGCCTCAAAACTGGGTAGGAAAGAATTGGACTCAAGGGTGCGTTCTCAGCAGTAAAAGTTGGAGGTGTAAGGAAAAAAACAAAGACGGTTTCTTATTGTTTAGTAACATGAAGGTTCCAGACACTAACACATCTTGGATTAGTAGAGATACTAGTGTGACACCTGAAGAGTGCAGGGCACAGTGTTGGGAGAATTGTTCCTGTACGGCTTATGGTAACTCGGACATCACTGGAAAGGGAAGTGGTTGTATCCTCTGGTTTGGTCATCTGTTGGACTTGACACTGCTTCCAAATGCAGGGCAAGATCTGTATCTCAGACTCGATATCTCCCAAATAGATCTTGAACTACCTTCATTTGATTTTGATACAATAACACGTGCGACTAATAACTTTTCAAGTGACAACAAGCTTGGTGAGGGTGGATTTGGTCCTGTATATAAAGGCACACTATTAGATGGACAAGATATTGCAGTAAAAAGACTTTCACAGACATCTTCACAAGGATTGATTGAATTTAAGAATGAAGTTATATTTTGTTACAAACTTCAACTTTTGTTAAGTGGTTATATGGCACCTGAATATGCAATTGATGGAGTTTTCTCCATTAAATCTGATTTCTACAGCTTTGGCATTTTGCTATTGGAGATTTTAAGTGGAATGAAAAATAAAGGAATTTCCTACTCAAACAGCAGTTACAATGTTATTGGACATGCATGGAGGTTGTGGAAAGAGTGCATCCCAAAGGAATTCTTTAATACTTATTTGGGGGACTCACACATCATTTCACAAGCTTTGCCATGCATGCATGTTGGTCTTTTATGTGTACAACATCTACCTGATGATAGACCAAATATGACATCTGTAGTGATAATATTAACAAGTGAAAGTAGTTTACCACAACCAAAAGAGCCTGTTTTCTTGACAGAAAAAGTTTCAGTTGAGGAAGATTCTGGGCAAAAGATATATTATTCAACCAATGAAGTAACTATCTCAAAGTTGGAACCGAGA 1645 0.4073 MLPRWIPKLEPLNWVSSAQKPLLRNLVQKHPNKNCGSTKLSILEGNLVLLTKNNTLIWSTKANNVVAHLLDTGNLVLRDSKDNNFQNYLSAIPEKQMWNGSSLFFRNGPWNGIRFGGTPWLKLETPSIVGAQFYVQHQQNGSLISRIVLNETDYGLRRFIWAEESQKWELYMTVPGEYCDEYNHCGSFGYCAMMGKTPICECLNGFEPKWPQNWVGKNWTQGCVLSSKSWRCKEKNKDGFLLFSNMKVPDTNTSWISRDTSVTPEECRAQCWENCSCTAYGNSDITGKGSGCILWFGHLLDLTLLPNAGQDLYLRLDISQIDLELPSFDFDTITRATNNFSSDNKLGEGGFGPVYKGTLLDGQDIAVKRLSQTSSQGLIEFKNEVIFCYKLQLLLSGYMAPEYAIDGVFSIKSDFYSFGILLLEILSGMKNKGISYSNSSYNVIGHAWRLWKECIPKEFFNTYLGDSHIISQALPCMHVGLLCVQHLPDDRPNMTSVVIILTSESSLPQPKEPVFLTEKVSVEEDSGQKIYYSTNEVTISKLEPR 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03856 545 CDD PAN_AP_plant 233 316 - -
Pste1g03856 545 Gene3D - 25 104 - -
Pste1g03856 545 Pfam PAN-like domain 232 302 IPR003609 -
Pste1g03856 545 Pfam Domain of unknown function (DUF3403) 502 545 IPR021820 GO:0004674
Pste1g03856 545 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 84 492 - -
Pste1g03856 545 SMART ntp_6 235 316 IPR003609 -
Pste1g03856 545 ProSiteProfiles Bulb-type lectin domain profile. 1 90 IPR001480 -
Pste1g03856 545 Pfam S-locus glycoprotein domain 105 209 IPR000858 GO:0048544
Pste1g03856 545 Gene3D Transferase(Phosphotransferase) domain 1 393 505 - -
Pste1g03856 545 Pfam Protein tyrosine and serine/threonine kinase 397 497 IPR001245 GO:0004672|GO:0006468
Pste1g03856 545 ProSiteProfiles PAN/Apple domain profile. 232 317 IPR003609 -
Pste1g03856 545 SUPERFAMILY Protein kinase-like (PK-like) 325 498 IPR011009 -
Pste1g03856 545 ProSiteProfiles EGF-like domain profile. 175 212 IPR000742 -
Pste1g03856 545 Pfam D-mannose binding lectin 14 83 IPR001480 -
Pste1g03856 545 Gene3D Phosphorylase Kinase; domain 1 312 392 - -
Pste1g03856 545 SUPERFAMILY alpha-D-mannose-specific plant lectins 39 112 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03856 Pste-Chr1 19404696 19414776 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03856 328 545 Receptor kinase-like Gene Family AT4G23280 32.632 1.73e-32 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03856 PK_Tyr_Ser-Thr 8.9e-07 CL0016