Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03853 GCTACTATTACGACTATCACACCGTTTCAGCCACTTTCCGATGGAACCACCTTGGTTTCCGAAGATGGAACCTTTGAGTTAGGTTTCTTCACCCCAGGTAGTTCCTCAAACTGTTACCTGGGAACCTGGTTCAGAAACATCCCTCCAAAAACCGTTGTTTGGGTTGCCAACCGTGACAAACCAATCACCAACAACAACTTCACCAAGTTAACCATAATAGAAGGAAACCTCGTACTTCTTAACCCAAACAACACTCTTATTTGGTCAACAAACACAACAACAAAAGCCAATGTTGTAGCACAGCTCTTGGATTCAGGAAACTTGGTTTTAAGAGATGAGAAAGACAACAACTCTGAAAACTACTTGTGGCAAAGCTTTGACTATCCTTCGGATACAATTTTACCCGGAATGAAGATAGGCTGGAAAGTTACAACAGGTTTTAATAGGTATCTGAGTGCGTGGAGAAATTGGGAAGACCCATGTTCTGGCAACTTCACTTATGGTGTGACAAGAAGCAATATTCCTGAATTGCAGATATTAAATGGCTCAAAGTTGTTCTATAGAAGTGGCCCTTGGAATGGAATTCGATTCAGCGGTACACCCTCACTAAATCACCGTCCCTTATTCACTTATAATTTTGTTTACGACACAAACGAATATTATTTCCAGTTCTACCCCAGAAATAGGTCCTTAATTTCCAGAATTGTCCTCAACCAAACCCTTCACACTCTTGAGCGCTTCATATGGGTAGAAGAAAGTAAAAAATGGGAACTGAGTTTAAACGTTCCAAGAGATGTTTGTGATGGGTATAACCACTGTGGCTCATTCGGGTACTGTACCACTGGGTCTCCGAAATGTGAGTGTTTAAAAGGGTTTGAGCCAAAATCACCTCAAAAGTGGAGTGAAGGGTGTGTGCATAGTAAAAGTTGGAGGTGCAAGGAGAAAAATGAAGATGGTTTTGTTGTGGTTAATAATATGAAGGTTCCAGATACTAAAAGTTATTGGATAAATAGAAGCATGACAATTGAGAAGTGCAAGGAAAAGTGTTGGGAAAATTGTTCGTGTACAGCTTATGGTAACTCCGACATCATTGGAAAGGGAAATGGTTGTATCCTTTGGTTTGGTCAACTATTTGACTTGCGACTGCTTCCAGATGCAGGACAAGATCTTTATGTTAGATTGGGTATCTCTCAAATAGAAAGAACAGGTATCATCAAGAAAAAAGTGAAAATAAATGAAAGCAAAGAAGATTTAGAGCTATCTTTGTTTGACTTCGATATAATAGCACGTGCCACTAATGACTTCTCAAGTGACAACAAAGTTAGCCAAGGTGGTTTTGGTATTGTATATAAAGGAACATTGTTAGATGGATTAGATATTGCAGTTAAAAGGCTTTCACATACATCTACACAAGGATTAACAGAATTTAAGAATGAAGTTATATTTTGTTCTAAACTTCAGCATCGAAATCTTGTGAAAGCATGGAGGTTGTGGAAAGAGTGCATTCCATTGGAATTCATTGATACTTGTCTGGGGAACTCATACACTTCATCTGAAGCCTTACAATGCATTCTTATTGGTCTCTCATGTGTGCAACACCAACCAGATGATAGACCAAATATGACATCTGTAATTGCCATGTTAACAAGCCAAAGTGCTTTGCCACAACCAAAAGAACCAATTTTCTTAGCAGAAAATGTTTCAATTGAGGAAGATTGTGGACAAATGATTTATTATTCAACCAATGAAGTAACTGTCTCAAGGATGGAACCAAGA 1776 0.3874 ATITTITPFQPLSDGTTLVSEDGTFELGFFTPGSSSNCYLGTWFRNIPPKTVVWVANRDKPITNNNFTKLTIIEGNLVLLNPNNTLIWSTNTTTKANVVAQLLDSGNLVLRDEKDNNSENYLWQSFDYPSDTILPGMKIGWKVTTGFNRYLSAWRNWEDPCSGNFTYGVTRSNIPELQILNGSKLFYRSGPWNGIRFSGTPSLNHRPLFTYNFVYDTNEYYFQFYPRNRSLISRIVLNQTLHTLERFIWVEESKKWELSLNVPRDVCDGYNHCGSFGYCTTGSPKCECLKGFEPKSPQKWSEGCVHSKSWRCKEKNEDGFVVVNNMKVPDTKSYWINRSMTIEKCKEKCWENCSCTAYGNSDIIGKGNGCILWFGQLFDLRLLPDAGQDLYVRLGISQIERTGIIKKKVKINESKEDLELSLFDFDIIARATNDFSSDNKVSQGGFGIVYKGTLLDGLDIAVKRLSHTSTQGLTEFKNEVIFCSKLQHRNLVKAWRLWKECIPLEFIDTCLGNSYTSSEALQCILIGLSCVQHQPDDRPNMTSVIAMLTSQSALPQPKEPIFLAENVSIEEDCGQMIYYSTNEVTVSRMEPR 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03853 592 ProSiteProfiles EGF-like domain profile. 263 298 IPR000742 -
Pste1g03853 592 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 4 495 - -
Pste1g03853 592 Gene3D Phosphorylase Kinase; domain 1 408 501 - -
Pste1g03853 592 SUPERFAMILY Protein kinase-like (PK-like) 422 499 IPR011009 -
Pste1g03853 592 Gene3D - 1 126 IPR036426 -
Pste1g03853 592 ProSiteProfiles Bulb-type lectin domain profile. 3 123 IPR001480 -
Pste1g03853 592 ProSiteProfiles PAN/Apple domain profile. 312 395 IPR003609 -
Pste1g03853 592 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 126 - -
Pste1g03853 592 CDD B_lectin 10 129 IPR001480 -
Pste1g03853 592 SMART ntp_6 315 394 IPR003609 -
Pste1g03853 592 Pfam PAN-like domain 312 380 IPR003609 -
Pste1g03853 592 Pfam D-mannose binding lectin 51 155 IPR001480 -
Pste1g03853 592 CDD PAN_AP_plant 313 394 - -
Pste1g03853 592 Pfam S-locus glycoprotein domain 187 296 IPR000858 GO:0048544
Pste1g03853 592 SUPERFAMILY alpha-D-mannose-specific plant lectins 51 194 IPR036426 -
Pste1g03853 592 SMART blect_4 9 129 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03853 Pste-Chr1 19376258 19388317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03853 423 536 Receptor kinase-like Gene Family AT4G23130 50.877 1.96e-21 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03853 S_locus_glycop 1.8e-29 No_clan