Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03851 TTCTTCTCGAAATTTTCGTATGCCACTGACACCATTACTCAGTCCCGGCCACTTCTTGATGGCAGCACCTTGGTCTCCAAGGAAGGAACCTTTGAACTGGGTTTCTTCACTCCTGGTAGTTCTTCGAACCGCTATGTCGGAATCTGGTTCAAAAACATCCAGGTGAGAAAAATAGTTTGGGTTGCCAACCGTGACAACCCTGCAAAAGATATATCCAACATGTTTTCTCTAAACAAAGAGGGCAACCTCGTACTTCTTGGCCAAAACCAGTCCATTGTTTGGTTGACAAATGTGACAAGAGCAGTTTCAAGTCCTGTTGTGCAACTTTTAGACAGTGGAAACTTAGTTATTAGGGATGAGAGGGACAATGGCAACAGTGAAGAGAATTTTGTGTGGCAGAGCTTTGATTATCCTTGTGATACTCTCTTGCAAGGAATGAAGTTGGGGTGGAACCTTAAAACTGGTCTCAATAGGTATCTGACTGCTTGGAAAAATTCGGAGGATCCATCTTCAGGAGATTTTACTTCAGGGTTGAAGCTTGGAACCAATCCTGAATTGGTTATATGGAAAGACAAAGTTGAGTACTATAGAAGTGGCCCTTGGAATGGGATTTTTTCTAGTGGGGTGTTTGGATTCAGTCCTAATCCACTTTTTGAATATAAATATGTGGAAAATGAAGATGAGGTGTATGTGAGGTACACCCTCAAGAATAGTTCTGTGATTTCAATAATTGTTCTGAACCAAACTCTTTATCTTCGCCAACGCATTACATGGATTCCTCACACTAGGACTTGGAGCGTGTACCAGTCTTTGCCACAGGACAGTTGTGATGTTTATAATGTTTGTGGTGCATATGGGCGTTGTGTGATTAATGCATCCCCTGTGTGCCAATGCTTGGAGGGGTTCAAGCCAAAATCACCCCAAGATTGGAATCAAATGGATTGGACAAAAGGGTGTGTGCATAGTGAACCTTGGAAATGTGGAGTGGATAACAAAGATGGGTTTCGGAGAATTGAAGGGATGAAAATGCCTGATACTACACATTCTTGGATAAATAGAAGTATGACACTAGAAGATTGCAAGGCCAAATGCTTGCAAAATTGTTCCTGCACTGCTTATGCAAACTTGGACACTAGTGGAGGAGGTAGTGGTTGCTCCATTTGGTTTGGTAATCTTGTAGATTTGAGGGTTTCAGAAAGTGGGCAAGATCTTTATGTTCGAATGGCCACTTCAGATACAGGTAAAGCCAATGGTATTCTTCTAACTTTTAATATTATTAGAGTTCCATTGCTTTTATTTATGAATAACAAGAACTTTTGTTTCTTTGTCAAAAAGTATATGCAGATGCTAAACACAAACTCTCCAAAGAAAAATGGAATATGGGCAGAGGAGAAAGATGATGGTGGGCAAGAAAATCTGGAGCTTCCTTTCTTCGATCTTAGTACAATAATTAATGCAACCAATAACTTCTCAACTGAGAACAAGCTCGGTGAAGGTGGTTTTGGGCCGGGTACAATGGTTGATGGACAAGAGATTGCAGTTAAAAGACTTTCAAGAAGTTCTGGACAAGGATCGAAAGAATTTAAAAATGAAGTAATACTATGTACCAAACTTCAACACCGAAATCTTGTCAAGGTTCTTGGTTGTTGCATTGAAGGAGAGGAAAAAATGTTACTCTATGAATACATGCCTAATAGAAGTCTAGATTCATTTATTTTTGATTCAGTTCGAAGTAAACTTTTAGATTGGCCTATGCGTTATAACGTCTTGTGTGCAATCGCTAGAGGACTTTTATATCTTCATCAAGATTCTAGATTAAGAATCATTCACAGAGATTTAAAAGCAAGTAATATATTATTAGACAGTAGTATGAATCCAAAAATTTCAGATTTTGGCTTAGCTAAAATGTGTGGAGGTGATCAAGTTGAAGGGAATACAAACAGAATTGTTGGAACATACGGTTACATGGCACCTGAATATGCTATTGATGGATTATTCTCTATAAAATCAGATGTATTTAGCTTTGGCGTACTGCTGTTAGAAATTATCAGTGGAAAGAAAAACAGAACTGTTACATATGAAGAGCGTTGTGATAATCTTATAGGACATGCATGGAGATTGTGGAATGAAGACATTCCAGAACAATTGATTGATTCTAGTCTGCTGGATTCATGTAATGTATCTGAAGTTGTGCCTTGCATTCAGGTTGGTCTTTTATGTCTGCAACATCATCCCGAAGATAGGCCAAATATGACATCTCTGGTTGTAATGTTGAGCAGTGAAAATGTTTTACCTCAACCTAAGATACCGGGTTTCTTAATTAAAAATATGTCAATTGAAGGGGAGCAATCTTGTGGTAGACAAGAATCTTGTTCAGTCAATGAAGTAACTGTTTCACTGTTAAATGCTAGA 2412 0.3864 FFSKFSYATDTITQSRPLLDGSTLVSKEGTFELGFFTPGSSSNRYVGIWFKNIQVRKIVWVANRDNPAKDISNMFSLNKEGNLVLLGQNQSIVWLTNVTRAVSSPVVQLLDSGNLVIRDERDNGNSEENFVWQSFDYPCDTLLQGMKLGWNLKTGLNRYLTAWKNSEDPSSGDFTSGLKLGTNPELVIWKDKVEYYRSGPWNGIFSSGVFGFSPNPLFEYKYVENEDEVYVRYTLKNSSVISIIVLNQTLYLRQRITWIPHTRTWSVYQSLPQDSCDVYNVCGAYGRCVINASPVCQCLEGFKPKSPQDWNQMDWTKGCVHSEPWKCGVDNKDGFRRIEGMKMPDTTHSWINRSMTLEDCKAKCLQNCSCTAYANLDTSGGGSGCSIWFGNLVDLRVSESGQDLYVRMATSDTGKANGILLTFNIIRVPLLLFMNNKNFCFFVKKYMQMLNTNSPKKNGIWAEEKDDGGQENLELPFFDLSTIINATNNFSTENKLGEGGFGPGTMVDGQEIAVKRLSRSSGQGSKEFKNEVILCTKLQHRNLVKVLGCCIEGEEKMLLYEYMPNRSLDSFIFDSVRSKLLDWPMRYNVLCAIARGLLYLHQDSRLRIIHRDLKASNILLDSSMNPKISDFGLAKMCGGDQVEGNTNRIVGTYGYMAPEYAIDGLFSIKSDVFSFGVLLLEIISGKKNRTVTYEERCDNLIGHAWRLWNEDIPEQLIDSSLLDSCNVSEVVPCIQVGLLCLQHHPEDRPNMTSLVVMLSSENVLPQPKIPGFLIKNMSIEGEQSCGRQESCSVNEVTVSLLNAR 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03851 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 5 135 - -
Pste1g03851 804 Gene3D Transferase(Phosphotransferase) domain 1 563 766 - -
Pste1g03851 804 ProSiteProfiles PAN/Apple domain profile. 327 409 IPR003609 -
Pste1g03851 804 ProSiteProfiles Bulb-type lectin domain profile. 9 130 IPR001480 -
Pste1g03851 804 SMART ntp_6 330 408 IPR003609 -
Pste1g03851 804 SMART blect_4 15 138 IPR001480 -
Pste1g03851 804 SUPERFAMILY Protein kinase-like (PK-like) 473 767 IPR011009 -
Pste1g03851 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 326 408 - -
Pste1g03851 804 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 749 - -
Pste1g03851 804 CDD B_lectin 15 138 IPR001480 -
Pste1g03851 804 Pfam Protein tyrosine and serine/threonine kinase 492 757 IPR001245 GO:0004672|GO:0006468
Pste1g03851 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 455 562 - -
Pste1g03851 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Pste1g03851 804 Pfam Domain of unknown function (DUF3403) 759 804 IPR021820 GO:0004674
Pste1g03851 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 169 IPR036426 -
Pste1g03851 804 Gene3D - 3 135 IPR036426 -
Pste1g03851 804 ProSiteProfiles EGF-like domain profile. 272 308 IPR000742 -
Pste1g03851 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 563 766 - -
Pste1g03851 804 Pfam D-mannose binding lectin 58 164 IPR001480 -
Pste1g03851 804 ProSiteProfiles Protein kinase domain profile. 490 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03851 804 CDD PAN_AP_plant 327 409 - -
Pste1g03851 804 Pfam PAN-like domain 327 395 IPR003609 -
Pste1g03851 804 Gene3D Hepatocyte Growth Factor 326 409 - -
Pste1g03851 804 SMART serkin_6 490 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03851 804 PIRSF SRK 1 804 IPR024171 GO:0004674
Pste1g03851 804 Gene3D Phosphorylase Kinase; domain 1 464 562 - -
Pste1g03851 804 Pfam S-locus glycoprotein domain 196 306 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03851 Pste-Chr1 19371184 19374620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03851 419 776 Receptor kinase-like Gene Family AT4G23230 53.039 8.08e-121 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03851 PK_Tyr_Ser-Thr 9.6e-42 CL0016