Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03849 ATGGCCTTTCCAGTACCTCTCATGCTTATCCTAGCCAGCCTTGTTTTTTTCATATCTAAAACTTCTTCTGAAACAGACTCCCTAAGTCAGCTTCAGCCACTTTCCGATGGAAACACCTTGGTTTCTAAAGAAGGTACCTTTGAGTTAGGTTTCTTCAGCCCAGCAGGTAGCTCCACAAACCGCTACCTAGGAATCTGGTTCAAAAACATCCCAATAAGAACCATCGTTTGGGTTGGCAATCGTGACAACCCAATAACCAATTCAAATAACAACAACAAGAATTTCACCAGCAAGTTAACCGTATCAAAAGAAGGAAACCTCGTCCTTAGTAGTAGTTACAGCAGTACCAGTAACAACACTGTTTATTGGTCAACAAATGCAACAACAAAACCGGTCAACGCCATAGCACAGCTCTTGGACACAGGCAACTTGGTCATAAGAGATGAGAAAGACAATTCCGGAAACTACTTTTGGCAAAGCTTTGACTATCCTTCAGATACACTTTTACCAGGAATGAAGCTAGGATGGGATGTTGCAACAGGCCTGAATAGGTACCTCACTACTTGGAAAAACTGGGAAGACCCTTCTTCAGGTCACTTTGCTTATGGAGTTTCGAGAAGCAACATCCCGGAAATGCAAATATGGAATGGCTCATCAGTGTTCTACAGAAGTGGCCCTTGGAGTGGCTTTCGATTCAGCGCCACACCCGTACCGAAACGCCGTTCATCGGTGAATATTAACTTTGTTGACACCCCAGAAGAGAGTTATTACCAACTTTTCCCAAGGAACAAGTCAACGATCATAAGAACCGTTGCTAACCAAACCGTTTTCAAGCTTCAACGCTTCGTTTGGGTGGAAGAAGATCAAAACTGGAAACTGGATTTAGTAATCCCTAGAGACGACTTCTGCGGTTATAACCACTGTGGCTCTTATGGATTCTGTGCAGTGAAAGATAACTCCTCAACGTGTGAATGTTTACGTGGGTTTGAGCCAAAATCGCCACAAAATTGGAGTGAAGGATGTGTGAATAGAAGTGAAACATGGAAGTGTAGGGAGACAAATAGTGACGGTTTTGTTAAGATTAGTAACATGAAAGTTCCTGACACTAAAACAGCATGGATGAATAGAAGTATGACAATTGAGGAATGCAGGGCTAAGTGTTGGGAAAATTGTTCTTGTACGGCTTATGCTAATTCGGAGATAACTGAAAATGGAAGTGGTTATAGCGGTTGTATAATATGGTTTGGTGATTTATTGGATTTAAGACTGATGCCAGATGCAGGGCAAGATCTGTATGTCAGATTGGATATCTCCACAATAGGTAAAGAGCATGCAGATAGATCAAAGATTGTGGTAGCAACCGCTGTTTCATTTATTATTGTGATGCTTTTAATATTAACGTTCGTTTACCAGAGAAAGAAGACCAAATTCAGAGGCAAAGGGATTATCAAGACAAAAGATAATATTATTAAAAGTGAAAAAGAAGAAGATCTAGAACTACCTTTGTTTAACTTTGATACAATAGCATCTGCTACTGGTGATTTCTCAAGTGACAACATGCTTGGCCAAGGAGGTTTTGGTCCTGTATATAGAGGCACATTACCAGATGGACAAGATATTGCAGTCAAAAGGCTTTCGGATACATCTGCCCAAGGACTAACCGAATTTAAGACTGAGGTTATATTTTGTTCTAAACTTCAACATAGAAATCTTGTCAAAGTCCTTGGATATTGTATTGAAGAGCATGAAAAACTACTTCTCTATGAATACATGCCTAACAAAAGCTTGAACTTCTTTCTCTTTGATACTTCTCAAAGCAAACTTCTAAATTGGTCTAGGCGATTAAGCATTATAAATGGAATTGCTCGAGGACTTCTTTATCTTCACCAAGACTCTAGATTGAGGATCATACATAGAGATTTAAAATCAAGTAATATTTTGTTAGATCACAATATGAATCCAAAAATTTCTGATTTTGGATTAGCTCGAATGTGTAGAGGTGATCAAATTGAAGGAAGTACAAGCAGAGTTGTTGGTACATATGGTTATATGGCACCTGAATATGCAATTGGTGGAGTATTTTCCATCAAATCTGACGTATATAGCTTCGGTGTTATATTACTAGAGGTTTTAAGTGGAAAGAAAAACAAAGAGTTTTCCTACTCAAGCCAGAACTATAATCTTATTGGACATGCATGGAAGTGTTGGAAAGAGTGCAACCCCAAGGAATTCGTTGATACTTGTTTGGGAGGCTCATACATTCTTTCTGAAGCCTTGCGATACATGAATGTTGGTCTTTTATGTGTGCAACATAAACCTAATGATAGACCAAATATGACATCTGTAGTTACAATGTTAACCAGTGAAAGTGTTTTACCACATCCAAAAAAACCCATTTTCTTAATAGAAAGGGTTTTAGTTGAAGAAGATTCAGAGCAAAATATGTATTATCCAACAATTACTATCTCAGAGATGGAACCAAGATAA 2487 0.3868 MAFPVPLMLILASLVFFISKTSSETDSLSQLQPLSDGNTLVSKEGTFELGFFSPAGSSTNRYLGIWFKNIPIRTIVWVGNRDNPITNSNNNNKNFTSKLTVSKEGNLVLSSSYSSTSNNTVYWSTNATTKPVNAIAQLLDTGNLVIRDEKDNSGNYFWQSFDYPSDTLLPGMKLGWDVATGLNRYLTTWKNWEDPSSGHFAYGVSRSNIPEMQIWNGSSVFYRSGPWSGFRFSATPVPKRRSSVNINFVDTPEESYYQLFPRNKSTIIRTVANQTVFKLQRFVWVEEDQNWKLDLVIPRDDFCGYNHCGSYGFCAVKDNSSTCECLRGFEPKSPQNWSEGCVNRSETWKCRETNSDGFVKISNMKVPDTKTAWMNRSMTIEECRAKCWENCSCTAYANSEITENGSGYSGCIIWFGDLLDLRLMPDAGQDLYVRLDISTIGKEHADRSKIVVATAVSFIIVMLLILTFVYQRKKTKFRGKGIIKTKDNIIKSEKEEDLELPLFNFDTIASATGDFSSDNMLGQGGFGPVYRGTLPDGQDIAVKRLSDTSAQGLTEFKTEVIFCSKLQHRNLVKVLGYCIEEHEKLLLYEYMPNKSLNFFLFDTSQSKLLNWSRRLSIINGIARGLLYLHQDSRLRIIHRDLKSSNILLDHNMNPKISDFGLARMCRGDQIEGSTSRVVGTYGYMAPEYAIGGVFSIKSDVYSFGVILLEVLSGKKNKEFSYSSQNYNLIGHAWKCWKECNPKEFVDTCLGGSYILSEALRYMNVGLLCVQHKPNDRPNMTSVVTMLTSESVLPHPKKPIFLIERVLVEEDSEQNMYYPTITISEMEPR 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03849 828 Gene3D Phosphorylase Kinase; domain 1 479 590 - -
Pste1g03849 828 Pfam Protein tyrosine and serine/threonine kinase 518 786 IPR001245 GO:0004672|GO:0006468
Pste1g03849 828 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 777 - -
Pste1g03849 828 CDD PAN_AP_plant 351 435 - -
Pste1g03849 828 ProSiteProfiles Bulb-type lectin domain profile. 25 159 IPR001480 -
Pste1g03849 828 Pfam S-locus glycoprotein domain 222 333 IPR000858 GO:0048544
Pste1g03849 828 Gene3D - 19 161 IPR036426 -
Pste1g03849 828 SUPERFAMILY Protein kinase-like (PK-like) 499 786 IPR011009 -
Pste1g03849 828 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 161 - -
Pste1g03849 828 CDD B_lectin 32 164 IPR001480 -
Pste1g03849 828 ProSiteProfiles PAN/Apple domain profile. 350 436 IPR003609 -
Pste1g03849 828 PIRSF SRK 1 828 IPR024171 GO:0004674
Pste1g03849 828 Pfam PAN-like domain 350 421 IPR003609 -
Pste1g03849 828 Gene3D Transferase(Phosphotransferase) domain 1 591 793 - -
Pste1g03849 828 SMART blect_4 31 164 IPR001480 -
Pste1g03849 828 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 591 794 - -
Pste1g03849 828 ProSiteProfiles EGF-like domain profile. 299 335 IPR000742 -
Pste1g03849 828 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 195 IPR036426 -
Pste1g03849 828 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 480 590 - -
Pste1g03849 828 Pfam D-mannose binding lectin 74 190 IPR001480 -
Pste1g03849 828 SMART ntp_6 353 435 IPR003609 -
Pste1g03849 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Pste1g03849 828 ProSiteProfiles Protein kinase domain profile. 515 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03849 828 SMART serkin_6 515 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03849 828 CDD STKc_IRAK 521 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03849 Pste-Chr1 19345091 19350445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03849 503 810 Receptor kinase-like Gene Family AT4G11530 55.806 7.41e-117 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03849 PK_Tyr_Ser-Thr 1.9e-45 CL0016