Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03843 GCCTCAATATGCAATGATTGAAGAAATTGTTGGAATGATAACAAATATATTGGGTCATAAATTTTGTAGTCTTCCAAATGATAATCTAGTTGGGATAGAATCTCATGTTAAAAAATTAGCAAAGCTTTTATTTTTGGAGTCAACCGATGAAGTTCGCGTTGTCGGAATTAGTGGCATGGGAGGCATAGGTAAGACAACTCTTGCTCGTGCATTATATCAAGGAATCTCTCATCAATATGACTTTAGAGTACAAAAGCAATTACTTTCTCAGTGTCTAAATGAAAAAAATCTTGAGATTTATAATGTATACGAGGGAACATGTTTGACATGGACTAGACTGCACCATGCAAGAGGATTTATAGTTCTTGATAATGTTGATCAAGATGAACAGTTGAAGATGTTTACCGAGGGTAGAGATACTTTGTTACGAGAATGCCTAGGTAGGGGGAGCAAAGTCATCATAATTTCTAGGGATCAACAAATATTGAAGACACATAAAGTAGATGCTATTTACAATGTCCGAACAATGAATCACAAAGATGCTATTAAGTTGTTTTGCAAGAAAGCTTTCAAAAGTAATTTTGTTATGAGTGAATATCGAAAGTTGTGGAGAAGTACATTGGATAGGCTAAGAGAAAATAAAAGTAAAAATATTATGAATGTGTTGAGAATAAGTTTTGATCAATTAGAGGACATCGAAAAGGAAATATTTCTCGATATTGCTTGCTTCTTTAATGGTTGTGTTGTGAAAGATGCAAAGGAAGTGCTCGATTTTCGTGGACTTCATCCTGAATATGACCTACATGTTCTTGTTGATAAATCACTCATAACCATGACAATAGTAATTCAAATGCACGACTTGTTGAGCGATTTGGGAAAGTATATCATTCGAGAAAAATCACCTAAGAAGCCAAGGAAGTGGAGTCGATTATGGGATTTCTATGATCTCCACAAAGTTATGTCAGATAATATGGTGGCAGAAAATGTTGAGGCCATAGTTATTGACAAACTTAAACCTCAAATAACAATGAAGGTCGATGCTCTATCCAATATGAGTCACCTTAAGTTGCTCATACTTGGAAAATATTGTTACCGTGACTTGGCAATAAATTTTTCTGGAAGGCTTGATAATCTTTCCAATGAATTAGGATATCTACATTGGATAAACTATCCTTTTGATTCTCTGCCACAATGTTTTGAGCCGAACAAACTAGTTGAATTGATCATGCGCTATAGCAAAATCAAACAACTTTGGGAAGGCACAAAGACTCTATACAATTTGAGATGTTTGATTCTCTCTTACTCCAAAAGTCTCATAGAGTTGCCAAATATTAGAAAGGCCCCAAATCTTGAGGTGGTTGATCTCCAAGGATGTTTACAACTCAAGCAAATAAGGCCTTACATTGGTCATCTAAGAAAGCTGAATATTCTGAATTTAAAAGATTGCAAAAGTCTTGTCAAGTTGCCACATCTTGGAGAGGCCTTAAATCTTCAAGAGCTAGATCTCGAAGGATGTACGCAACTCAGACATATTGATCCATCCATTGGTCTTCTGAAAAAGCTTTCTCGTTTGAATTTGGAGAACTGCAAAAATCTAGTAAGCTTACCCAATAGCATGTTAGGCCTCACTTCTCTTCAATATCTAAGCCTTCGTGGCTGTTTAAAATTATATAATATCCAGTTATTAGATGAACCAAGGGATGTAATGCACTTGACAATGCACTTGAAAAAGCTTTATATATGTGAAGCTCCTATTCATTCCCAATCAACAGCTTCCTACTTCAAAGAAAATAGAAGTCCATTTAGTTGTTTAGTTCCTTCCTCACGAGTTTTCCCATGTATGCATGAACTTGATGTAAGTTTCTGTAATTTAGTTCAAACCCCTGATGCTATTGGAAATTTATGTTGCTTAGAAAGACTAGATTTAAGTAGAAACAATTTTGCTACCCTGCCTAACCTCAATGAGCTTTCCAAACTAGTCTATTTGAGGTTACAACATTGCAAGCAGCTGAAATCTTTGCCTAAGCTCCCTTCACAAATTGATTTCTCGCCACCATTTCTCTGGCGGCATTTTGGACGAGATATAGGATTATACATTTTCAACTGCCCAAAATTACTTGAGAGGGAATGCTGCATTAACATGGTAAGCATCGATGCATCTCCTGTTATGAATGACAATAACTGGATTGGCATTGCATTTTGTGCAATCTTCTCGGTACCTCGTGAAACAGTTTTAGCAACAGGTCCTTCGAATGCAAAAGTAGTGTTTCGTGATTTTGGTGATATTCCAGTGGATTTTTATGGAGATCCAGAACTGGTTTCAGATGAATCATATCACATGTGGCAATTCTTTGTCAATAGAAGAAAATTTAGTCAACAATGTGGACTCTCGTCATTTCTCAAAGCTCATCTTGGTAGCTTGAAAAGAAAATGTAGAAGAGGGCAGGAGCCTGGTTTTCATTCTGACGTGAAGAAATACGGGTATCGATGGGTATATAAACATGATCTTGAATCAAATCCGCGGAAGCGCAAGTTTTTTGCCGTTGAACATGAAGGAAGAAGAAGCAAAGCTAGGACTTCAACAAAATGGGAAAAGGAGGCTACC 2605 0.3647 MIEEIVGMITNILGHKFCSLPNDNLVGIESHVKKLAKLLFLESTDEVRVVGISGMGGIGKTTLARALYQGISHQYDFRVQKQLLSQCLNEKNLEIYNVYEGTCLTWTRLHHARGFIVLDNVDQDEQLKMFTEGRDTLLRECLGRGSKVIIISRDQQILKTHKVDAIYNVRTMNHKDAIKLFCKKAFKSNFVMSEYRKLWRSTLDRLRENKSKNIMNVLRISFDQLEDIEKEIFLDIACFFNGCVVKDAKEVLDFRGLHPEYDLHVLVDKSLITMTIVIQMHDLLSDLGKYIIREKSPKKPRKWSRLWDFYDLHKVMSDNMVAENVEAIVIDKLKPQITMKVDALSNMSHLKLLILGKYCYRDLAINFSGRLDNLSNELGYLHWINYPFDSLPQCFEPNKLVELIMRYSKIKQLWEGTKTLYNLRCLILSYSKSLIELPNIRKAPNLEVVDLQGCLQLKQIRPYIGHLRKLNILNLKDCKSLVKLPHLGEALNLQELDLEGCTQLRHIDPSIGLLKKLSRLNLENCKNLVSLPNSMLGLTSLQYLSLRGCLKLYNIQLLDEPRDVMHLTMHLKKLYICEAPIHSQSTASYFKENRSPFSCLVPSSRVFPCMHELDVSFCNLVQTPDAIGNLCCLERLDLSRNNFATLPNLNELSKLVYLRLQHCKQLKSLPKLPSQIDFSPPFLWRHFGRDIGLYIFNCPKLLERECCINMVSIDASPVMNDNNWIGIAFCAIFSVPRETVLATGPSNAKVVFRDFGDIPVDFYGDPELVSDESYHMWQFFVNRRKFSQQCGLSSFLKAHLGSLKRKCRRGQEPGFHSDVKKYGYRWVYKHDLESNPRKRKFFAVEHEGRRSKARTSTKWEKEAT 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03843 864 PRINTS Disease resistance protein signature 108 122 - -
Pste1g03843 864 PRINTS Disease resistance protein signature 49 64 - -
Pste1g03843 864 PRINTS Disease resistance protein signature 465 481 - -
Pste1g03843 864 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 236 IPR027417 -
Pste1g03843 864 Gene3D - 16 167 IPR027417 -
Pste1g03843 864 Pfam Leucine Rich Repeat 399 418 IPR011713 -
Pste1g03843 864 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 469 681 IPR044974 GO:0006952
Pste1g03843 864 Gene3D Ribonuclease Inhibitor 588 701 IPR032675 -
Pste1g03843 864 Gene3D Ribonuclease Inhibitor 489 567 IPR032675 -
Pste1g03843 864 Gene3D Ribonuclease Inhibitor 333 488 IPR032675 -
Pste1g03843 864 SUPERFAMILY L domain-like 279 725 - -
Pste1g03843 864 Pfam NB-ARC domain 29 190 IPR002182 GO:0043531
Pste1g03843 864 ProSiteProfiles Leucine-rich repeat profile. 632 653 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03843 Pste-Chr1 19263946 19267276 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03843 26 581 WRKY Transcription Factor Family AT5G45050 30.335 3.18e-67 242