Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03841 ATGAGAAATCTTGAGTTGCTCATACTCAATGCTGGGAATTTTGAAGGAAGCATAGATTATCTTTCCAACGAATTACGATATCTTGACTGGCAAATTTATCCTTTTAAGTGTTTACCACAAAGTTTTGAGCCGGGCAAACTAGTTAAATTGTCCTTGTGGGGGAGCAAAATAAAACAATTGTGGAAAGGCAAAAAGCATCTACACAATTTGAAAAGTTTGGATCTCTCTTTTTCCAAAAATCTAATTGAGCTTCCCGATTTTGGTGACGCCCTAAATCTTGAGGAGCTATATCTCCAGGGATGTAAACAACTTAAGCAGATTCATCCATCCATTGGTCATCTAAAAAAGCTTTTGTATGTGTATTTGGTAGGATGCCAAAGTCTTACTAATATACCACATATTGGAGGGGCCATAAATCTAAGAGACCTATATCTCCAAGGATGTGTAAAACTCAGATTCGTTGATCCATCCATTGGTCTTTTGACAAAACTTTCACATTTGAATTTGAAAAACTGCCAAAATTTAGAAGGTTTACCCAAGAGCATATTGGGTCTCTATTCTCTTGAATATTTGAATCTTTCTTGCTGTTTAAAACTGCAATTATTAGATGAACCAAGGGATGAAACACATTCAGTTAGCTGTTTATGGCCTTCCTTTGCAATTTTCCCACGTATGGTTAAACTTGATCTAAGTTGCTGTAATTTAGTTCAAATCCCTGAAGCTGTTGCAAATTTATGCTGCTTAGAAAGGCTAGATTTAAGTGGAAACAGTTTTGCTACACTGCCAAGCCTTAAGGATCTTTCCAAACTATACTGTTTAAAGTTACAACATTGCAAGAATCTGACATGTTTGCCTGAGCTCCCTTCACGTGTTGGCTTCGAGTCATCAAATGACTGTGTTGAAAGTAATGTAGGACTATACATTTTCAACTGTCCAAAATTAGTTGAGAGGGAATCTCACATGAACATTGGCTTTTCGTGGATGCTACAACTTACTCAGGTGTGCATGCTCTTTTCCTTCCTTGTTCAATCTCTTCCTGCGTTTCACAAAGATGGATATTCTACAACGGAAAGCATTATTCCTGGAAGTAAAATGCCAGAGAGGTTCAACAATCTTGAAGAGAGCACAGACAATTACATAAGCATAGACACATCTCCCATCATGAATGACAATAAATGGATTGGCATTGTGTTTTGTGTAATATTCAAGGTGCCTTATAAAAGAGATTTAGCAATTGGTCCTTCACTGGAAGAAAGATACTCTCGTGGTTTCCTTGAAATTCCGGTGAATTTTTATGGAAATCCAGAACTAGTTTTGGACAAATCAGATCACGTGTGGCTATTTTTTTTCAATCAAAAGCGATTCATGTATGAATGGGGTCAGTCATACGGTGGTAGCTCAAAATGCAATATTAAAATACACGATGGACTGGGTTTTAATGTTCAAGTGAAGAATTACGGATATTTCTGGGTATATGAACAAGATCTACAACTTTCAAATCCGGTGCCCAGGAAGCGAAAATTTTTGGCAATTGAGCAAAATGAAGGAAGAATCTCAGCAAAATAG 1566 0.3697 MRNLELLILNAGNFEGSIDYLSNELRYLDWQIYPFKCLPQSFEPGKLVKLSLWGSKIKQLWKGKKHLHNLKSLDLSFSKNLIELPDFGDALNLEELYLQGCKQLKQIHPSIGHLKKLLYVYLVGCQSLTNIPHIGGAINLRDLYLQGCVKLRFVDPSIGLLTKLSHLNLKNCQNLEGLPKSILGLYSLEYLNLSCCLKLQLLDEPRDETHSVSCLWPSFAIFPRMVKLDLSCCNLVQIPEAVANLCCLERLDLSGNSFATLPSLKDLSKLYCLKLQHCKNLTCLPELPSRVGFESSNDCVESNVGLYIFNCPKLVERESHMNIGFSWMLQLTQVCMLFSFLVQSLPAFHKDGYSTTESIIPGSKMPERFNNLEESTDNYISIDTSPIMNDNKWIGIVFCVIFKVPYKRDLAIGPSLEERYSRGFLEIPVNFYGNPELVLDKSDHVWLFFFNQKRFMYEWGQSYGGSSKCNIKIHDGLGFNVQVKNYGYFWVYEQDLQLSNPVPRKRKFLAIEQNEGRISAK 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03841 521 ProSiteProfiles Leucine-rich repeat profile. 247 268 IPR001611 GO:0005515
Pste1g03841 521 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 193 IPR044974 GO:0006952
Pste1g03841 521 Gene3D Ribonuclease Inhibitor 137 334 IPR032675 -
Pste1g03841 521 Gene3D Ribonuclease Inhibitor 1 136 IPR032675 -
Pste1g03841 521 SUPERFAMILY L domain-like 2 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03841 Pste-Chr1 19248050 19249824 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03841 13 251 WRKY Transcription Factor Family AT4G12020 35.581 2.78e-30 124