Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03837 GAACAACAAGCGGAGATTGAAGAAATTGTTCAAAGTATAACAAAAAAATTGGGTTCCAAATTTTCAACTCTTCCAAAAGATAATCTATTTGGTATGAAGTCTCATTTTGAAGAATTAGTACGATTTTTAAATCTGGGGTCAAGTAATGGTGTTCAAGTTCTTGGAATTAGTGGAATGAGTGGAATAGGAAAGTCAACTCTTGCTCGTGCTTTGTATGAAAAATTGTCTGAGCTATATCAATTTCGTTGTTATATTGAGGATTTACTTCGTCAGTGTCTACAAGAAGAAAATCTAAGGATTGACAATGTAGCTGATGGAACATGTTGGATATGGAATAGCTTACAGAAGGAAAGGGCACTAATAATTCTAGATAATGTTACCAAAGCTAAACAACTAAAGATATTTGCAGGGGGAAGAGATGATCTATTACGTCATTGTCTAGGAGGAGGTAGCATAATCATCATAATTTCTACAGATCAACAAATATTGAAAGCACATGGAGTACATGACGTGTACCAAGTCTATCCATTGAATTCCTATGACAGTCTTAGTTTGTTTTGCAACAAAGCTTTCGAAAGAAATTATATTATGAGTAATGATTATAAACAATTGACAGATGATGTACTATCACATCTTGAAGGTCACCCCTTAGCAATTGAAGTATTGGGTTCAAATTTGTTTGGTCAAGATGTAGATGTCTCTTATTGGAGAAGTGCATTGGCTAGGCTAAGAGAAAAAAAAGAAAAAAAGATATGGGATGTGTTTAGAATAAGTTATGATGAGTTGGAAGATGAGGAGCAACTAATATTTTTAGATATTGCTTGCTTTTTTAACTATGACGCTGATTTGGAACGTGTGGAAACAATGTTAAATGCTCGTGGATTCAATGTAGAAGTCGGCTTACAAGCTCTCACTGATAAATCACTCGTATACATTACTAATGGTACAATTACAATGCATAATCTTTTGGCAGATTTTGGCAAGTTTATTGTTAAAGAAAAATCACCTAACGAGCAAAGAAAATGGAGTAGGCTGTGGAATTACATAGATTTTTACGAAGTTATGTCAGACAATATGGAAGCAATAAATGTTGAAGCGATAGTGATTGAGGAATATAATGTAGACAAAAAGATTGATCTTCAAGCATCAATGAAAGGCGATGCTATGTCAAAAATGAAAAACCTCAAGATGCTCATATTTGAAGATGTTTATTTTGAAGGAAGCAGTCTCAATTATCTTTCTCATGAATTAAAATATCTTGAATGGAGGAGGTATCCTTTTGAGTGTTTACCAGAAAGTTTTGAGCCGCGCAAACTTGTAAATTTGTGCTTGAGGGAGAGCGAAATCCAAGAATTATGGAAAAGCCGGAAGCCTCTACACAAATTGAGAAGTTTGGATCTCTCTTATTGCTCCAATCTAATTGGGTTGCCAGATCTTGGGGAGGCCAGAAATCTTGAGTCGCTAAATCTTAAAGGATGTATGAGACTTGAGCAAATTCATCCATCCATTGGTCGTTTAAGAAAGCTTTCAGAGGTGTATTTGGGAAGCTGTTGTAGTCTTACTTATTTACCACATTTTGGAGAGGCCATAAGTCTTGAAATTCTAGATCTGTCAAGATGTGACGAACTCAGATTCATCGATCCATCCATTGGTCTTTTAACAAACCTTATTGAGTTGAGTTTGAAAAACTGTAAAAATCTAGAAAGCTTACCCAAGAGCATATTGGGCATTAATTCTCTTAAATTTTTTATTTTGACCGGCTGTTTAAAACTGCATATGTTCTTCATTCCTTGCTCTCCAATTTTCCCACTTATGGTTGTGCTTCATCTATGTTTTTGTAACATAGCTGAAATCCCTGATGCTATTGGAAATTTATGTTCCTTAGAAAGGCTAGATTTAAGTGGAAACAGTTTTGCTACACTGCCCAGCCTTACAAAGCTTTCCAAACTATACCATTTAGATTTACAACAATGCAAGCATATGAAGTATTTGCCTCAGCTCCCTTCATCAATTGGCTTTAAGCCCTCAAATGGCTTGTTTCGAAGTTATGATGTAGGATTATTCGTTTTCAACTGTCCAAAACTAGTTGAGAGGGAAGTCTCGACTACAATTGGGTTTCCATGGCGGCAACAATTGACTCAGGCATTTCATGAAGAAAAATCCATAACTATTGGAAGCGTTATTCCTGGTAGTACACTGCCAGAGGTGTTCAACAATCAGTATGACTGGACGGGCAATTACGTGAGCAAAAGCATAGATACATCTCCTGTTATGCATGACGAAAGATGGATTGGTGCTGAGCTTTGTGTAATATTCACAGTACCTTGTTATATTAGGATTCCGGTGGGTTTTTATGGAAATAGACAACTAGTTTCAGATGGATCAGATCACATGTGGCTAAGTTTTCAGCCACGAGACAGAATACTTGATGGTCTTAACTTAAAATGCTACATTGTATTAGGTGAGGGACCAGGTGTTCATGTTGAAGTAAAGACATATGGGTATCGTTGGGTATATAAAGATGATCCAACATGTAAGCGCAAGCATTTGGCAATTGAACAAAGTGAAGGAAGTACCCTAGAAAAACGGGGAAAGGATGCAGCCTACTCCTCCCAGGAAAACACAATCAACTGGTATTTTACTCGATTTGCTCGTCTTCTTACTCTGCTAGCCAATCCTTGCTCTCAGTTTAGGAACGATTCATCCATCCATCCATCCATTTGCCGTCTAAGAAATCTTTCTGAGGTTGATTTGCTATACTGCGAGAGACTCACTAATTTACCAGATTTTGGAGGGGCCATAAATCTTGAAAGACTTTCTGGCAGAATAGGCCATAAATCTTGCAAAGCTAAATCTTTCACAATGTATAGAACTCAGTTCATCGATGCATCCACTGGTCTTTTAAAACACCTTACTCATTCAGATTTGGCAGGCTGCAAAAATCTAGAAAGCTTACTCAAGACCATGTTGGATCTAAATTCTCTTGAACATTTGAATCTTTTCGTCTGTTTAAAACTGAAGTCATCAGACGAACCAAGGGATGCTAAGGAATGTGATAGTTGTTTATTTCCTTCCTCCCCTATTTTCCCATCTATGGTTCAACTTGATCTAAGACTGGATTTAAGTGGAAAAGCTACACTACCCAATCTTAAGAAGCTTTCCGAA 3165 0.3681 EQQAEIEEIVQSITKKLGSKFSTLPKDNLFGMKSHFEELVRFLNLGSSNGVQVLGISGMSGIGKSTLARALYEKLSELYQFRCYIEDLLRQCLQEENLRIDNVADGTCWIWNSLQKERALIILDNVTKAKQLKIFAGGRDDLLRHCLGGGSIIIIISTDQQILKAHGVHDVYQVYPLNSYDSLSLFCNKAFERNYIMSNDYKQLTDDVLSHLEGHPLAIEVLGSNLFGQDVDVSYWRSALARLREKKEKKIWDVFRISYDELEDEEQLIFLDIACFFNYDADLERVETMLNARGFNVEVGLQALTDKSLVYITNGTITMHNLLADFGKFIVKEKSPNEQRKWSRLWNYIDFYEVMSDNMEAINVEAIVIEEYNVDKKIDLQASMKGDAMSKMKNLKMLIFEDVYFEGSSLNYLSHELKYLEWRRYPFECLPESFEPRKLVNLCLRESEIQELWKSRKPLHKLRSLDLSYCSNLIGLPDLGEARNLESLNLKGCMRLEQIHPSIGRLRKLSEVYLGSCCSLTYLPHFGEAISLEILDLSRCDELRFIDPSIGLLTNLIELSLKNCKNLESLPKSILGINSLKFFILTGCLKLHMFFIPCSPIFPLMVVLHLCFCNIAEIPDAIGNLCSLERLDLSGNSFATLPSLTKLSKLYHLDLQQCKHMKYLPQLPSSIGFKPSNGLFRSYDVGLFVFNCPKLVEREVSTTIGFPWRQQLTQAFHEEKSITIGSVIPGSTLPEVFNNQYDWTGNYVSKSIDTSPVMHDERWIGAELCVIFTVPCYIRIPVGFYGNRQLVSDGSDHMWLSFQPRDRILDGLNLKCYIVLGEGPGVHVEVKTYGYRWVYKDDPTCKRKHLAIEQSEGSTLEKRGKDAAYSSQENTINWYFTRFARLLTLLANPCSQFRNDSSIHPSICRLRNLSEVDLLYCERLTNLPDFGGAINLERLSGRIGHKSCKAKSFTMYRTQFIDASTGLLKHLTHSDLAGCKNLESLLKTMLDLNSLEHLNLFVCLKLKSSDEPRDAKECDSCLFPSSPIFPSMVQLDLRLDLSGKATLPNLKKLSE 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03837 1055 Gene3D Ribonuclease Inhibitor 600 677 IPR032675 -
Pste1g03837 1055 PRINTS Disease resistance protein signature 113 127 - -
Pste1g03837 1055 PRINTS Disease resistance protein signature 53 68 - -
Pste1g03837 1055 PRINTS Disease resistance protein signature 457 473 - -
Pste1g03837 1055 PRINTS Disease resistance protein signature 212 226 - -
Pste1g03837 1055 Pfam NB-ARC domain 35 251 IPR002182 GO:0043531
Pste1g03837 1055 Gene3D Ribonuclease Inhibitor 874 1054 IPR032675 -
Pste1g03837 1055 Gene3D Ribonuclease Inhibitor 522 599 IPR032675 -
Pste1g03837 1055 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 605 IPR044974 GO:0006952
Pste1g03837 1055 SUPERFAMILY L domain-like 379 666 - -
Pste1g03837 1055 Gene3D - 11 170 IPR027417 -
Pste1g03837 1055 ProSiteProfiles Leucine-rich repeat profile. 627 648 IPR001611 GO:0005515
Pste1g03837 1055 Gene3D - 177 263 IPR042197 -
Pste1g03837 1055 SUPERFAMILY "Winged helix" DNA-binding domain 249 355 IPR036390 -
Pste1g03837 1055 SUPERFAMILY L domain-like 880 1010 - -
Pste1g03837 1055 Gene3D Ribonuclease Inhibitor 349 521 IPR032675 -
Pste1g03837 1055 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 273 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03837 Pste-Chr1 19219829 19229138 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03837 30 695 WRKY Transcription Factor Family AT5G45050 29.328 1.70e-62 230