Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03836 CATCTACTTGATAAGCTTACTGTTCTTTGAAACAACCATGACTTTAAGTGTGTTAATATTCATTGTTCTCCTTTGTTGTTGTTATCAAATTCACAATGTGGCCTCTGCTGGTTACTCACAGGCACTCACAAAATCTTTGTTGTATTTTGAGGGTCAACGTTCAGGGAAGTTACCTCCCAATCAGAGACTAAATTGGCGAGGTGATTCAGGACTCAAAGATGGCCAAGATATTGACCTTGTGGGTGGATATTACGACGCGGGAGACAATCTAAAACTAGGGTTTCCATTAGCATTCACGATGACGATGCTTTCATGGAGTACAATAGAGTTCAGGAAGGAACTGATGGAGAAAAAGGAGTTGAAAAATGCAGTGAATGCCATAAGATGGGGAACAGATTATCTGATGAAAGCTCACACAGAAGCGGAAGTGTTGTACGCAGAAATTGGCGATCCAGACTCAGACCATTCGTGTTGGGAAAGACCAGAGGACATGACCACACCCCGCACTTCTTTCAAGCTCGATGATAACAACCCGGGCTCTGATCTCGTCGCTGAAACCGCTGCTGCTCTCGCTGCTGCCTCCATTGTCTTTCAATCTCTCGATCACACATATTCATCTAAATTGTTACAACATGCAATTCAGTTGTTTGACTTTGCAAATAATCATCAAGGGAAATACTCTGATAGTATCACACCTGCAAGGGAAATATATTCTAGTAGCGGATTCCAGGACGAGTTAGTATGGGCAGCAGCATGGCTTCAACGTGCTACAAACATGGAGAAGTACCTTGATTTCCTTGCAAAAGCAGGTGACACTGGTGGCGTAAGAACAACGTTTAGTTGGGATGACAAGTTTGTAGGTGCACAAGTTCTTGTAGCTAAGCTTGTTATGGATGGTAAAGTGCAATCATCAGGGGTTTGGGGTCAATATAAGAGTCAGGCAGAGCAATTCATATGCTCTTGTGCACAAAAATCATACCAAAATGTGAAAAAAACACCAGGGGGTCTCTTGTGGTTTTTGCCATGGAACAATAATCAATATGTTGCTACTGCAACATTTATAATGTCTGTTTATTCCAATTATTTATCTTCAAAACAAGCATCCCTTCAGTGCACTGCTGCCAATGTTACTCCTGATGATCTCACCTCTGTTGTCCGCTCTCAGGTTGATTACATTTTGGGTTTTAACCCCAAGAAGATGAGTTACATGGTGGGATTTGGGACAAATTTTCCACAACAAATTCATCACAGAGCAGCATCAATTGTGTCAATAAAAAAGGACAAGACCCCAGTAGGATGTAAAGAGGGTTTTCAGGAGTGGTTCTATAAAAACGCACCAAACCCTAATTTGTTGGTAGGTGCAGTTGTGAGCCCAGATGGAAATGATAATTATGAAGATAGCAGAAGTGACTTTCAACTAGCTGAGCCAGCAACTGTTACTATTGCACCTTTAGTGGGTGTTCTTGCACATCTAGCT 1477 0.4191 MTLSVLIFIVLLCCCYQIHNVASAGYSQALTKSLLYFEGQRSGKLPPNQRLNWRGDSGLKDGQDIDLVGGYYDAGDNLKLGFPLAFTMTMLSWSTIEFRKELMEKKELKNAVNAIRWGTDYLMKAHTEAEVLYAEIGDPDSDHSCWERPEDMTTPRTSFKLDDNNPGSDLVAETAAALAAASIVFQSLDHTYSSKLLQHAIQLFDFANNHQGKYSDSITPAREIYSSSGFQDELVWAAAWLQRATNMEKYLDFLAKAGDTGGVRTTFSWDDKFVGAQVLVAKLVMDGKVQSSGVWGQYKSQAEQFICSCAQKSYQNVKKTPGGLLWFLPWNNNQYVATATFIMSVYSNYLSSKQASLQCTAANVTPDDLTSVVRSQVDYILGFNPKKMSYMVGFGTNFPQQIHHRAASIVSIKKDKTPVGCKEGFQEWFYKNAPNPNLLVGAVVSPDGNDNYEDSRSDFQLAEPATVTIAPLVGVLAHLA 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03836 480 PANTHER ENDO-1,4-BETA-GLUCANASE 7 479 - -
Pste1g03836 480 Gene3D - 23 480 IPR012341 GO:0005975
Pste1g03836 480 SUPERFAMILY Six-hairpin glycosidases 6 479 IPR008928 GO:0005975
Pste1g03836 480 Pfam Glycosyl hydrolase family 9 26 476 IPR001701 GO:0004553|GO:0005975
Pste1g03836 480 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 379 405 IPR018221 -
Pste1g03836 480 FunFam Endoglucanase 22 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03836 Pste-Chr1 19206776 19211710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03836 4 477 Glycoside Hydrolase AT2G44540 60.377 0.0 583