Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03831 CACAATTTTATTTACCTAGTCGTAATGGTAATGAACAAAAGGAGAAATCCTGAATAGTGAAGGTCACCGTGAATCCCTCCGGCACCGTCGGTCCACAACTTCCTAAAGCTCCGCTAATAGAAATGGATCTTCTGTGCAACGCTTATTGGAATGCCTCAGACGACGAAGAGCAACCAAAACGACAGCGAGTTTCACTCTCTTCCGCTACTAACCCACCAAAACGGCACCTTCCTTTACCTTCTTCTCCTCCTTTAGTCGAAACGCAGAATCCTATGCCCGGAAGATACGTTTCTAAACGACAACGCGCATTGATGGGTCCCACTCCTTCTCCTCTTCCCGTCCCCCTCCCTGTTCTATCTCCGTTCACGCTATATGGGACTATCTCTGATGCTGATATACACCATAATATTTTATCATTGTTGAAAAGTAAAGCAAAGGGTCATCAAAGCCCGAACCTGATATCTGAAAAGCTATCTGTGACACTATACGGGCATGCAAAAGCTGTCAATGCTATACATTGGTCATTAACTCATGCTCACCTCCTTGCATCTGCTGGGATGGATCATACGGTTTGCATATGGAATGTATGGAGCAGAAATCACAAGAAAGCATGTGTGCTAAACTTCCACAATGCAGCAGTCAAAGATGTGAAATGGTCTCAGCAAGGGCACTTTCTACTTTCTTGTGGATATGATTGCACATCAAGGTTGATCGATGTTGAAAAGGGATTGGAGAGTCAGGTTTTCAGAGAAGATCAAATTGTTGGGGTTACTAAGTTCCATCCAGATAATTCAAATCTCTTCCTTTCTGGAGGGTCAAAGGGCCATATCAAGCTATGGGATGTCAGAGCTGGCAAAGTAGTGCATAATTATAATCGAAATTTAGGTCCAATTCTGGATGTTGAGTTCACAATGAATGGGAAGCAATTCATTTCTTCTAGTGATGTATCTCAGAGTAATGTCAGTGAAAATGCCATTATTGTTTGGGATGTGTCAAGAGAGGTAGCATTGTCTAATCAGGTGTATGTGGAAGCTTATACATGTCCTTGCGTGAGGCGCCACCCATTTGATTCAATTTTTGTTGCGCAATCAAATGGGAATTATGTTGCAATCTTTACTACCACCCCGCCTTACAGACTCAACAAATATAAGCGATACGAGGGTCATGTGATCTCCGGGTTCCCAATCAAGTGCAATTTCAGCTTGGATGGCAAAAAACTCGCGTCTGGCTCTTCAGATGGTTCTATCTACCTTTATGATTATCAGTCCTCCAAAGTTGTGAAGAAAATCAAGGCCCATGACCAAGCATGCATAGATGTTGCCTTCCACCCTGTTATACCTAATGTTCTTGCTTCATGCTCTTGGGATGGAAGTATTTTGGTATTTGAGTAGTGTTACCTGTTATCATTGCCAATTACAGGGTAGTCTTTAATTTTCTTAAAGGCCATACAATTGGTTTCTACTAGAAAATGACATGCTAGAAGAGTGGAAAACTCTAGCTTTCTCTTAGTCTAGGCAGCTGTTTATAGTTTGTTAGATACTGTGTGAATAATTAAACCTTCTCCCACAAGTCAATGTTTGCTTAACTGTGT 1591 0.4192 MDLLCNAYWNASDDEEQPKRQRVSLSSATNPPKRHLPLPSSPPLVETQNPMPGRYVSKRQRALMGPTPSPLPVPLPVLSPFTLYGTISDADIHHNILSLLKSKAKGHQSPNLISEKLSVTLYGHAKAVNAIHWSLTHAHLLASAGMDHTVCIWNVWSRNHKKACVLNFHNAAVKDVKWSQQGHFLLSCGYDCTSRLIDVEKGLESQVFREDQIVGVTKFHPDNSNLFLSGGSKGHIKLWDVRAGKVVHNYNRNLGPILDVEFTMNGKQFISSSDVSQSNVSENAIIVWDVSREVALSNQVYVEAYTCPCVRRHPFDSIFVAQSNGNYVAIFTTTPPYRLNKYKRYEGHVISGFPIKCNFSLDGKKLASGSSDGSIYLYDYQSSKVVKKIKAHDQACIDVAFHPVIPNVLASCSWDGSILVFE 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03831 422 MobiDBLite consensus disorder prediction 9 50 - -
Pste1g03831 422 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 19 422 - -
Pste1g03831 422 ProSiteProfiles Trp-Asp (WD) repeats profile. 207 249 IPR001680 GO:0005515
Pste1g03831 422 Pfam WD domain, G-beta repeat 118 154 IPR001680 GO:0005515
Pste1g03831 422 Pfam WD domain, G-beta repeat 216 240 IPR001680 GO:0005515
Pste1g03831 422 Pfam WD domain, G-beta repeat 344 379 IPR001680 GO:0005515
Pste1g03831 422 Pfam WD domain, G-beta repeat 166 197 IPR001680 GO:0005515
Pste1g03831 422 CDD WD40 111 422 - -
Pste1g03831 422 Gene3D - 98 422 IPR015943 GO:0005515
Pste1g03831 422 ProSitePatterns Trp-Asp (WD) repeats signature. 141 155 IPR019775 -
Pste1g03831 422 SMART WD40_4 338 379 IPR001680 GO:0005515
Pste1g03831 422 SMART WD40_4 159 198 IPR001680 GO:0005515
Pste1g03831 422 SMART WD40_4 382 422 IPR001680 GO:0005515
Pste1g03831 422 SMART WD40_4 114 154 IPR001680 GO:0005515
Pste1g03831 422 SMART WD40_4 201 240 IPR001680 GO:0005515
Pste1g03831 422 SMART WD40_4 243 289 IPR001680 GO:0005515
Pste1g03831 422 ProSiteProfiles Trp-Asp (WD) repeats profile. 121 155 IPR001680 GO:0005515
Pste1g03831 422 ProSiteProfiles Trp-Asp (WD) repeats profile. 166 207 IPR001680 GO:0005515
Pste1g03831 422 SUPERFAMILY WD40 repeat-like 112 421 IPR036322 GO:0005515
Pste1g03831 422 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 121 155 - -
Pste1g03831 422 ProSiteProfiles Trp-Asp (WD) repeats profile. 359 388 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03831 120 292 U-box Gene Family AT2G33340 27.684 5.63e-11 62.4