Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03829 CAAAAAAGAGAGTACACAACACTAGAAGTGAATTAATCACAAAGAAATTCAAAACCCAAAAAAGGGTAGCTACTAAGAACTATCATGAGTTCCTATATTCCCAAACAGAACCAGTTTCTTCCCACAGAAGAAGAAAAATTTGATGATACTTACCTCTCAGCTTTAGTAGTATGCTTCAGCAGAGTTTTTCCTGCAATATTAAATGCTGCTGTTGATCTGGGTTTGTTTGATATCATAGCAAAGGCTGAGAAACCAAGTTTATCAGCTTCTGAAATTGCTTCTTTGCTTCCAAATCAACACCCTCAATTGGCTTATAGGCTTGAACGTTGCATATTGCCTGTGTTGGCAAGTTACTCTCTTCTCAACTGTTCCATTCAAACCAATGAAGATGATGTGACTGAGAGAGTTTATGCACTCTCTCCAATTGGTCAATACTTTGCTTATAATAACGATGGAGCTTCCTTGGGTCCCCTCTCAAGTTTGTTTCATCATGGATATTATCACATTTGGAAGGACGTACAGGATGCCATTATGGACCCTAACAACGACAACCATTTTGAGAAAGTCTATGGAATGCCATCCTATCAATATATGAAAAAAGATGAAGAACACAATCAACTTTTTAATAAAGCATTGGCTCAATCTGGCCCACCAGCGATGAAAATGCTCCTTAAATATTATAAAGGATTTGAGGGAGTATCAACACTGGTTGATGTAGGAGGTGGAGTAGGTGAGACCTTGAAACAAATTATCTTTGAGTACCCTTCAATAAAAGGAATTAACTTTGATTTGGCTCAAGTCTTAAAAGATGCACCCCCCTGTCCAGGGATAGAGCATGTTGAAGGGGACATGTTTGAAAGTGTTCCAAAAGGTGATGCCATTTTACTAAAGCTTGTATGTCATAATTGGCTAGATGAAGATTGTGTAAAATTTTTAAAGAATTGCCACAAAGCTTTGCCACAACATGGGAAAGTGATTATTATTGAATATATAATTCCAGAAGTTCCAGATTCAAGCAAAATTTCTGTGCAAACCTGCATTGCTGATAGTCTTATGTTTTTAGTAACAAAGGGAAAAGAAAGAACTGAGAAACAATTTGAGAGCTTGTGCAAGAGTTCTGGATTTTCTAGATGTCATGTTGCTGGAAGAGGTTTACCTTCGGTTCTGTCAGTCATTGAATTTTACAAATAAAATAATGTACCAAATTAAATAAAAGGACATTGTGGAAGAAAAAATAATATACCAAATAAAAGGACAATGTCTCTAATCTAGGAAGAATCTGTTTCATAGATGATGATGTTGTCTTAGAGCTTCCACTTTGATAATCTATTAATAGTTTTGATGAATTCCACTCTTGTTTTATAATTTGATTTAAGGTTATTTATACTTTTATGTTCAATAATAATCATTGAGTCTCCCTGAGTATCTATCATCGGG 1437 0.3542 MSSYIPKQNQFLPTEEEKFDDTYLSALVVCFSRVFPAILNAAVDLGLFDIIAKAEKPSLSASEIASLLPNQHPQLAYRLERCILPVLASYSLLNCSIQTNEDDVTERVYALSPIGQYFAYNNDGASLGPLSSLFHHGYYHIWKDVQDAIMDPNNDNHFEKVYGMPSYQYMKKDEEHNQLFNKALAQSGPPAMKMLLKYYKGFEGVSTLVDVGGGVGETLKQIIFEYPSIKGINFDLAQVLKDAPPCPGIEHVEGDMFESVPKGDAILLKLVCHNWLDEDCVKFLKNCHKALPQHGKVIIIEYIIPEVPDSSKISVQTCIADSLMFLVTKGKERTEKQFESLCKSSGFSRCHVAGRGLPSVLSVIEFYK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03829 368 PANTHER O-METHYLTRANSFERASE 32 366 IPR016461 GO:0008168
Pste1g03829 368 SUPERFAMILY "Winged helix" DNA-binding domain 17 121 IPR036390 -
Pste1g03829 368 Gene3D - 34 195 IPR036388 -
Pste1g03829 368 Pfam Dimerisation domain 38 86 IPR012967 GO:0046983
Pste1g03829 368 CDD AdoMet_MTases 207 304 - -
Pste1g03829 368 FunFam Caffeic acid 3-O-methyltransferase 3 118 - -
Pste1g03829 368 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 27 368 IPR016461 GO:0008168
Pste1g03829 368 FunFam Uncharacterized protein 119 368 - -
Pste1g03829 368 Pfam O-methyltransferase domain 142 348 IPR001077 GO:0008171
Pste1g03829 368 PIRSF O-mtase 4 368 IPR016461 GO:0008168
Pste1g03829 368 Gene3D Vaccinia Virus protein VP39 177 352 IPR029063 -
Pste1g03829 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 134 357 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03829 Pste-Chr1 19090663 19093268 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03829 8 352 Monolignol Biosynthesis Gene Families AT5G54160 45.584 6.42e-101 301