Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03827 ATGGATTCCATTTCCAAAAAGAGTCAAGTTCCCACTGAAGAGGTGGATGATGTTTACCTCTCTGCTATGTTACTTTGTTTTAGTCGTGTCCTTCCTGCAGTTCTAAATGCTGCTGTTGATATCAATTTGTTTGATATCATAGCAAAGGCAGAAAGTTCATATGATTCAAGTTTATCTGCCTCTGAAATTGCTTCTTTGCCTCCAAATCAACACCCCCAATTGGCTAATAGGCTTGAACGCATGTTGCCATTGCTAGCCAGTTATTCTCTTTTTAATTGTTCCATTCGTACCAATGAAGATGGTAAGAGAGAAAGGGTTTATTCTCTCTCACCCGTTGGTCGATACTTTGCATTTGATAAGGATGATGGAAGCTCCTTTGCTCCTCTCTCTTCTTTAATACACCGTGGATATGATGACCTTTGGAAGGATGTGAAGGATGCTATAGTTGATCCTAACAACAATAGCCATTTTGAAAATGTTTATGGAATGCCATCATTTCAATATATGGAGAGTAAAAAAGAGCTGAATTACATGTTTTTTAAAGCAATGGCTCACGCAGGCCCAATAGAACTGAAAAGGGTACTCAAATCATATAAAGGTTTTGAGGGAGTGTCAACACTAGTTGATGTTGGAGGTGGACTAGGAGAGAACATAAAAAATATTGTCTCTGCATATCCTTCAATTAAAGGAATTAATTTTGATTTGCCACAGACGATTCAAGATGCACCACCTCATCCAGATTCTCTACAAGATCGTCACTATCTTCATAGTCACCACTATCGTTGGTACCGTGTTTTCTTATTTTTT 807 0.3817 MDSISKKSQVPTEEVDDVYLSAMLLCFSRVLPAVLNAAVDINLFDIIAKAESSYDSSLSASEIASLPPNQHPQLANRLERMLPLLASYSLFNCSIRTNEDGKRERVYSLSPVGRYFAFDKDDGSSFAPLSSLIHRGYDDLWKDVKDAIVDPNNNSHFENVYGMPSFQYMESKKELNYMFFKAMAHAGPIELKRVLKSYKGFEGVSTLVDVGGGLGENIKNIVSAYPSIKGINFDLPQTIQDAPPHPDSLQDRHYLHSHHYRWYRVFLFF 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03827 269 SUPERFAMILY "Winged helix" DNA-binding domain 14 119 IPR036390 -
Pste1g03827 269 Gene3D Vaccinia Virus protein VP39 119 260 IPR029063 -
Pste1g03827 269 FunFam Caffeic acid 3-O-methyltransferase 3 116 - -
Pste1g03827 269 PANTHER O-METHYLTRANSFERASE 23 249 IPR016461 GO:0008168
Pste1g03827 269 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 269 IPR016461 GO:0008168
Pste1g03827 269 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 133 247 IPR029063 -
Pste1g03827 269 Pfam O-methyltransferase domain 141 246 IPR001077 GO:0008171
Pste1g03827 269 Gene3D - 2 116 IPR036388 -
Pste1g03827 269 Pfam Dimerisation domain 34 86 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03827 Pste-Chr1 19075119 19076196 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03827 1 246 Monolignol Biosynthesis Gene Families AT5G54160 40.726 9.58e-55 179