Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03826 CCCCCGGAAGATGCTTACCTCTCCGCTGTGTTACTTTGTTTTAGTCGTGTCCTTCCTGCAGTTCTAAATGCTGCTATTGATATCAATTTGTTTGATATCATAGCAAAGGCAAAAAGTTCACGTGATTCAAGTTTATCTGCCTCTGAAATTGCTTCTTTGTTTCCAAATCAACACCCCAAATTGGCTAATAGGCTTGAACGCATGTTGCCATTGCTAGCCAGTTATTCTCTTTTTAATTGTTCCATTCGTACCAATGAAGATGGTGAGAGAGAAAGGGTTTATTCTCTCTCACCCGTTGGTCAATACTTTGCATTTGATGAGGATGATGGAACCTCTTTGGCTCCTCTCTCTTCTTTAATACATCGTGGATATGAGGACCTTTGGAAGGATGTGAAGGATGCTATTGTAGATCCTAACAACAATAACCATTTTGAAAATGTTTATGGAATGCCATCATTTCAATATATGGAGAGGCTGAATCACATGTTTCTTAAAGCAATGGCTCACGCAGGTCCAATAGAACTGAAAAGGGTACTCAAATCATATAAAGGTTTTAAGGGAGTGTCAACACTGGTTGATGTTGGAGGTGGAGTAGGAGAAAACATAAAACAGATTGTCTCTGCATATCCTTCAATTAAAGGAATTAATTTTGATTTGCCTCAAATGATTCAAGGTGCACCACCGCATCCAGGTATAGAGCATATTGGAGGAGACATGTTTGAAAGTGTGCCAAATGGTGATGCCATTTTACTAAAGTTTGTGTGTCATAATTGGCCCGATGAAGATTGTATAAAGTTCTTAAGAAACTGTCGCAAAGCCTTGCCACAACATGGAAAAGTGATCGTTTTGGACTATGTAATTCCAGAGGTCCCAAATTCAAGTTTTATGTCTAGGAATACTTGTGCAGTCGACAATGTCATGTTTTTAGTACATAACGGAAAGGAAAGAACTGAGAGTGAATTTGAAAACTTATGTAAGAGTTCTGGTTTTTCCAAGTTTCATGTAGCAACTAGTGACATCCTAGCTATGATAGGAGATGCCTACATCATCCTTTATGGTGCTGCAAGACCAACTCATCAATCACCTCACATTCATCCCACAATTCCAACCAAACCC 1116 0.3916 PPEDAYLSAVLLCFSRVLPAVLNAAIDINLFDIIAKAKSSRDSSLSASEIASLFPNQHPKLANRLERMLPLLASYSLFNCSIRTNEDGERERVYSLSPVGQYFAFDEDDGTSLAPLSSLIHRGYEDLWKDVKDAIVDPNNNNHFENVYGMPSFQYMERLNHMFLKAMAHAGPIELKRVLKSYKGFKGVSTLVDVGGGVGENIKQIVSAYPSIKGINFDLPQMIQGAPPHPGIEHIGGDMFESVPNGDAILLKFVCHNWPDEDCIKFLRNCRKALPQHGKVIVLDYVIPEVPNSSFMSRNTCAVDNVMFLVHNGKERTESEFENLCKSSGFSKFHVATSDILAMIGDAYIILYGAARPTHQSPHIHPTIPTKP 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03826 372 CDD AdoMet_MTases 190 287 - -
Pste1g03826 372 PIRSF O-mtase 2 348 IPR016461 GO:0008168
Pste1g03826 372 Pfam O-methyltransferase domain 128 331 IPR001077 GO:0008171
Pste1g03826 372 SUPERFAMILY "Winged helix" DNA-binding domain 3 107 IPR036390 -
Pste1g03826 372 PANTHER O-METHYLTRANSFERASE 14 330 IPR016461 GO:0008168
Pste1g03826 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 10 349 IPR016461 GO:0008168
Pste1g03826 372 Pfam Dimerisation domain 21 73 IPR012967 GO:0046983
Pste1g03826 372 Gene3D Vaccinia Virus protein VP39 106 346 IPR029063 -
Pste1g03826 372 FunFam Caffeic acid 3-O-methyltransferase 2 103 - -
Pste1g03826 372 FunFam Uncharacterized protein 105 350 - -
Pste1g03826 372 Gene3D - 2 103 IPR036388 -
Pste1g03826 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 336 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03826 Pste-Chr1 19035314 19037353 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03826 3 335 Monolignol Biosynthesis Gene Families AT5G54160 46.018 8.58e-101 301