Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03825 CTTCAATTCACTCAAAGTGAAAGCTTGTGTCTATAAGCTTTGAAATCAACCTTGATTTGGACTCACTCATCCTTTAATCAAACACGCTCAAAAGACTATGATGAATTAATTACCAATCTCGCGTTTATGAAAAAATTAATCTATATACTATAACGGAGCGCCACAAAAGCTGCACTCGATGGACATGGTTGCATTCATGATTATGGTTGCTTCCATACTTATTCCCTCTCTCAGATTTTCCATAGCAAATGATTCTGTTCAAGTGCCTCAGTCCATGAGTGATGGGGATACCTTGGTGTCAAAAGGTGGAAAGTTTGTACTTGGGTTTTTCGGCCCAGGTAGTTCCCACAAACGTTATCTGGGCATTTGGTACAAGAATGTCCCTATTCAAACTCTTGTTTGGGTTGCTAATAGAGCCAACCCCATCAATGATTCCTCGGGCATCTTGACAGTGAACAGCACAGGCAATCTTGTTCTCACCCAAAATGGATCTCTTGTTTGGCACACCAACTCTCAAAAACAAGCACAGGATCCTATGGCAGTGCTCTTGGACAATGGCAATCTTGTGATAAGAAATGAGAGAGAAACAAACCCGGAAGAGTACTTGTGGCAAAGCTTTGACTATCCATCCGATACACTCTTGCCAGGCATGAAGTTGGGATTGGACCTCAGAACGGGTCTGGAACGAAGATATACTGCTTGGAAGAGTCAAGATGATCCATCCCCAGGAGACGTTTATAGGGTTTTAAAACACTATAACTATCCTGATATTTATACAATGAGGGGAACACAAAAGTTGTCCCGGTTTGGACCTTGGAATGGCTTATATTTTAGTGGAATGCCAGAACTACTGAATAACACCATCTTTGGCTTGAGTTTTGTCAGCAATAAGGATGAAATTTACTACACCTATAGCCAGGTAAGCAATTCTGTTATCACCAGAACGGTAACAAACCAAACAGGTAGAGTTTATCGCTATGCATGGGCAGAGGGTAATCAAAATTGGAAGGTATACATTTCAACACCTGCACACTTTTGTGACTCTTATGGTCTCTGTGGAGCCTATGGGAGTTGCGTGACTACAAAGACACAAGTGTGTCAATGTTTGAAAGGGTTTCATCCAAAGTCACCACAAGCATGGGACTCATCGGATTGGTCTCAAGGATGTGTCCGCAATACACCATTAAGTTGCAAAGATAAACTCACAGACGGATTTATCAAATTTAAAGGCCTAAAAGTACCAGATACTACACATACTTGGTTGGATGAGAGTATTGGTCTAGAGGAATGCAGTGTAAAGTGTTTGAATAATTGTTCTTGCATGGCCTATACTAATTCAGACATACGAGGTGAAGGTAACGGTTGTGTCATGTGGTTGGGAGATCTCATTGACATGAGGCAATTTGAAACTGGCGGGCAAGATCTATATATCAGGATGTCTGCTTCAGAGTTAGGACACAAGAAGAACACGCTAAAGATAGTTGCTTCCACCATCGCAGCAATTTGTAGCTTTATGTTATTATTATGTTATTATTTTATCAGCAGAATCAGGAGGAACAATGCTGAGAAAGACAACAGTGAGAAGGATGACATTAACTTACCAACGTTTGATTTTTCATCTATCTCTAATGCCACAAATTACTTTTCAGAAAAAAAAATATTGGGACAAGGTGGTTTCGGACCAGTTTACAAGGGCATGTTACCAGATGGACAAGAGATTGCAGTTAAGAGGCTTTCTGAAACTTCTAGACAAGGTTTGGACGAGTTCAAAAATGAAGTCAAGTTAATTGCAAAACTTCAACACCGTAATCTTGTAAAGCTTCTTGGTTGTTCTATTCAACAAGATGAGAAGTTGTTAATTTATGAATTTATGCCCAATAGAAGCTTGGACTACTTTATTTTTGATTCGACTAGGCGTAAATTATTAGATTGGACTAAGCGATTTGAAATTATTAATGGAATTGCTCGAGGACTTCTCTATCTTCATCAAGACTCTAGGCTAAAGATCATTCATAGGGATCTCAAAACTAGCAATGTTCTTCTTGATAGCAATATGAATCCAAAAATATCAGATTTTGGTATGGCTAGGATATTTGTGCTAGATCAAGATGAAGCAAATACAAAGAGAATAATGGGAACTTACGGTTATATGCCTCCTGAATATGCCGTACATGGATCTTTCTCAGTCAAATCGGATGTCTTCAGTTTTGGTGTAATTGTGTTGGAGACAATAAGTGGGAGAAAGATTAGGGGATTTTGTGACCCTTTTCATCACCTAAATCTTCTTGGACATGCATGGAGACTATGGATTGAAAAAAGGCCAATAGAATTTATGGATGACTTATTGGACAATAATGCTGCTCTATCTGAAATAGTAAGATATATTCATATTGGTTTGTTATGTGTACAACAAAGACCAGAGGATAGACCAAATATATCATCAGTAGTTCTAATGTTGAATGGTGAGAAGCTATTGCCCGAACCAAGTCAGCCAGGGTTCTACTCAGGAAAAGGTCATCCAACCATAACAGAAAGCTCTCCAGGAAATATTGCTGCATATTCCTTAAATGAAATTTCTAACTCATTGTTGGAGGCAAGATAAAAAAGAAACTAAACAAGAGATGATATGGAAAATAAAAAAGTCTCTTATCTCCAACCTTAAACTACTACTGTTGTACTATAAGCAAGGAAAAAATACTAGTATCGATTGGATTTGATTTTTATTCTAATTAAGCTCATTAGGTTCTTTAAATTAAGAGAAACATCAAAC 2770 0.3827 MDMVAFMIMVASILIPSLRFSIANDSVQVPQSMSDGDTLVSKGGKFVLGFFGPGSSHKRYLGIWYKNVPIQTLVWVANRANPINDSSGILTVNSTGNLVLTQNGSLVWHTNSQKQAQDPMAVLLDNGNLVIRNERETNPEEYLWQSFDYPSDTLLPGMKLGLDLRTGLERRYTAWKSQDDPSPGDVYRVLKHYNYPDIYTMRGTQKLSRFGPWNGLYFSGMPELLNNTIFGLSFVSNKDEIYYTYSQVSNSVITRTVTNQTGRVYRYAWAEGNQNWKVYISTPAHFCDSYGLCGAYGSCVTTKTQVCQCLKGFHPKSPQAWDSSDWSQGCVRNTPLSCKDKLTDGFIKFKGLKVPDTTHTWLDESIGLEECSVKCLNNCSCMAYTNSDIRGEGNGCVMWLGDLIDMRQFETGGQDLYIRMSASELGHKKNTLKIVASTIAAICSFMLLLCYYFISRIRRNNAEKDNSEKDDINLPTFDFSSISNATNYFSEKKILGQGGFGPVYKGMLPDGQEIAVKRLSETSRQGLDEFKNEVKLIAKLQHRNLVKLLGCSIQQDEKLLIYEFMPNRSLDYFIFDSTRRKLLDWTKRFEIINGIARGLLYLHQDSRLKIIHRDLKTSNVLLDSNMNPKISDFGMARIFVLDQDEANTKRIMGTYGYMPPEYAVHGSFSVKSDVFSFGVIVLETISGRKIRGFCDPFHHLNLLGHAWRLWIEKRPIEFMDDLLDNNAALSEIVRYIHIGLLCVQQRPEDRPNISSVVLMLNGEKLLPEPSQPGFYSGKGHPTITESSPGNIAAYSLNEISNSLLEAR 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03825 807 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 747 - -
Pste1g03825 807 SMART serkin_6 489 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03825 807 CDD PAN_AP_plant 334 419 - -
Pste1g03825 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 454 564 - -
Pste1g03825 807 Pfam PAN-like domain 340 406 IPR003609 -
Pste1g03825 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 565 768 - -
Pste1g03825 807 Gene3D Phosphorylase Kinase; domain 1 452 564 - -
Pste1g03825 807 Pfam D-mannose binding lectin 72 176 IPR001480 -
Pste1g03825 807 PIRSF SRK 1 807 IPR024171 GO:0004674
Pste1g03825 807 SMART blect_4 30 150 IPR001480 -
Pste1g03825 807 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Pste1g03825 807 CDD B_lectin 31 150 IPR001480 -
Pste1g03825 807 SMART ntp_6 341 420 IPR003609 -
Pste1g03825 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Pste1g03825 807 ProSiteProfiles Protein kinase domain profile. 489 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03825 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Pste1g03825 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 147 - -
Pste1g03825 807 Gene3D - 20 147 IPR036426 -
Pste1g03825 807 SUPERFAMILY Protein kinase-like (PK-like) 471 760 IPR011009 -
Pste1g03825 807 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Pste1g03825 807 CDD STKc_IRAK 495 762 - -
Pste1g03825 807 ProSiteProfiles PAN/Apple domain profile. 338 421 IPR003609 -
Pste1g03825 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 337 420 - -
Pste1g03825 807 Pfam Protein tyrosine and serine/threonine kinase 492 757 IPR001245 GO:0004672|GO:0006468
Pste1g03825 807 Gene3D Transferase(Phosphotransferase) domain 1 565 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03825 Pste-Chr1 19028005 19031707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03825 423 774 Receptor kinase-like Gene Family AT4G05200 53.039 4.94e-126 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03825 PK_Tyr_Ser-Thr 8.6e-44 CL0016