Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03821 AATGGAAAAATCAAACATACGTACGTACGCGTTAGGCAAATAATGGAGCACCGTGACTCAATGCAGTTTCTTGCTTTCATGATAATGGTATGCTACATACTTGTTTCCTCTCTCAAAACTTCAGTAGCAAATGATTCCATCAGCATGCTCCAGTCTATGAATGATGGCGAGACCTTGGTAATTCCTAGAAACGTTACCTGGGAATTTGGTACAAGAATATCCCAATTAAAACAGTTGTTTGGGTTGGCCAACCCCATCAATGATTCCTCAGGCATCTTAAGATTCAACAGCACAGGCAATCTTGTTCTCTCCCAAAATGGGTTTGTTGTTTGGTACACCAACTCTCACAAAGAAGCACAGAAATCAGTGGCAGTGCTCTTGGACGTTGGCAATCTTGTGATAAGAAATGAGGGAGAAACAAACCCAGAAGGCTTTGACTATCCATCTGATACACTCTTGCCAGGTATGAAGTTGGGTTGGGACCTAAGAACTGGTCTGGAATGGAAACTAACATCTTGGAAGAGTCCAGATGATCCTTCCCCAGGTGAGGTTGATTTGGTTTTGAAACTTTATCCTGAGATTTATATGATGAGCGGAAGAAAAAAGTTATTCCGGTGTGGACCCTGGAATGGCTTATTTTTTAGTGGAATACCAGACCTACAGAATAACACTATTTATAGCTTAATTTTGTCCGCAATAAGGATGAGATTTACTGCACCTATAGCCTTGAAAATAACGCAATCAACGTCAGAGTTCTGTGACACTAATGGCCTCTGTGGACCCTATGGGAATTGCTTAAGTACTCGATCACAATTCTGTCAATGCTTAAAAGGTTTCAGTCCAAAGTCACCACAATATTGGAGCTCATCGGATTGGTCTCAAGGATGCGTTCACAAAAAACCATTAAGCTGCAAAGAGAAACTCACAGATGGGTTTGTCAGATTTGAAGGCCTCAAAGTTCTGGAAACTACACGTACTTGGTTGAATGAGAGTATTGGTCTAGAGGAATGCAAAGTGAAGTGCTTGAAGAATTGTTCTTGTATGGCCTATGCTAATTCAGACATAAGAGGTGAGGGTAGTGGTTGTGTTATGTGGTTTGGAGATCTCATTGACATCAAACAGTTTCAAACTGGTGGACAAGATCTCTATATCAGGATGGCTGCTTCAGAGTTAGAAGCATTAAATAGGCAAAAGAAGAAGAAGCCAGCACTTGTTGCTTCCACCAGTGCTACAATTTTTGTGGTTCTGATAATAAGTTCTTATTGCATCTACAGAAGTCAGAGAGCTTATTGGAAGGACAAGAGTGAGGATAACATTGATTTACCAACATTTGATTTTTCATCCATCTACAATGCTACGAATCACTTTTCACAAGGTAACAAATTGGGACAAGGAGGCTTTGGAATAGTGTACAAGGGTATGTTGTTAGATGGACAAGAAATTGCAGTTAAGAGGCTGTATAAAACTTCTGGACAAGGTTTGGACGAGTTAAAAAATGAAGTAGTATTGATTGCAAAAGTTGAACACCATAATCTTGTAACGCTTCTTGGTTGTTCTATTCAGCAATATGAGAAGTTGTTGATTTATGAATTCATGCCAAATAGAAGCTTGGATTACTTTATATTTGATTCAACAAGACGAGCATTATTAAGTTGGGGGAAGCGATTTGAAATTATTAGTGGAATTGCTCGAGGACTTCTTTATCTACATCAAGACTCTAGACTAAAGATAATTCATAGGGATCTCAAAACTAGTAACGTTCTTCTTGATAGTAATATGAACCCAAAAATATTTGATTTTGGTATAGCTAGGACATTTGGACAAGATCAAGATGAAGCAAAGACAAATAAAATCATGGGAACATATGGTTATATGTCTCTTGAATATGCCATGTATGGATATTTTTCAACGAAGTCAAATGTCTATAGCTTTGGTGTGATTGTTCTAGAGATAATTAGTGGGAGGAAGATCAGTCGATTTTGTAACTCGCATTGTCATCTAAATCTTCTCGAACATTGGACCAGTTTAGCTAATGCATATGAAATATTAAGACATATTCATATTGGTTTATTATGCGTACAAGAAAGACGAGAGGATAGGCCAAACATGTCATCAATAATTTTAATGTTGAATGGTGAAAAGTTATTGCCTGAGCCAAGTCAACCTGGGTTTTACACAAAAAATGATCATCCATCCAAGACAAATTCTTCACCAAGAAACTTTAAAGCACTCTCCCTTAGTGATATGTCTAACTCATCATTGGAGGCAAGATAA 2274 0.3808 NGKIKHTYVRVRQIMEHRDSMQFLAFMIMVCYILVSSLKTSVANDSISMLQSMNDGETLVIPRNVTWEFGTRISQLKQLFGLANPINDSSGILRFNSTGNLVLSQNGFVVWYTNSHKEAQKSVAVLLDVGNLVIRNEGETNPEGFDYPSDTLLPGMKLGWDLRTGLEWKLTSWKSPDDPSPGEVDLVLKLYPEIYMMSGRKKLFRCGPWNGLFFSGIPDLQNNTIYSLILSAIRMRFTAPIALKITQSTSEFCDTNGLCGPYGNCLSTRSQFCQCLKGFSPKSPQYWSSSDWSQGCVHKKPLSCKEKLTDGFVRFEGLKVLETTRTWLNESIGLEECKVKCLKNCSCMAYANSDIRGEGSGCVMWFGDLIDIKQFQTGGQDLYIRMAASELEALNRQKKKKPALVASTSATIFVVLIISSYCIYRSQRAYWKDKSEDNIDLPTFDFSSIYNATNHFSQGNKLGQGGFGIVYKGMLLDGQEIAVKRLYKTSGQGLDELKNEVVLIAKVEHHNLVTLLGCSIQQYEKLLIYEFMPNRSLDYFIFDSTRRALLSWGKRFEIISGIARGLLYLHQDSRLKIIHRDLKTSNVLLDSNMNPKIFDFGIARTFGQDQDEAKTNKIMGTYGYMSLEYAMYGYFSTKSNVYSFGVIVLEIISGRKISRFCNSHCHLNLLEHWTSLANAYEILRHIHIGLLCVQERREDRPNMSSIILMLNGEKLLPEPSQPGFYTKNDHPSKTNSSPRNFKALSLSDMSNSSLEAR 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03821 757 Gene3D Phosphorylase Kinase; domain 1 430 531 - -
Pste1g03821 757 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 303 386 - -
Pste1g03821 757 MobiDBLite consensus disorder prediction 725 757 - -
Pste1g03821 757 CDD PAN_AP_plant 301 387 - -
Pste1g03821 757 SMART serkin_6 456 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03821 757 Pfam PAN-like domain 304 372 IPR003609 -
Pste1g03821 757 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 179 IPR036426 -
Pste1g03821 757 ProSiteProfiles Protein kinase domain profile. 456 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03821 757 SMART blect_4 50 148 IPR001480 -
Pste1g03821 757 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 422 531 - -
Pste1g03821 757 SMART ntp_6 307 386 IPR003609 -
Pste1g03821 757 Pfam D-mannose binding lectin 84 174 IPR001480 -
Pste1g03821 757 Pfam Protein tyrosine and serine/threonine kinase 458 708 IPR001245 GO:0004672|GO:0006468
Pste1g03821 757 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Pste1g03821 757 SUPERFAMILY Protein kinase-like (PK-like) 441 732 IPR011009 -
Pste1g03821 757 ProSiteProfiles PAN/Apple domain profile. 304 387 IPR003609 -
Pste1g03821 757 MobiDBLite consensus disorder prediction 719 757 - -
Pste1g03821 757 ProSitePatterns Protein kinases ATP-binding region signature. 462 484 IPR017441 GO:0005524
Pste1g03821 757 PIRSF SRK 17 240 IPR024171 GO:0004674
Pste1g03821 757 PIRSF SRK 233 757 IPR024171 GO:0004674
Pste1g03821 757 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Pste1g03821 757 Gene3D - 39 142 IPR036426 -
Pste1g03821 757 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 29 700 - -
Pste1g03821 757 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 532 718 - -
Pste1g03821 757 Gene3D Transferase(Phosphotransferase) domain 1 532 717 - -
Pste1g03821 757 Pfam S-locus glycoprotein domain 247 283 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03821 Pste-Chr1 19006098 19010099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03821 403 728 Receptor kinase-like Gene Family AT4G23190 49.435 3.10e-109 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03821 PK_Tyr_Ser-Thr 9.6e-43 CL0016