Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03820 CTGTGACTCAATGGATATGCGTTCTTTCATTATTATTTTTGCATGCACACTTATTCCCTTCAAAATTTCCGTAGCTAATGATTCTATCCTACTCCAGCCCCTAAGAGATGGGAAGACCTTGGTGTCGAAAGGTGGAAAGTTTGAACTTGGGTTTTTCAGCCCAGGTAGTTCCCACAAACGTTATCTGGGCATTTGGTACAAGAATGTCCCTATTCCAACAGTTGTTTGGGTTGCTAACAGGGCCAACCCTATCAATGATTCCTCAGCCATCTTAACACTGAACAGCACAGGTAATCTTGTTCTCACCCAAAATGGTTCTCTTGTTTGGTCCACAACCAACGCCTCTCAGAAACAAGCACAAAATCCAGTGGCTGAGCTCTTGGATAGTGGAAATCTTGTGATAAGAAATGAGGGAGAAACAAACCCAGAAGAGTACTTGTGGCAAAGCTTTGACTATCCGTGTGATACCCTCTTGCCGGGGATGAAGTTGGGATGGAACATCAAAACTGGTCTTCAACGGACATATACTGCTTGGAAGAGTCCAGATGATCCATCCCCAGGACAAGTTTATAGGATTTTACAACAGTACAATTATCCTGAGATTTATATGATGAAGGGAACACAAAAGTTGTTCAGGTATGGACCTTGGAATGGCCTATATTTCAGTGGAATGCCAGAACTATTGAATAACTCCATCTTTGACTTGAGTTTTATGACCACTAAGGATGACGTTTACTACACCTATAGCCTCGTAAACAATTTAGTCATTACCAGAACGGTAACAAACGAAACAGGTACAATTTATCGTTACGTATGGCTGGAGGATAAGAAAGAATGGACAATATATAGATACTACCCGAGAGAGAATTGTGATCATTATGACCTCTGTGGACCCTATGGGAACTGCGTCAGGACTCAATCACAAGCCTGCCAATGTTTAAAAGGTTTCAGTCCAAAGTCACCACAAAACTGGAACTCATCGGATTGGAATGGAGGATGTGTCCGCAATAAACCGTTAAGTTGCAACGGTACAGACAAAGATGGGTTTGCCAATTTCAAAGGCATGAAAGTTCCAGATACTACACACACTTGGTTGGATGAGAGTATGGGTCTCGAAGAATGCAGAGAAAAATGTTTGAATAATTGTTCTTGTATGGCATATACTAATTCAGACATAAGAGGTAAGGGTAGTGGTTGTGTCATGTGGTTTGGAGATCTCATTGACATGAAGCAGATTGAAAGTGGTGGGCAAGCTCTATATATCAGGATGGCTGCTTCAGATTCAGATCCTGTATCAAGACACAAGAAGAACACACCGACGATAGTTGCTTCAACAATTAGTGCAATTTGTGGGGTTCTTTTTCTATGTACTTATCTTATTTTCAGAATCCGAAGGAAAAGTGATGGCCTTCCTGAGTTTGATTTGGACATCCAATTGTTTGATCTATCGACAATTGCAACTGCCACTAATAACTTTTCCATAGAAAATAGAATTGGAGAAGGTGGTTTTGGGCCTGTCTACAAGGGAATATTAACTAACAGACAAGAGATTGCTGTAAAGACTCTGTCAAGGAGCTCCTGGCAAGGAGTGATCGAGTTCATAAATGAAGTAAAATTGATTGCAAAACTTCAACATCGAAATCTTGTCAAATTGCTTGGTTGTTGCATTGAAGGACAAGAACGAATGTTGATTTATGAATACATGGCAAATGGAAGCTTAGATTTATTCATTTTTGATGATAAAAAAAGTAAATTGTTAGAGTGGCCTCAACGTTTCAACATAATTTGTGGAATTGCAAGGGGACTTATGTATCTTCATCAAGATTCCCGATTGACGATTATTCACAGAGATCTCAAAGCAAGTAATGTCCTGCTAGATGAAAATCTCAGTCCAAAAATTTCAGATTTTGGAGTAGTTAGAATTTTTGGGGGAGACCAATTTGAAGGAAATACAAGTAGAGTGGTTGGGACTTATGGATATATGGCTCCAGAATACGCTGTTGATGGGTTATTTTCTGTAAAATCCGATGTCTTTAGCTTTGGAATTTTAGTATTGGAGATTGTATGCGGGAAGAAAAATAAAGGACTTTATCACACAAATAAAAACCTTAACCTTGTTGCTCATGCATGGACATTATGGAAAGCAGGCAAGGCGTTAGATTTGATTGACTCATACATGAAGAAGTCGTCCTGTGTTATACCAGAATTACTACGCTGTCTCCATGTTAGTCTTTTGTGTGTGCAACAATACCCAAATGATAGGCCTCCAATGAAGTCTGTGATTCTGATGTTGGAGGGCCACATGGAATTGGATGAGCCTAAAGAACATGGTTTCATTATGAGAAATGTTGTCGGTGAAGAAGACTTACAATCAAATCTGAAAGACATAAGTTCAACCAACAATGTGACAATTACCATGTTAGAAGGTCGA 2431 0.3957 MDMRSFIIIFACTLIPFKISVANDSILLQPLRDGKTLVSKGGKFELGFFSPGSSHKRYLGIWYKNVPIPTVVWVANRANPINDSSAILTLNSTGNLVLTQNGSLVWSTTNASQKQAQNPVAELLDSGNLVIRNEGETNPEEYLWQSFDYPCDTLLPGMKLGWNIKTGLQRTYTAWKSPDDPSPGQVYRILQQYNYPEIYMMKGTQKLFRYGPWNGLYFSGMPELLNNSIFDLSFMTTKDDVYYTYSLVNNLVITRTVTNETGTIYRYVWLEDKKEWTIYRYYPRENCDHYDLCGPYGNCVRTQSQACQCLKGFSPKSPQNWNSSDWNGGCVRNKPLSCNGTDKDGFANFKGMKVPDTTHTWLDESMGLEECREKCLNNCSCMAYTNSDIRGKGSGCVMWFGDLIDMKQIESGGQALYIRMAASDSDPVSRHKKNTPTIVASTISAICGVLFLCTYLIFRIRRKSDGLPEFDLDIQLFDLSTIATATNNFSIENRIGEGGFGPVYKGILTNRQEIAVKTLSRSSWQGVIEFINEVKLIAKLQHRNLVKLLGCCIEGQERMLIYEYMANGSLDLFIFDDKKSKLLEWPQRFNIICGIARGLMYLHQDSRLTIIHRDLKASNVLLDENLSPKISDFGVVRIFGGDQFEGNTSRVVGTYGYMAPEYAVDGLFSVKSDVFSFGILVLEIVCGKKNKGLYHTNKNLNLVAHAWTLWKAGKALDLIDSYMKKSSCVIPELLRCLHVSLLCVQQYPNDRPPMKSVILMLEGHMELDEPKEHGFIMRNVVGEEDLQSNLKDISSTNNVTITMLEGR 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03820 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 147 - -
Pste1g03820 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Pste1g03820 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 337 420 - -
Pste1g03820 807 CDD B_lectin 29 150 IPR001480 -
Pste1g03820 807 Gene3D - 27 147 IPR036426 -
Pste1g03820 807 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 751 - -
Pste1g03820 807 CDD STKc_IRAK 495 763 - -
Pste1g03820 807 ProSiteProfiles Bulb-type lectin domain profile. 22 144 IPR001480 -
Pste1g03820 807 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Pste1g03820 807 SUPERFAMILY Protein kinase-like (PK-like) 471 762 IPR011009 -
Pste1g03820 807 PIRSF SRK 1 807 IPR024171 GO:0004674
Pste1g03820 807 SMART ntp_6 341 420 IPR003609 -
Pste1g03820 807 SMART blect_4 28 150 IPR001480 -
Pste1g03820 807 Pfam D-mannose binding lectin 70 176 IPR001480 -
Pste1g03820 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 181 IPR036426 -
Pste1g03820 807 ProSiteProfiles Protein kinase domain profile. 489 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03820 807 SMART serkin_6 489 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03820 807 Gene3D Phosphorylase Kinase; domain 1 468 564 - -
Pste1g03820 807 CDD PAN_AP_plant 335 421 - -
Pste1g03820 807 Gene3D Hepatocyte Growth Factor 338 418 - -
Pste1g03820 807 Pfam Protein tyrosine and serine/threonine kinase 491 758 IPR001245 GO:0004672|GO:0006468
Pste1g03820 807 Gene3D Transferase(Phosphotransferase) domain 1 565 778 - -
Pste1g03820 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 565 769 - -
Pste1g03820 807 Pfam PAN-like domain 338 406 IPR003609 -
Pste1g03820 807 ProSiteProfiles PAN/Apple domain profile. 338 422 IPR003609 -
Pste1g03820 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 457 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03820 Pste-Chr1 18985895 18990670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03820 438 775 Receptor kinase-like Gene Family AT4G23230 54.179 9.92e-121 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03820 PK_Tyr_Ser-Thr 6e-49 CL0016