Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03819 CCTCCACTAAATCTTCAACCGATTCCAAGTGAGGAATATGAATGGAAAGATGATGGGGAGAAAACGAGAATTCTAAATGCTGCTGTTGATATCAATTTGTTTGATATCATAGCAAAGGCAAAAAGTTCATGTGATTCAAGTTTATCTGCCTCTGAAATTGCTTCTTTGCTTCCAAATCAACACCCCCAATTGGCTAATAGACTTGAACGCATATTGCCACTGTTGGCTAGTTATTCTCTTTTTGATTGTTCCATTCGCACCAATGAAGATGGTAAGAGAGAAAGGGATGTAAAGGATGCAATTGTAGACCATGACAATAATATCCATTTTCAAAATGTTCATGGAATGCCATTATATGATTATATGGAGAAAAATGCTGAGCTTAATCACATTTTTCACAAAGCAGGAACTCACTATGCCCCCATAGAACTCAAAAAGATTCTCAAATCATATAAAGGATTTGAGGGACTGTCAACACTAGTCGATGTAGGAGGTGGACTAGGAGATACCTTGAAACAAATTCTAGTTGCATATCCTTCAATCAAAGGAATTAATTTTGATTTACCTCAAATGATTCAAAATGCATCACCTCATCCAGGTATTGAGCATATTGGAGGAGATATGTTTAAAAGTGTTCCAAGTGGTGATGCCATTTTACTAAAGTTTGTTTGTCGCAATTGGCCAGACAAAGATTGTATAAAGTTTTTAAAAATTTGTCACAAAGCTTTGCCACAGCATGGAAAAGTGATTGTTATGGACTATATAATTCCAAATGTTCCAAATTCAAGCTATATATCAAAGCATACTTGCACTGTCGACAATGTCATGTTTTTAGCCCATGATGGAAGAGGAAGAACAGAAAATGAATTTAAGAACTTGTGCAAAAGTTCTGGATTTTCCAAGTTTCATGTTGGAACATTACTCAAAATGGATTCCAATTCCGAAGAGAGTAAAGTTTCCCAAGTAGAAAAGGTCGACGATGCTTACCTTTCTGCTGTGTTACTTTGTTTTAGTCGTGTTCTCCCTGCAGTTCTAAATGCTGCTATTGATCTCAATTTGTTTGATATCATAGCAAAGGCCAAAAGTTCATGTGATTCAAGTTTATCTGCCTCTGAAATTGCTTCTTTGTTTCAAAATCAACACCCCCAATTGGCTAATAGGCTTGAACGCATATTGCCATTGTTGGCTAGTTATTCTCTTCTAAATTGCTCCATTCGCACCAATGAAGATGGTAAGAGAGAAAGAGTTTATGCTCTCACACCTGTTGGACAATACTTTGCATTTGATAGTGAAGGAATCTCTTTGGCCCCTCTCCAAACTTTGAAGGATATGAAGGATGCAATTATGGATCCTGACAACAATAACCATTTTGAACATGTCTATGGAATGTTGTCATATCAATATATGGAGAAAAATACAGAGCTAAATAACATGTTTTACAAAGCAATGGCTCATGCTGGTCCAATAGAAGTGAAAAGGATACTTAGTTTATATAAAGGATTCAAGGGAGTCTCGACATTGGTTGATGTTGGAGGTGGAGTAGGAGAGACCTTGAAACTCATTGTCTCTGCATATCCTTCAATTAAAGCAATTAATTTTGATTTGCCTCAAATGATTCAAGACGCACCACCTCATCCAGGTATAGAGCATGTTGGAGGAGACATGTTTAAAAGTGTTCCAAGTGGTGATGCCATTTTACTAAAGTCTATATTGCATAATTGGCCAGATGAAGATTGTATAAAGATTTTAAGAAATTGTCATGAAGCTTTGCCACAACATGGAAAAGTAATAGTTTTGGATTATATAATTCCAGAGGTTCCAAATTCAAGCGATTCATCTAAGCATATTTGTACGGTTGATAATCACATGTTTTTGGCGCATGGTGGAAGGGAAAGAACAGAGAAAGAATTTGAGAACTTTTGCAAGACCTCTGGTTTTTCCAAGTTTTATGTCACATGTAGCAACATCTCAGCTACGGTAGGAGTGTTGGAATTTTACAAATAGAAATTGTTGAGCAGTAGTTTAAATCTATGCATATTAGAAATTAAACTATCTTGAATAACAAAAAGCTAAATATCATTTTAGTCCTTTTTTC 2095 0.3585 PPLNLQPIPSEEYEWKDDGEKTRILNAAVDINLFDIIAKAKSSCDSSLSASEIASLLPNQHPQLANRLERILPLLASYSLFDCSIRTNEDGKRERDVKDAIVDHDNNIHFQNVHGMPLYDYMEKNAELNHIFHKAGTHYAPIELKKILKSYKGFEGLSTLVDVGGGLGDTLKQILVAYPSIKGINFDLPQMIQNASPHPGIEHIGGDMFKSVPSGDAILLKFVCRNWPDKDCIKFLKICHKALPQHGKVIVMDYIIPNVPNSSYISKHTCTVDNVMFLAHDGRGRTENEFKNLCKSSGFSKFHVGTLLKMDSNSEESKVSQVEKVDDAYLSAVLLCFSRVLPAVLNAAIDLNLFDIIAKAKSSCDSSLSASEIASLFQNQHPQLANRLERILPLLASYSLLNCSIRTNEDGKRERVYALTPVGQYFAFDSEGISLAPLQTLKDMKDAIMDPDNNNHFEHVYGMLSYQYMEKNTELNNMFYKAMAHAGPIEVKRILSLYKGFKGVSTLVDVGGGVGETLKLIVSAYPSIKAINFDLPQMIQDAPPHPGIEHVGGDMFKSVPSGDAILLKSILHNWPDEDCIKILRNCHEALPQHGKVIVLDYIIPEVPNSSDSSKHICTVDNHMFLAHGGRERTEKEFENFCKTSGFSKFYVTCSNISATVGVLEFYK 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03819 667 Gene3D - 340 494 IPR036388 -
Pste1g03819 667 Pfam Dimerisation domain 344 396 IPR012967 GO:0046983
Pste1g03819 667 Pfam Dimerisation domain 24 76 IPR012967 GO:0046983
Pste1g03819 667 Gene3D - 24 147 IPR036388 -
Pste1g03819 667 Pfam O-methyltransferase domain 443 647 IPR001077 GO:0008171
Pste1g03819 667 Pfam O-methyltransferase domain 96 300 IPR001077 GO:0008171
Pste1g03819 667 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 96 304 IPR029063 -
Pste1g03819 667 Gene3D Vaccinia Virus protein VP39 129 304 IPR029063 -
Pste1g03819 667 Gene3D Vaccinia Virus protein VP39 476 654 IPR029063 -
Pste1g03819 667 CDD AdoMet_MTases 159 256 - -
Pste1g03819 667 SUPERFAMILY "Winged helix" DNA-binding domain 23 95 IPR036390 -
Pste1g03819 667 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 441 655 IPR029063 -
Pste1g03819 667 CDD AdoMet_MTases 506 603 - -
Pste1g03819 667 FunFam Caffeic acid 3-O-methyltransferase 22 100 - -
Pste1g03819 667 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 318 IPR016461 GO:0008168
Pste1g03819 667 SUPERFAMILY "Winged helix" DNA-binding domain 325 429 IPR036390 -
Pste1g03819 667 PANTHER O-METHYLTRANSFERASE 336 649 IPR016461 GO:0008168
Pste1g03819 667 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 333 667 IPR016461 GO:0008168
Pste1g03819 667 FunFam Caffeic acid 3-O-methyltransferase 311 426 - -
Pste1g03819 667 FunFam Uncharacterized protein 424 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03819 Pste-Chr1 18977887 18998617 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03819 313 667 Monolignol Biosynthesis Gene Families AT5G54160 45.652 2.07e-100 310