Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03816 ATCTCTGACCCAATGCACATTCTTTATTTCATGATTTTATTTCCATGCATACTTGTACCCTCTCTCAAAATTTCCTTAGCAGATGATAATTCTATGTACCTTCTCCAGTCTATGCGTGATGGGGAAACATTGATATCCAAAGGTACAAAGTTTGAATTTGGTTTTTTCAGCCCAGGTAGTTCCCAGAAACGTTACCTGGGAATTTGGTACAAGAATATCCCAATTAAAACAGTTGTTTGGGTTGCTAATAGGGCCAACCCCATCAATGATTCCTCAGGCATCTTAACAGTTAACAGCACAGGCAATCTTGTTCTTACCACAAATGGCTCTCTTGTTTGGTCCACCACCAACAACAACTTTCACAAACAAGCACAGAATACAGTGGTAGAGCTCTTGGATAGTGGCAATCTTGTGATAAGAAATGAGGGAGAAACAAACCCAGAAGAATACTTGTGGCAAAGCTTTGACTATCCATCTGATACACTCTTGCCAGGGATGAAGTTGGGTTGGGACCTAAGAACTGGTCTTGATCGGAGACTAACAGCATGGAAGAGTCCAGATGATCCATCCCCAGGTGAAGTTTATCGAGATTTGAAACTCTATAGCTACCATGAGTTTTATATAATGAAGGGAACAAAAAAAGTGTTCCGGTTTGGACCTTGGAATGGCCTATATTTTAGTGGAGTTCCAGATCTACGAAACAACTCCGTTTTTGTCTTCAATTTTATCAGCAACAAAGATGAGAGTTACTACATATTTAACCCTGGAAATGATGTTGTCATGTCCAGAATTGTGATGAACGAATCAAGTACCATTTATCGTTATGTATGGGTTGAGGAAGACCAAAATTGGAGGATATACACTTCACTACCGAAAGACTTTTGTGACACTTATGGTCTCTGTGGAGCCTATGGGAATTGCATGACTACCCAAACACTAGTATGCCAATGTTTGAAAGGGTTTAAACCAAAGTCACCAGAAGCATGGGTTTCATCTGGGTGGAGTCAAGGATGTGTTCGGAATAAACCATTAAGCTGCCAGGACAAACTCACAGATGGGTTTCTCAAATTTAAAGGGCTGAAAGTTCCAGATACTACTAATACTTTCTTGGATGAGAGTATTGGTCTAGATGAATGCAGAGACAAGTGTTTGAATAATTGTTCTTGTATGGCTTATACTAATTCAGACATAAGAGGTAGAGGTAGTGGTTGCGTCTTGTGGTTTGGAGATCTCATTGACATGAAACAGCTTCAAAGTGGTGGACAAGATCTATATATCAGGATGCCTGCTTCAGAGTTAGATTACAAGAAGAATACACGAACGATAGTTGCTTCCACGCTGGCTGCAATTTTTGGTGTTTTGTTATTAAGTTCTTATTTTATCTGCAGAATTCAAAGGAACTGTGAAGTTAGGCTCGGCGGCGCATTTGGCCAGATGCATTTGTTGTTTGGTTTGGTGGTGTTGATTAGGCGTTCTTTGGTGTTTTCTTTGGCTATATTTTGTGGTACATTTTATAACATTATTGAAGATCATCCTATTTTTCTAGGAAATTTATTGGCAGGAGATAACAATAAAAAACATGTGGAAGATTTGGACATCCAATTGTTTGATCTACAAACAATTGCAACTGCTACAAACGACTTCTCTATTGATAATAAAATTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGGATATTATTGGATGGGCAAGAAATTGCTGTAAAGACTTTATCAAGGAGCTCATGGCAAGGAGTTCCAGAGTTCATAAATGAAGTAAAATTGATTGCAAATCTTCAACATCGAAATCTTGTAAAACTTTTTGGTTGTTGCATTCAAGAACAAGAAAAAATGCTAATTTATGAGTACATGTCAAATGGCAGTCTAGATTCCTTCATTTTTGATGACAACAAACGCAAATTTTTAAAGTGGCCTCAACGCTTTCACATAATATGTGGAATTGCAAGGGGACTTATGTATCTTCATCAAGATTCTCGATTAAGGATTATTCATAGAGATTTAAAAGCAAGTAATGTCTTACTCGATGAAAATATGAGTCCAAAAATATCAGATTTTGGAACAGCTAGAACTTTTGGAGGAGACGAATCTGAAGGAAATACAAGTAGATGGATATATGGCTCCAGAGTATATGCTGTTGATGGATTATTTTCTGTGAAATCTGATGTCTTTAGCTTTGGCATTTTAGCATTGGAGATTGTATGTGGCAAGAGAAATAAAGGGCTTTACCATGCAGATAAGAGTCTTAATCTAGTTGGACATGTGTGGACATTATGGAAAGCGGGAAGGGTATTAGATTTGATTGACTCTAACATGAGGGATTCATGCATTGTATCAGAAATATTACGTTGCCTACATGTTAGTCTTTTGTGTGTTCAACAATATCCAGAAGATAGACCTACAATGACATCTGTGATTCTGATGTTGGAGAGTCATGTGGAATTGGCTGAGCCTAAAGAGCACGGTTTCATTTTAAGAAATATTTTAGATGAAGGAGATTTACACTCAAATCGAAACACAAGTTCCAGCAATCATGTGACAATTACCTTGCTAGAGGCACGTTGATACTCGATCACGAAATAATGTTAATCGGAGATAAATCAAAATATAGATATATGAGGATATGAATTGTTAACTTATTTGTCAAAAGTTGATTAATTTTTATGACGT 2688 0.3743 ISDPMHILYFMILFPCILVPSLKISLADDNSMYLLQSMRDGETLISKGTKFEFGFFSPGSSQKRYLGIWYKNIPIKTVVWVANRANPINDSSGILTVNSTGNLVLTTNGSLVWSTTNNNFHKQAQNTVVELLDSGNLVIRNEGETNPEEYLWQSFDYPSDTLLPGMKLGWDLRTGLDRRLTAWKSPDDPSPGEVYRDLKLYSYHEFYIMKGTKKVFRFGPWNGLYFSGVPDLRNNSVFVFNFISNKDESYYIFNPGNDVVMSRIVMNESSTIYRYVWVEEDQNWRIYTSLPKDFCDTYGLCGAYGNCMTTQTLVCQCLKGFKPKSPEAWVSSGWSQGCVRNKPLSCQDKLTDGFLKFKGLKVPDTTNTFLDESIGLDECRDKCLNNCSCMAYTNSDIRGRGSGCVLWFGDLIDMKQLQSGGQDLYIRMPASELDYKKNTRTIVASTLAAIFGVLLLSSYFICRIQRNCEVRLGGAFGQMHLLFGLVVLIRRSLVFSLAIFCGTFYNIIEDHPIFLGNLLAGDNNKKHVEDLDIQLFDLQTIATATNDFSIDNKIGEGGFGPVYKGILLDGQEIAVKTLSRSSWQGVPEFINEVKLIANLQHRNLVKLFGCCIQEQEKMLIYEYMSNGSLDSFIFDDNKRKFLKWPQRFHIICGIARGLMYLHQDSRLRIIHRDLKASNVLLDENMSPKISDFGTARTFGGDESEGNTSRWIYGSRVYAVDGLFSVKSDVFSFGILALEIVCGKRNKGLYHADKSLNLVGHVWTLWKAGRVLDLIDSNMRDSCIVSEILRCLHVSLLCVQQYPEDRPTMTSVILMLESHVELAEPKEHGFILRNILDEGDLHSNRNTSSSNHVTITLLEAR 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03816 860 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 806 - -
Pste1g03816 860 Pfam D-mannose binding lectin 77 184 IPR001480 -
Pste1g03816 860 SMART serkin_6 548 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03816 860 SMART ntp_6 349 428 IPR003609 -
Pste1g03816 860 ProSitePatterns Serine/Threonine protein kinases active-site signature. 669 681 IPR008271 GO:0004672|GO:0006468
Pste1g03816 860 Gene3D - 25 155 IPR036426 -
Pste1g03816 860 Gene3D Transferase(Phosphotransferase) domain 1 624 829 - -
Pste1g03816 860 SMART blect_4 35 158 IPR001480 -
Pste1g03816 860 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 624 823 - -
Pste1g03816 860 CDD PAN_AP_plant 343 429 - -
Pste1g03816 860 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 517 623 - -
Pste1g03816 860 ProSiteProfiles Bulb-type lectin domain profile. 29 152 IPR001480 -
Pste1g03816 860 Gene3D Phosphorylase Kinase; domain 1 522 623 - -
Pste1g03816 860 ProSiteProfiles Protein kinase domain profile. 548 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03816 860 CDD B_lectin 40 158 IPR001480 -
Pste1g03816 860 Pfam S-locus glycoprotein domain 216 325 IPR000858 GO:0048544
Pste1g03816 860 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 155 - -
Pste1g03816 860 ProSiteProfiles PAN/Apple domain profile. 346 430 IPR003609 -
Pste1g03816 860 PIRSF SRK 2 860 IPR024171 GO:0004674
Pste1g03816 860 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 189 IPR036426 -
Pste1g03816 860 SUPERFAMILY Protein kinase-like (PK-like) 531 816 IPR011009 -
Pste1g03816 860 Pfam Protein tyrosine and serine/threonine kinase 549 812 IPR001245 GO:0004672|GO:0006468
Pste1g03816 860 Pfam PAN-like domain 348 414 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03816 Pste-Chr1 18941131 18948871 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03816 522 856 Receptor kinase-like Gene Family AT4G23150 50.294 4.36e-110 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03816 PK_Tyr_Ser-Thr 3.2e-44 CL0016