Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03813 AGAGTTGAAAAAAATGGCGAACATCAATGCAACTGTGCCATTGCCCTCAAACCTTTGGGTTGTGGATGGAAGCCCTGAATGGTTGAGCAGAGCAGACAATGCATGGCAGTTAACAGCTGCAACACTGGTGGGTATGCAGAGTGTGCCAGGGCTCATAATCTTGTACGGTGGAGCAGTGAAGAAGAAATGGGCGGTGAACTCTGCATTCATGTCACTCTATGCTTTTGCATGTGTGTTTTTTTGTTGGGTTGTGTGGGGCTACCGGATGTCTTTTGGTGATCAACTTGTTCCTTTCTGGGGAAAACCTGCTATGTCACTTGAACACGCTTATCTTTTCAAGAAAGCATTTTTGGGGGCATTTCCAAATGCCACTATGGTCTATTTTCAGTGTGTCTTTGCTGCCATTACTTTGATTCTCATTGCTGGGGCTGTGTTGGGGCGCATGAACTTCTATGCTTGGATGTTGTTTGTGCCTTTGTGGCTCACTTTCTCATACACCTTCACAGCTTTCAGCATATGGAGTGCTAGTGGATTTTTAACCAAAATGGGGATAATAGACTATTCAGGTGGATATGTGATCCATTTGTCTTCCGGGGTTGCAGGATTCACAGCTGCATTTTGGGTTGGACCAAGGCTGAACAAGGACAGAGAAAGGTTCCCTCCAAACAACATCCTTCTAATGTTGACAGGAGCAGGGTTGTTGTGGATGGGGTGGACAGGGTTCAATGGAGGAGATCCATACATAGTGAACGTGGATGCTTCCTTGGCTGTCCTCAACACACATGCTTGCACTGCTACCAGCTTGCTCACTTGGGTCATTCTTGATGTCATCTTTTTCCGAAAGCCTTCTGTCATTGGAGCTGTTCAGGGCATGATCACCGGCTTGGTTTGCATTACCCCTGCTGCAGGAGTTGTGCAGGGATGGGCAGCACTTATAATGGGAGTGTTCTCTGGCTCAATCCCTTGGTTCACCATGATGGTGATCCATAAGAGATCAAAGCTACTGCAAAAGGTTGATGACACAATGGCAGTGTTCCACACTCACGCCATTGCAGGAACCCTAGGAGGACTCCTCACTGGACTCTTTGCTGATCCAAGACTTAACAGAATGTTCTATGGACTTTCTGCTCAATACGTTGGCCTTTTTTATGGTTTCAGTTCCAACATGGTCAGCACGGGGATCAGGCAAATGGGTGTCCAAATCCTTGGAATTTTATTTGTCATCTTTGTTAATGTTATCAGCACAAGTTTGATTTGCCTCTTCATTAGACTTCTTGTTCCATTGAGAATGTCTGAAGAGGATATGGAGATTGGTGATGAGGCTGCTCATGGGGAAGAAGCTTATGCAATATGGGGTCAAGGTGATAAGCATGAAAATTCAAGTTCAAAGTATGCAAGTTCATTATATGAAGATGTTGAAGCTGGCACACCCAAGAAG 1438 0.4541 MANINATVPLPSNLWVVDGSPEWLSRADNAWQLTAATLVGMQSVPGLIILYGGAVKKKWAVNSAFMSLYAFACVFFCWVVWGYRMSFGDQLVPFWGKPAMSLEHAYLFKKAFLGAFPNATMVYFQCVFAAITLILIAGAVLGRMNFYAWMLFVPLWLTFSYTFTAFSIWSASGFLTKMGIIDYSGGYVIHLSSGVAGFTAAFWVGPRLNKDRERFPPNNILLMLTGAGLLWMGWTGFNGGDPYIVNVDASLAVLNTHACTATSLLTWVILDVIFFRKPSVIGAVQGMITGLVCITPAAGVVQGWAALIMGVFSGSIPWFTMMVIHKRSKLLQKVDDTMAVFHTHAIAGTLGGLLTGLFADPRLNRMFYGLSAQYVGLFYGFSSNMVSTGIRQMGVQILGILFVIFVNVISTSLICLFIRLLVPLRMSEEDMEIGDEAAHGEEAYAIWGQGDKHENSSSKYASSLYEDVEAGTPKK 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03813 475 ProSitePatterns Ammonium transporters signature. 182 207 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pste1g03813 475 NCBIfam ammonium transporter 28 444 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pste1g03813 475 Gene3D Ammonium transporter AmtB like domains 15 463 IPR029020 -
Pste1g03813 475 SUPERFAMILY Ammonium transporter 23 426 - -
Pste1g03813 475 FunFam Ammonium transporter 13 447 - -
Pste1g03813 475 Pfam Ammonium Transporter Family 30 444 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pste1g03813 475 MobiDBLite consensus disorder prediction 450 475 - -
Pste1g03813 475 PRINTS Rhesus blood group protein signature 221 239 IPR002229 GO:0005886
Pste1g03813 475 PRINTS Rhesus blood group protein signature 125 141 IPR002229 GO:0005886
Pste1g03813 475 PRINTS Rhesus blood group protein signature 252 274 IPR002229 GO:0005886
Pste1g03813 475 PANTHER AMMONIUM TRANSPORTER MEP2 17 456 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03813 Pste-Chr1 18914528 18918092 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03813 119 474 Inorganic Solute Cotransporters AT2G38290 61.798 1.57e-146 421