Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03812 ATCCATCCATATCATCAATATCCAAATAATCGAGTAACACAAAGTTATAGCAGTGATTCAATGGACTTTCTTTCTTTCATGATTATGGTTGCTTGCATATTTATCCCCTCTCTCAGAATTTCCGTAGCAAATGATTCTATTCACAGGACCCATTCCATGAGTGATGGGGATACCTTGGTGTCTAAAGGAGGAAAATTTGTCCTTGGGTTTTTCAGCCCAGGTAGTTCCCAGAAACGTTACCTGGGCATTTGGTACAAGAATATCCCAATTCAAACAGTTGTTTGGGTTGCTAATGGTGCCAACCCCATCAACGATTCCTCAGCCATCTTAACACTGAACAGCACAGGTAATCTTGTTCTCACCCAAAATGGTTCTCTTGTTTGGTCCACCACCACCAATTCTCAGAAACAAGCACACCATCCAGAGGCAGTGCTCTTGGACGGTGGCAATCTTGTGATAAGAGATGAGGAAGAAACAAACCCAGAAAAGTACATGTGGCAAAGCTTTGATTATCCTACTGATGCATTCTTGCCAGGGATGAAGTTGGGAAGGAACCTCAGAACTGGCCATGAGTGGAAACTAACAGCCTGGAAGAGTCCAAATGATCCATCCCCAGGAGATGTTTATAGGGTTCTAGAACTCTATAACTACCCTGAGTTTTATATAATGAAAGGAACAAAAAAGGTATACCGGTTTGGACCTTGGAATGGCCTAAATTTTGGTGGAATGTCTGATTTAAGGAATAATAGCATGTATAGCTTTTATTACGTTAGCAATAGCGAGGAGATTTACTTCAGTTATAGCCTTGCAAATGATTCTGTCATCACCAGATCTGTAGTAAACCAAACAACAAGTTCAATTGATCGCTATATGTGGTTGAAGGGAGGTAATGATTGGAAGGTATATAGAAACGTCCCAGAAGATTTTTGTGACACTTATAGCCTGTGTGGAGCCAACGCGAATTGTGTAAGTAGTACTCAACCCCAAGCTTGCCAATGTTTAAAAGGGTTTAGTCCAAAGTCACCTCAAGCTTGGGACTCATCAGATTGGAGTAGAGGATGTGTTCGTATTAAACAGTTAAACTGCAAAGACAAATTGACAGATGGGTTTATTAAATACGTAGGGTTGAAAGTTCCAGATACTGCACATACTTGGTTGGATGAGAGCATTGGTTTAGAGGAATGCAAATTGAAGTGTTTGAATAATTGTTCTTGTATGGCATGTGCTAATTCAGACATAAGAGGTGAGGGTAGTGGTTGTGCCCTGTGGTTTGGAGATCTCATTGATATGAAGGTTCTAAGTGGTGGACAAGATCTATATGTCAGGATGCCTGCTTCAGAGTTAGAGCATGTTTATGAGCACAAAAAGAAGACACTAACAATAGTTGCTTTCGCCATTGCAATTTGCGGTAGTGGGGTCGTTCTCATACTAGCTACGTATTTTATTTGCAGAATCCGGAGGAAAAACACTGGAAATTCATTGACAGAAGATTACGATGAAAAACATGTGGATGACCTAGACATCCAATTGTTTGATCTACCAATAATTATGACTGCAACTAAGGAATTCTCTATGGAGAATAAAATTGGTGAAGTAAAGACTTTATCAATGAGCTCATGGCAAGGCGTGACAGAGTTCATAAATGAAGTAAATTTAATTGCAAAACTTCAGCATCGGAATCTTGTGAAACTTCTTGGTTGTTGCATTCAAGGACAAAGGAAAATGTTAATTTATGAGTATATGGCAAATGGTAGCTTAGACTGCTTCATTTTTGATGGGACAAAAGGTAAATTGCTAGAATGGCCTCAACGCTTTCAGATAATATGTGGAATTGCAAGGGGGCTTATGTATCTTCATCAAGATTCCCGCTTAAGAATTATCCATAGAGATCTCAAAGCAAGTAACGTACTACTTGATGAAAATCTAAATCCAAAAATTTCAGATTTTGGAATAGCCAAAACCTTTGGAGGAGACCAAATTGAGGGAAACACAAGAAGAGTAGTTGGGACCTACGGGTACATGGCACCAGAGTATGCTGTTGATGGGTCATTTTCTGTGAAATCTGATATTTTATGTGGCAAGAAAAGCAGAGGACTTTATCACACAGATGAGAGTCTTAACCTTGTTGGTCACGCATGGACATTGTGGAAAACATGTAGGGCATCAGAGTTGATCGATACCAACTTGAAGGACTCATGCATTATATCAGAAGTATTGCGTTGCCTTCATATTAGTCTTTTGTGTGTGCAACAATACCCAGAAGATAGGCCTACAATGGCCTCAGTGATTCTAATGTTAGAAAGTAACCTGGAATTGGTTGAGCCTAAAGAACATGGATTCATTTCAAGAAATGTTTTCGGTGAAGGGGATTTATCCACAAATTCGAAAGACATGAGTTCAAGCAACCACGTGACAATTACCATAGAAGCACGATAAACAAAAAGGA 2446 0.3957 IHPYHQYPNNRVTQSYSSDSMDFLSFMIMVACIFIPSLRISVANDSIHRTHSMSDGDTLVSKGGKFVLGFFSPGSSQKRYLGIWYKNIPIQTVVWVANGANPINDSSAILTLNSTGNLVLTQNGSLVWSTTTNSQKQAHHPEAVLLDGGNLVIRDEEETNPEKYMWQSFDYPTDAFLPGMKLGRNLRTGHEWKLTAWKSPNDPSPGDVYRVLELYNYPEFYIMKGTKKVYRFGPWNGLNFGGMSDLRNNSMYSFYYVSNSEEIYFSYSLANDSVITRSVVNQTTSSIDRYMWLKGGNDWKVYRNVPEDFCDTYSLCGANANCVSSTQPQACQCLKGFSPKSPQAWDSSDWSRGCVRIKQLNCKDKLTDGFIKYVGLKVPDTAHTWLDESIGLEECKLKCLNNCSCMACANSDIRGEGSGCALWFGDLIDMKVLSGGQDLYVRMPASELEHVYEHKKKTLTIVAFAIAICGSGVVLILATYFICRIRRKNTGNSLTEDYDEKHVDDLDIQLFDLPIIMTATKEFSMENKIGEVKTLSMSSWQGVTEFINEVNLIAKLQHRNLVKLLGCCIQGQRKMLIYEYMANGSLDCFIFDGTKGKLLEWPQRFQIICGIARGLMYLHQDSRLRIIHRDLKASNVLLDENLNPKISDFGIAKTFGGDQIEGNTRRVVGTYGYMAPEYAVDGSFSVKSDILCGKKSRGLYHTDESLNLVGHAWTLWKTCRASELIDTNLKDSCIISEVLRCLHISLLCVQQYPEDRPTMASVILMLESNLELVEPKEHGFISRNVFGEGDLSTNSKDMSSSNHVTITIEAR 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03812 811 Gene3D - 39 169 IPR036426 -
Pste1g03812 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 93 203 IPR036426 -
Pste1g03812 811 Gene3D Transferase(Phosphotransferase) domain 1 581 779 - -
Pste1g03812 811 Pfam S-locus glycoprotein domain 230 341 IPR000858 GO:0048544
Pste1g03812 811 Gene3D Hepatocyte Growth Factor 361 442 - -
Pste1g03812 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 40 169 - -
Pste1g03812 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Pste1g03812 811 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 27 757 - -
Pste1g03812 811 ProSiteProfiles Bulb-type lectin domain profile. 44 166 IPR001480 -
Pste1g03812 811 Pfam PAN-like domain 364 430 IPR003609 -
Pste1g03812 811 Gene3D Phosphorylase Kinase; domain 1 497 580 - -
Pste1g03812 811 SMART blect_4 50 172 IPR001480 -
Pste1g03812 811 SMART ntp_6 365 443 IPR003609 -
Pste1g03812 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 581 774 - -
Pste1g03812 811 PIRSF SRK 17 811 IPR024171 GO:0004674
Pste1g03812 811 ProSiteProfiles Protein kinase domain profile. 479 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03812 811 ProSiteProfiles PAN/Apple domain profile. 362 444 IPR003609 -
Pste1g03812 811 Pfam Protein tyrosine and serine/threonine kinase 532 762 IPR001245 GO:0004672|GO:0006468
Pste1g03812 811 ProSiteProfiles EGF-like domain profile. 306 343 IPR000742 -
Pste1g03812 811 SMART serkin_6 523 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03812 811 Pfam D-mannose binding lectin 92 198 IPR001480 -
Pste1g03812 811 CDD B_lectin 50 172 IPR001480 -
Pste1g03812 811 SUPERFAMILY Protein kinase-like (PK-like) 507 766 IPR011009 -
Pste1g03812 811 CDD PAN_AP_plant 359 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03812 Pste-Chr1 18909704 18921067 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03812 461 780 Receptor kinase-like Gene Family AT4G23230 47.564 2.41e-97 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03812 PK_Tyr_Ser-Thr 1.5e-33 CL0016