Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03808 ATGATGCACAAAATGTGGAGCTTGATGGACCTTCTTTCTCTCATGATTGTTGTTGCCTGTGCAATTGTTGCTTGTCTTAGAGTTTCCATAGCGGTTGATTCTATTGGTGTGTCACGATCCATCAGTGATGGAAAGACGTTGGTGTCCCTAGGTGGAAGATTTGAGCTTGGTTTCTTCAGCCCAGGCAACTCTAACTTACGTTACCTGGGTATTTGGTACAAGAATATTCCAATTCGAACTGTTGTTTGGGTTGCAAACAGAGAAAAACCCATAAATGGTTCTTCAGGAATGTTAACATTGAACACTGCAGGCAACCTTGTGCTTAGCCAAAATGGCACAGTTGTTTGGAATACAACATCCATAAAACTAGCACGGAATCCAGTGGCGCAGCTTTTGGACAGTGGCAATCTTGTGGTAAGAAATGAGGCAGAAGCAAACTCAGAAGACTATATGTGGCAAAGTTTTGACTATCCATTAGATACACTGATATCAGGGATGAAGTTTGGATGGAACCTAAAACTTGGTCAGGCTTGGCGATTAACATCATGGAAGAGTTCAGATGATCCCTCACCAGGAAGCCTCTCTTGGGGTATGGTGCTTCATAACTATCCTGAGTTTTATATGATGAAGGGACAAAAAACGCTTTACCGGCTTGGACCTTGGAATGGCCGATCTTTTAGTGGACTAACAAATTTAGGCGTGAACCCCATCTTTGATTTCAAGTATTTCAGAAGCAAGGACGAGATTTTCTACAGATATAGCCTTGTCAATGAGTCTCTCATCTCCAGAATTGTGATAAACGAAACCACCAGTAAGTATTACCTTTATGTATGGGTGGAAGGTGAGCAAAATTGGAAGGAATATAATTCCCTCCCAGCAGAAAATTGTGATACTTATGCCCTCTGTGGAGCCTATGGGAACTGCATGAATACACAACTACAAGTGTGCCAATGTTTAAAAGGGTTCAGTCCTAAGTTACCACTTGAATGGAATTCATCAGATTGGAGTCAAGGATGTGTTCGCAATAAACCATTGAGCTGCAACGACAGAGACAGTGATGGATTTGTCAAATTTGAAGGCCTCAAAGTTCCAGACACTACTCAGACTTGGTTGGATGAGAGTATTGACCTAGAGGAATGCAGAGTCAAGTGCCTAAATAATTGTTCTTGTATGGCTTATGCTAATTCAGACATAAGTGGAACAGGTAGTGGCTGTGTCATGTGGTTTGGCGATTTGATCGACCTCAAACAGTATCAATCTGGTGGGCAAGATCTATATATCCGGATGCAAGCTTCAGAGTTAGAATCCAACCCTCAAGAACCTGAAAGTAGGAGCAAAAAGAATATCAGAATTATAGTGTCTACCACAGTTGCACCTGCAATTTTTGTGGTCATTTTACTGAGTACTTACTTGGTTTGCAGAGTTCTGAGGAAGAACATTTCTGAGAATATATTAACCGAAACAGAACATGACAACGAAAGACTTGCAAATGATCTGGATATCCCATTGTTTGATCTGCCAACAATTGTTTCGGCCACAGATGACTTCTCCATGAGAAATAAAATAGGACAAGGTGGGTTCGGACCTGTATACAGGGGATTACTTGTGAATGGTCAAGAAATTGCTGTGAAGACTCTATCAAGTAGCTCAGGACAAGGATTGACAGAGTTTGTAAATGAAGTAAAATTGATTGCAAAACTTCAGCATCGAAATCTTGTAAAGCTTCTTGGTTGTTGTATCGAAGGACATGAAAACATGCTAGTTTATGAATACATGCCAAATGGTAGCCTAGACTCCTTCATTTTCGATGACACCAAAGGCAAATTACTAAGTTGGCCTCAGCGCTTCAACATAATCAGGGGAATTGCAAGGGGACTGATGTATCTTCACCAAGACTCCCGATTAAGAATTATCCATAGAGATCTTAAAGCAAGTAATGTGTTGCTTGATGAAAATTTGAATCCAAAAATATCAGATTTTGGAATGGCCAAAACCTTTGGAGGAGACCAGACTCAAGGAAACACAAATAGAATAGTTGGAACTCATGGATATATGGCACCGGAATATGCTGTTGATGGATTGTTTTCAGTGAAATCTGATGCTTTTAGCTTTGGCATCTTATTGCTGGAGGTTTTATGTGGCAATAGAAATAGAGCATATTATCACACAGACAACACTCTTAATCTTGTTGGGCAGGCTTGGAAAATGTGGAAAGAGAACAGAGCTATAGAACTGATCCACCCCAACCTAAGAGTCTCGTACGTTGAATCAGAAGTATTGCGTTGCATGCATGTTAGTCTCCTATGCGTGCAGCAGCAACCAGATGATAGACCTACCATGCACTCTGTGATTCTAATGTTGGATAGTGAGATGGAATTGGTTCATCCTAAAGAACCTGGTTTCATTTCAAAACATGTTTCGACAGAAGTAGATTCCACGGATAAGAGTTCAACCAATGAAGTAACCATTTCATTAATAAACCCTCGGTGAAGATCCTTTGACATTGCACTATGTATTATGAGGCACGCTGTATAAGGAAGCTCTTTTACAATGAGTTGGTATAGTTTTATAATGATAGGATTATGTTACTTGAATGTGTCAGGTTCATAAGTTCCATGAAACTAATAGGGTATAGTACACATTGGGATTTTCCAATCACCTCCTTCAAGTTTGATAAAACTTGGTTGCTGATTTTATTTTGTGTTTCCTATTTTAAGTTGAAGTCTTTCTTTCTAATTTTGTTATAGCACTCACGGAAAAGAGTTTGAGCATACAAAAACCGGTTA 2786 0.3984 MMHKMWSLMDLLSLMIVVACAIVACLRVSIAVDSIGVSRSISDGKTLVSLGGRFELGFFSPGNSNLRYLGIWYKNIPIRTVVWVANREKPINGSSGMLTLNTAGNLVLSQNGTVVWNTTSIKLARNPVAQLLDSGNLVVRNEAEANSEDYMWQSFDYPLDTLISGMKFGWNLKLGQAWRLTSWKSSDDPSPGSLSWGMVLHNYPEFYMMKGQKTLYRLGPWNGRSFSGLTNLGVNPIFDFKYFRSKDEIFYRYSLVNESLISRIVINETTSKYYLYVWVEGEQNWKEYNSLPAENCDTYALCGAYGNCMNTQLQVCQCLKGFSPKLPLEWNSSDWSQGCVRNKPLSCNDRDSDGFVKFEGLKVPDTTQTWLDESIDLEECRVKCLNNCSCMAYANSDISGTGSGCVMWFGDLIDLKQYQSGGQDLYIRMQASELESNPQEPESRSKKNIRIIVSTTVAPAIFVVILLSTYLVCRVLRKNISENILTETEHDNERLANDLDIPLFDLPTIVSATDDFSMRNKIGQGGFGPVYRGLLVNGQEIAVKTLSSSSGQGLTEFVNEVKLIAKLQHRNLVKLLGCCIEGHENMLVYEYMPNGSLDSFIFDDTKGKLLSWPQRFNIIRGIARGLMYLHQDSRLRIIHRDLKASNVLLDENLNPKISDFGMAKTFGGDQTQGNTNRIVGTHGYMAPEYAVDGLFSVKSDAFSFGILLLEVLCGNRNRAYYHTDNTLNLVGQAWKMWKENRAIELIHPNLRVSYVESEVLRCMHVSLLCVQQQPDDRPTMHSVILMLDSEMELVHPKEPGFISKHVSTEVDSTDKSSTNEVTISLINPR 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03808 829 Pfam Protein tyrosine and serine/threonine kinase 518 784 IPR001245 GO:0004672|GO:0006468
Pste1g03808 829 ProSiteProfiles PAN/Apple domain profile. 347 430 IPR003609 -
Pste1g03808 829 Pfam D-mannose binding lectin 80 184 IPR001480 -
Pste1g03808 829 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Pste1g03808 829 CDD B_lectin 38 158 IPR001480 -
Pste1g03808 829 PIRSF SRK 3 829 IPR024171 GO:0004674
Pste1g03808 829 Gene3D - 28 155 IPR036426 -
Pste1g03808 829 SMART ntp_6 350 429 IPR003609 -
Pste1g03808 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Pste1g03808 829 Gene3D Phosphorylase Kinase; domain 1 477 591 - -
Pste1g03808 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 480 591 - -
Pste1g03808 829 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 22 778 - -
Pste1g03808 829 SMART serkin_6 516 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03808 829 SMART blect_4 38 158 IPR001480 -
Pste1g03808 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 346 429 - -
Pste1g03808 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 28 155 - -
Pste1g03808 829 CDD STKc_IRAK 522 788 - -
Pste1g03808 829 ProSiteProfiles Bulb-type lectin domain profile. 32 152 IPR001480 -
Pste1g03808 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 592 795 - -
Pste1g03808 829 Gene3D Transferase(Phosphotransferase) domain 1 592 798 - -
Pste1g03808 829 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 189 IPR036426 -
Pste1g03808 829 CDD PAN_AP_plant 344 428 - -
Pste1g03808 829 Pfam PAN-like domain 347 415 IPR003609 -
Pste1g03808 829 Pfam S-locus glycoprotein domain 216 325 IPR000858 GO:0048544
Pste1g03808 829 ProSiteProfiles Protein kinase domain profile. 516 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03808 829 SUPERFAMILY Protein kinase-like (PK-like) 500 787 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03808 Pste-Chr1 18880513 18884096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03808 441 829 Receptor kinase-like Gene Family AT4G05200 46.173 1.54e-121 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03808 PK_Tyr_Ser-Thr 2.7e-52 CL0016