Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03806 CTAAAAAATAAGCCCACCACGTTATATGAACAGGAAGGAAAGGATAGAGGTGTTGATGACAGTTCTCAAACAGACACTGATCGATTTGTCAAATATGTAGGACTGAAAGTTGCAGATACCACATATACTTGGTTGGATGAGACCGTTGGTCTAGAGGAATGCAGACTCAAGTGCTTGAATAATTGCTCTTTTATGGCTTATGCTAATTCAGACATAAGAGGAGCAGGTAGTGGATGTGTCTTGTGGTTTGGTGATTTGATTGACATCAAACAGTATCAATCTGGCGGGCAAGATCTATTTATCCGAATGCAAGCTTCAGAGTTAGAACCCAACCCTCTAGAGCATGAACATAGGAGCAAAAGGGAAATTAGAGTTATAGTTGCTACCACCATTGCTGCAATTTGTGTGGTTCTTTTACTGAGTACTTACTTGATTTGTCGAGTTCAGAGGAGGATTAATTCATTGACAGAAACAGACCATAACAATAAAAGACATGTAAACGATCTGGATATCCCATTGTTTGATTTGCCAACAATTGTTGCTGCCACAAATGACTTCTCAATTCAAAATAAGATTGGTCAAGGTGGTTTCGGACCTGTATACAGGGGAATACTAGTGAATGGTCAAGAAATTGCTGTGAAGACTCTATCAAGGAGCACAGGACAAGGATTGACAGAGTTTGTAAATGAAGTAAAATTGATCGCAAAGGTTCAGCATCGAAATCTTGTAAAGCTTCTTGGTTGTAGCATTGAAGGACAGGAAAATATGTTAGTTTATGAATACATGCCAAATGGCAGCCTAGACTCTTTCATTTTCAAAACATACATATTTCCATTGAACAAACCAGATGACGCCAAAGCTAAATTGATAAGTTGGTCTCAGCGCTTCCGCATAATCATAATGTTGCTTGATGAAAATTTGAATCCAAAAATATCAGATTTTGGAATGGCCAAAACCTTTGGAGGAGACCAGACTCAAGGAAACACAAATAGAATAGTTGGAATTCACTTTGGCATTGTACTGTTGGAGATTATATGTGGCAATAGAAATAGAGCATACTATCACACAGATAACACTCTTAATCTTGTTGATCAGGCATGGAAAATGTTGAAAGAGAATAGAGCTATAGAATTGGTCTATTCAAACATAAGGGACTCGTACATTGCATCAGAAGTATTGCGTTGCATGCATGTTAGTCTCTTATGCGTGCAGCAGCACCCAGATGATAGACCTACCATGCACTCCGTGATACTAATGGAATTAGTTGAGCCTAAAGAACCTGGTTTCATTTTGAAAAAAATTTCAACTGAAGTGGATTTAATGGGCAAGAGTTCAACCAAC 1341 0.3833 LKNKPTTLYEQEGKDRGVDDSSQTDTDRFVKYVGLKVADTTYTWLDETVGLEECRLKCLNNCSFMAYANSDIRGAGSGCVLWFGDLIDIKQYQSGGQDLFIRMQASELEPNPLEHEHRSKREIRVIVATTIAAICVVLLLSTYLICRVQRRINSLTETDHNNKRHVNDLDIPLFDLPTIVAATNDFSIQNKIGQGGFGPVYRGILVNGQEIAVKTLSRSTGQGLTEFVNEVKLIAKVQHRNLVKLLGCSIEGQENMLVYEYMPNGSLDSFIFKTYIFPLNKPDDAKAKLISWSQRFRIIIMLLDENLNPKISDFGMAKTFGGDQTQGNTNRIVGIHFGIVLLEIICGNRNRAYYHTDNTLNLVDQAWKMLKENRAIELVYSNIRDSYIASEVLRCMHVSLLCVQQHPDDRPTMHSVILMELVEPKEPGFILKKISTEVDLMGKSSTN 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03806 447 Pfam Protein tyrosine and serine/threonine kinase 187 274 IPR001245 GO:0004672|GO:0006468
Pste1g03806 447 Gene3D Phosphorylase Kinase; domain 1 147 261 - -
Pste1g03806 447 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 24 299 - -
Pste1g03806 447 Pfam PAN-like domain 25 89 IPR003609 -
Pste1g03806 447 ProSiteProfiles PAN/Apple domain profile. 24 104 IPR003609 -
Pste1g03806 447 ProSiteProfiles Protein kinase domain profile. 186 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03806 447 MobiDBLite consensus disorder prediction 1 23 - -
Pste1g03806 447 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 150 261 - -
Pste1g03806 447 SMART ntp_6 24 103 IPR003609 -
Pste1g03806 447 CDD PAN_AP_plant 21 102 - -
Pste1g03806 447 SUPERFAMILY Protein kinase-like (PK-like) 160 417 IPR011009 -
Pste1g03806 447 Gene3D Transferase(Phosphotransferase) domain 1 336 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03806 Pste-Chr1 18864854 18867227 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03806 125 429 Receptor kinase-like Gene Family AT4G23230 41.061 7.33e-77 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03806 PK_Tyr_Ser-Thr 3.2e-18 CL0016